Experiment set27S702 for Pseudomonas simiae WCS417

Compare to:

TIme6-nophage

200 most important genes:

  gene name fitness t score description  
PS417_02510 -6.1 -6.8 ATP phosphoribosyltransferase regulatory subunit compare
PS417_01855 -5.4 -3.3 phosphoribosyl-AMP cyclohydrolase compare
PS417_01575 -5.0 -4.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_04420 -4.6 -10.3 histidinol dehydrogenase compare
PS417_04415 -4.5 -9.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_01565 -4.1 -3.0 imidazole glycerol phosphate synthase compare
PS417_23910 -3.9 -4.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PS417_01850 -3.9 -5.7 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_23995 -3.9 -1.5 preprotein translocase subunit SecG compare
PS417_01570 -3.9 -2.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_11705 -3.9 -4.4 cyclic peptide transporter compare
PS417_23915 -3.8 -2.6 pantoate--beta-alanine ligase compare
PS417_23810 -3.6 -10.0 acetolactate synthase 3 catalytic subunit compare
PS417_23545 -3.6 -2.5 gamma-glutamyl kinase compare
PS417_23805 -3.5 -6.7 acetolactate synthase 3 regulatory subunit compare
PS417_23950 -3.4 -2.2 polynucleotide phosphorylase/polyadenylase compare
PS417_05595 -3.4 -10.3 ornithine carbamoyltransferase compare
PS417_26995 -3.3 -7.3 phosphoserine phosphatase compare
PS417_23800 -3.2 -14.0 ketol-acid reductoisomerase compare
PS417_00185 -2.9 -4.8 tryptophan synthase subunit beta compare
PS417_27040 -2.9 -1.7 3-phosphoglycerate dehydrogenase compare
PS417_26890 -2.9 -8.4 dihydroxy-acid dehydratase compare
PS417_27195 -2.8 -1.4 N-acetylglutamate synthase compare
PS417_18600 -2.7 -4.9 isopropylmalate isomerase compare
PS417_25720 -2.7 -6.5 anthranilate synthase component II compare
PS417_01580 -2.6 -1.2 imidazole glycerol phosphate synthase compare
PS417_25725 -2.6 -14.4 anthranilate synthase component I compare
PS417_18560 -2.6 -7.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_24935 -2.5 -1.4 hypothetical protein compare
PS417_00180 -2.4 -2.8 tryptophan synthase subunit alpha compare
PS417_24745 -2.4 -1.6 gamma-glutamyl phosphate reductase compare
PS417_19800 -2.4 -4.3 flagellar motor switch protein FliG compare
PS417_19755 -2.2 -2.7 flagellar motor switch protein FliM compare
PS417_20125 -2.2 -2.9 phosphoribosylglycinamide formyltransferase compare
PS417_19805 -2.2 -6.2 flagellar M-ring protein FliF compare
PS417_25715 -2.1 -4.6 anthranilate phosphoribosyltransferase compare
PS417_26740 -2.1 -10.3 homoserine acetyltransferase compare
PS417_18585 -2.1 -5.1 3-isopropylmalate dehydrogenase compare
PS417_12855 -2.0 -4.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_01560 -2.0 -2.5 imidazoleglycerol-phosphate dehydratase compare
PS417_18595 -2.0 -4.3 3-isopropylmalate dehydratase compare
PS417_20160 -2.0 -3.1 cysteine synthase compare
PS417_27835 -2.0 -8.5 endoribonuclease compare
PS417_19675 -1.9 -2.9 chemotaxis protein CheY compare
PS417_02415 -1.8 -2.1 phosphoserine phosphatase compare
