Experiment set26S604 for Pseudomonas simiae WCS417

Compare to:

NaCl stress 250 mM

200 most important genes:

  gene name fitness t score description  
PS417_20785 -3.0 -2.0 transcriptional regulator compare
PS417_22565 -2.1 -0.7 formyltetrahydrofolate deformylase compare
PS417_23770 -2.0 -1.3 exodeoxyribonuclease V subunit alpha compare
PS417_01620 -2.0 -3.5 preprotein translocase subunit SecB compare
PS417_19425 -1.8 -1.5 allantoicase compare
PS417_20775 -1.7 -3.0 coproporphyrinogen III oxidase compare
PS417_02720 -1.7 -1.5 TetR family transcriptional regulator compare
PS417_01580 -1.6 -2.3 imidazole glycerol phosphate synthase compare
PS417_23545 -1.5 -2.2 gamma-glutamyl kinase compare
PS417_02880 -1.4 -0.7 copper chaperone compare
PS417_24500 -1.4 -4.4 DEAD/DEAH box helicase compare
PS417_27245 -1.3 -3.1 aminotransferase DegT compare
PS417_22520 -1.3 -1.9 histidine kinase compare
PS417_01915 -1.2 -0.4 ATP-dependent protease ATP-binding subunit HslU compare
PS417_17565 -1.2 -4.3 branched-chain amino acid aminotransferase compare
PS417_02870 -1.2 -4.0 TonB-dependent receptor compare
PS417_04025 -1.2 -4.3 glycine/betaine ABC transporter permease conserved
PS417_24745 -1.2 -2.3 gamma-glutamyl phosphate reductase compare
PS417_04010 -1.1 -5.7 glycine/betaine ABC transporter ATP-binding protein conserved
PS417_00185 -1.1 -1.8 tryptophan synthase subunit beta compare
PS417_27300 -1.1 -0.7 cell division protein ZapA compare
PS417_07170 -1.1 -3.1 hypothetical protein compare
PS417_19275 -1.1 -1.3 hypothetical protein compare
PS417_02485 -1.0 -1.7 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_06395 -1.0 -2.7 amino acid transporter compare
PS417_17550 -1.0 -4.1 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) compare
PS417_06680 -1.0 -3.7 nuclease PIN compare
PS417_21630 -1.0 -1.6 magnesium transporter compare
PS417_18560 -1.0 -4.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_22990 -1.0 -2.0 iron dicitrate transport regulator FecR compare
PS417_04020 -1.0 -6.3 glycine/betaine ABC transporter substrate-binding protein conserved
PS417_01575 -0.9 -2.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_25710 -0.9 -1.3 indole-3-glycerol-phosphate synthase compare
PS417_27535 -0.9 -4.9 chemotaxis protein CheY compare
PS417_01715 -0.9 -1.6 hypothetical protein compare
PS417_25715 -0.9 -3.9 anthranilate phosphoribosyltransferase compare
PS417_10995 -0.9 -3.0 GntR family transcriptional regulator compare
PS417_24615 -0.9 -0.8 hypothetical protein compare
PS417_22450 -0.9 -0.7 ATP-dependent DNA helicase RuvA compare
PS417_02630 -0.9 -2.7 NAD synthetase compare
PS417_10985 -0.9 -1.2 NADH:flavin oxidoreductase compare
PS417_02560 -0.9 -1.0 23S rRNA methyltransferase compare
PS417_07000 -0.9 -4.1 hypothetical protein compare
PS417_10265 -0.9 -2.5 peptidase compare
PS417_25790 -0.9 -2.9 aminoglycoside phosphotransferase compare
PS417_05235 -0.9 -2.2 peptidase inhibitor I42 compare
PS417_21320 -0.8 -2.8 transcriptional regulator compare
PS417_02415 -0.8 -2.5 phosphoserine phosphatase compare
PS417_25725 -0.8 -6.1 anthranilate synthase component I compare