PS417_24500 -1.8 -3.2 DEAD/DEAH box helicase compare
PS417_04380 -1.8 -1.1 ABC transporter permease compare
PS417_27870 -1.8 -2.6 ATP-dependent DNA helicase RecG compare
PS417_14980 -1.7 -1.6 universal stress protein UspA compare
PS417_16465 -1.7 -7.5 sirohydrochlorin ferrochelatase compare
PS417_15540 -1.6 -1.7 NUDIX hydrolase compare
PS417_26745 -1.6 -5.1 methionine biosynthesis protein MetW compare
PS417_08220 -1.6 -0.8 epimerase compare
PS417_18530 -1.6 -4.4 O-succinylhomoserine sulfhydrylase compare
PS417_12290 -1.6 -6.8 sulfite reductase compare
PS417_23110 -1.6 -6.2 2-isopropylmalate synthase compare
PS417_00355 -1.5 -3.2 metal ABC transporter permease compare
PS417_02280 -1.5 -1.8 GlcNAc-PI de-N-acetylase compare
PS417_04650 -1.5 -0.8 D-alanine--D-alanine ligase compare
PS417_06680 -1.4 -4.3 nuclease PIN compare
PS417_06375 -1.4 -0.5 deoxycytidine triphosphate deaminase compare
PS417_19835 -1.4 -1.5 flagellar biosynthesis protein FliS compare
PS417_19850 -1.4 -7.6 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_16555 -1.4 -1.3 cupin compare
PS417_10060 -1.4 -1.8 hypothetical protein compare
PS417_21105 -1.3 -7.1 aminodeoxychorismate synthase compare
PS417_27135 -1.3 -0.8 glutamine synthetase compare
PS417_23370 -1.3 -4.1 protoheme IX farnesyltransferase compare
PS417_02210 -1.3 -5.2 diguanylate cyclase compare
PS417_19350 -1.3 -3.2 GTP cyclohydrolase compare
PS417_15100 -1.3 -1.9 BatB protein compare
PS417_24525 -1.3 -2.3 nuclease compare
PS417_08200 -1.2 -2.6 hypothetical protein compare
PS417_28140 -1.2 -2.7 asparaginase compare
PS417_20025 -1.2 -1.9 alpha-ribazole phosphatase compare
PS417_27815 -1.2 -1.6 hypothetical protein compare
PS417_17610 -1.2 -1.8 AsnC family transcriptional regulator compare
PS417_21630 -1.2 -1.5 magnesium transporter compare
PS417_03515 -1.1 -1.8 type III secretion protein compare
PS417_27795 -1.1 -0.4 orotate phosphoribosyltransferase compare
PS417_17240 -1.1 -2.3 trigger factor compare
PS417_08125 -1.1 -0.4 prephenate dehydratase compare
PS417_01950 -1.1 -3.8 malate dehydrogenase compare
PS417_05065 -1.1 -2.2 hypothetical protein compare
PS417_21425 -1.1 -1.7 4-amino-4-deoxychorismate lyase compare
PS417_23385 -1.1 -5.8 cytochrome o ubiquinol oxidase subunit I compare
PS417_08025 -1.1 -1.3 acetylornithine aminotransferase compare
PS417_16490 -1.1 -1.0 cell division protein FtsK compare
PS417_26420 -1.0 -1.7 hypothetical protein compare
PS417_25990 -1.0 -4.7 malonyl-CoA O-methyltransferase compare
PS417_03300 -1.0 -2.6 alanine acetyltransferase compare
PS417_10425 -1.0 -1.2 hypothetical protein compare
PS417_18400 -1.0 -3.1 D-ribose ABC transporter, ATPase component RbsA (from data) compare
PS417_23390 -1.0 -4.3 ubiquinol oxidase subunit II compare
PS417_21510 -1.0 -1.5 histidine kinase compare
PS417_00705 -1.0 -1.4 MarR family transcriptional regulator compare
PS417_01620 -1.0 -1.0 preprotein translocase subunit SecB compare
PS417_19200 -1.0 -2.5 fumarate hydratase compare
PS417_26005 -1.0 -5.3 biotin synthase compare
PS417_25985 -1.0 -1.9 dethiobiotin synthetase compare
PS417_01030 -1.0 -1.6 glutamine ABC transporter substrate-binding protein compare
PS417_22570 -0.9 -0.8 H-NS histone compare
PS417_15770 -0.9 -1.2 pyridoxine 5'-phosphate oxidase compare
PS417_23580 -0.9 -1.2 peptidylprolyl isomerase compare
PS417_02270 -0.9 -2.2 carbamoyltransferase compare
PS417_10040 -0.9 -1.0 MFS transporter compare
PS417_04425 -0.9 -4.2 histidinol-phosphate aminotransferase compare
PS417_12375 -0.9 -1.4 serine/threonine protein phosphatase compare
PS417_21595 -0.9 -3.6 flagellar biosynthesis protein FlgN compare
PS417_07870 -0.9 -2.0 hypothetical protein compare
PS417_19665 -0.9 -2.9 flagellar motor protein MotD compare
PS417_19840 -0.9 -5.2 flagellar cap protein FliD compare
PS417_27290 -0.8 -1.5 hypothetical protein compare
PS417_15370 -0.8 -2.2 kinase compare
PS417_07560 -0.8 -1.2 universal stress protein UspA compare
PS417_01115 -0.8 -1.7 serine acetyltransferase compare
PS417_21125 -0.8 -1.8 phosphoadenosine phosphosulfate reductase compare
PS417_18930 -0.8 -1.4 restriction endonuclease subunit S compare
PS417_23375 -0.8 -1.5 cytochrome C oxidase compare
PS417_19860 -0.8 -6.2 flagellar hook protein FlgL compare
PS417_06245 -0.8 -1.0 zinc metallopeptidase RseP compare
PS417_28230 -0.8 -1.6 transcriptional regulator compare
PS417_24630 -0.8 -1.2 ATP-binding protein compare
PS417_08540 -0.8 -1.7 RNA helicase compare
PS417_06635 -0.8 -1.1 ferredoxin compare
PS417_26540 -0.8 -4.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PS417_22690 -0.8 -1.9 phosphogluconate dehydratase compare
PS417_09210 -0.7 -0.9 TetR family transcriptional regulator compare
PS417_22315 -0.7 -2.1 DNA-3-methyladenine glycosylase compare
PS417_15955 -0.7 -1.3 secretion protein HylD compare
PS417_18590 -0.7 -2.2 SAM-dependent methyltransferase compare
PS417_13185 -0.7 -1.4 RND transporter compare
PS417_24580 -0.7 -3.1 pseudouridine synthase compare
PS417_22945 -0.7 -1.4 phosphoribosylglycinamide formyltransferase compare
PS417_18105 -0.7 -0.7 iron-dicitrate transporter substrate-binding subunit compare
PS417_15400 -0.7 -1.2 hypothetical protein compare
PS417_22640 -0.7 -2.3 cytochrome C biogenesis protein CcmE compare
PS417_26685 -0.7 -1.5 hypothetical protein compare
PS417_05820 -0.7 -1.9 recombinase RecX compare
PS417_11830 -0.7 -1.4 membrane protein compare
PS417_00975 -0.7 -0.9 hypothetical protein compare
PS417_01875 -0.7 -1.6 polyhydroxyalkanoic acid system protein compare
PS417_09575 -0.7 -2.1 glutathione S-transferase compare
PS417_27380 -0.7 -1.2 GntR family transcriptional regulator compare
PS417_19740 -0.7 -4.6 flagellar biosynthesis protein flip compare
PS417_09420 -0.7 -1.4 LysR family transcriptional regulator compare
PS417_26155 -0.7 -1.4 hypothetical protein compare
PS417_10715 -0.7 -1.6 Cro/Cl family transcriptional regulator compare
PS417_07615 -0.7 -2.5 TetR family transcriptional regulator compare
PS417_07710 -0.7 -2.0 membrane protein compare
PS417_26725 -0.7 -2.6 hypothetical protein compare
PS417_06710 -0.7 -1.3 beta-ketoadipyl CoA thiolase compare
PS417_16665 -0.7 -1.3 hypothetical protein compare
PS417_16495 -0.7 -1.8 leucyl/phenylalanyl-tRNA--protein transferase compare
PS417_18540 -0.7 -1.5 colicin V production CvpA compare
PS417_06150 -0.7 -1.8 SAM-dependent methlyltransferase compare
PS417_27425 -0.7 -3.8 exopolyphosphatase compare
PS417_24530 -0.7 -2.7 ABC transporter substrate-binding protein compare
PS417_08225 -0.7 -2.4 acetolactate synthase compare
PS417_17125 -0.7 -2.0 transcriptional regulator compare
PS417_05575 -0.7 -4.2 Glycerol kinase (EC 2.7.1.30) (from data) compare
PS417_01290 -0.7 -1.1 ADP-ribose diphosphatase compare
PS417_28325 -0.7 -1.7 phosphoribosyl-AMP cyclohydrolase compare
PS417_08990 -0.6 -2.2 ABC transporter substrate-binding protein compare
PS417_08685 -0.6 -0.9 flagellar hook-length control protein FliK compare
PS417_26990 -0.6 -0.6 RNA pyrophosphohydrolase compare
PS417_21085 -0.6 -2.2 GntR family transcriptional regulator compare
PS417_16645 -0.6 -1.4 XRE family transcriptional regulator compare
PS417_26000 -0.6 -2.8 8-amino-7-oxononanoate synthase compare
PS417_03100 -0.6 -0.8 pilus assembly protein compare
PS417_00080 -0.6 -4.0 potassium transporter peripheral membrane component compare
PS417_04170 -0.6 -3.0 stringent starvation protein A compare
PS417_22060 -0.6 -0.9 hypothetical protein compare
PS417_10015 -0.6 -0.7 hypothetical protein compare
PS417_18040 -0.6 -1.0 general secretion pathway protein GspN compare
PS417_17000 -0.6 -1.3 MerR family transcriptional regulator compare
PS417_21325 -0.6 -1.9 arabinose ABC transporter permease compare
PS417_02070 -0.6 -0.8 membrane protein compare
PS417_04410 -0.6 -0.7 hypothetical protein compare
PS417_23360 -0.6 -0.8 hypothetical protein compare
PS417_05865 -0.6 -1.4 hypothetical protein compare
PS417_08580 -0.6 -2.5 histidine kinase compare
PS417_18630 -0.6 -1.5 tRNA-dihydrouridine synthase C compare
PS417_28225 -0.6 -1.0 hypothetical protein compare
PS417_20705 -0.6 -1.7 cbb3-type cytochrome c oxidase subunit II compare
PS417_15705 -0.6 -1.3 nitrate reductase compare
PS417_11925 -0.6 -1.1 hypothetical protein compare
PS417_14590 -0.6 -0.9 LysR family transcriptional regulator compare
PS417_12310 -0.6 -2.6 methionine synthase compare
PS417_20620 -0.6 -1.8 glycosyl transferase family 2 compare
PS417_11195 -0.6 -2.2 NAD(P)H-quinone oxidoreductase compare
PS417_13850 -0.6 -2.5 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) compare
PS417_11700 -0.6 -3.5 ligand-gated channel compare
PS417_15865 -0.6 -1.7 hypothetical protein compare
PS417_04115 -0.6 -2.2 alpha/beta hydrolase compare
PS417_23855 -0.6 -0.9 ABC transporter substrate-binding protein compare
PS417_05560 -0.6 -1.5 ABC transporter compare
PS417_02975 -0.6 -1.8 3-dehydroquinate dehydratase compare
PS417_09885 -0.6 -2.6 hypothetical protein compare
PS417_19655 -0.6 -2.0 chemotaxis protein CheW compare


Specific Phenotypes

None in this experiment

For Pseudomonas simiae WCS417 in nophagecontrol experiments