PS417_08410 -0.8 -1.8 hypothetical protein compare
PS417_13990 -0.8 -2.0 LysR family transcriptional regulator compare
PS417_01145 -0.8 -1.0 taurine transporter ATP-binding subunit compare
PS417_19095 -0.8 -1.5 hypothetical protein compare
PS417_07710 -0.8 -1.2 membrane protein compare
PS417_09745 -0.8 -3.1 peptide ABC transporter substrate-binding protein compare
PS417_25780 -0.8 -2.2 molecular chaperone DnaJ compare
PS417_25650 -0.8 -1.7 anhydro-N-acetylmuramic acid kinase compare
PS417_22570 -0.8 -0.5 H-NS histone compare
PS417_16855 -0.8 -1.2 cation:proton antiporter compare
PS417_12755 -0.8 -2.0 RND transporter compare
PS417_01855 -0.8 -1.4 phosphoribosyl-AMP cyclohydrolase compare
PS417_08540 -0.8 -1.6 RNA helicase compare
PS417_18310 -0.7 -0.4 hypothetical protein compare
PS417_01560 -0.7 -1.4 imidazoleglycerol-phosphate dehydratase compare
PS417_23830 -0.7 -5.0 hypothetical protein compare
PS417_26345 -0.7 -3.1 choline dehydrogenase compare
PS417_20915 -0.7 -1.8 hypothetical protein compare
PS417_02225 -0.7 -1.2 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_17545 -0.7 -2.3 2-oxoisovalerate dehydrogenase compare
PS417_18595 -0.7 -1.9 3-isopropylmalate dehydratase compare
PS417_05165 -0.7 -1.7 cytosol aminopeptidase compare
PS417_11480 -0.7 -2.9 hypothetical protein compare
PS417_20700 -0.7 -3.5 cbb3-type cytochrome c oxidase subunit I compare
PS417_05570 -0.7 -2.6 DeoR faimly transcriptional regulator compare
PS417_21210 -0.7 -1.4 amidotransferase compare
PS417_20705 -0.7 -0.5 cbb3-type cytochrome c oxidase subunit II compare
PS417_04290 -0.7 -2.3 hypothetical protein compare
PS417_12515 -0.7 -1.8 lactate dehydrogenase compare
PS417_27795 -0.7 -0.2 orotate phosphoribosyltransferase compare
PS417_01585 -0.7 -3.6 amino acid ABC transporter substrate-binding protein compare
PS417_10040 -0.7 -1.0 MFS transporter compare
PS417_17440 -0.7 -1.2 beta-lactamase compare
PS417_04595 -0.7 -1.1 cell division protein MraZ compare
PS417_13735 -0.7 -1.3 hypothetical protein compare
PS417_16555 -0.7 -0.7 cupin compare
PS417_20755 -0.7 -3.0 membrane protein compare
PS417_07560 -0.7 -0.9 universal stress protein UspA compare
PS417_20030 -0.7 -1.9 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PS417_16810 -0.7 -2.1 acyl-CoA dehydrogenase compare
PS417_18055 -0.7 -1.1 general secretion pathway protein GspK compare
PS417_05160 -0.7 -1.1 DNA polymerase III subunit chi compare
PS417_15895 -0.7 -2.0 iron dicitrate transport regulator FecR compare
PS417_00160 -0.7 -1.9 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
PS417_26340 -0.7 -3.0 betaine-aldehyde dehydrogenase compare
PS417_11400 -0.7 -1.2 phosphoglycerate mutase compare
PS417_18690 -0.7 -2.7 aromatic amino acid aminotransferase compare
PS417_03935 -0.7 -1.6 N-acetyl-anhydromuranmyl-L-alanine amidase compare
PS417_16990 -0.7 -3.1 acyl-CoA dehydrogenase compare
PS417_26685 -0.7 -1.8 hypothetical protein compare
PS417_14240 -0.6 -2.2 isochorismatase compare
PS417_04015 -0.6 -2.0 choline ABC transporter permease conserved
PS417_04420 -0.6 -4.3 histidinol dehydrogenase compare
PS417_27195 -0.6 -0.8 N-acetylglutamate synthase compare
PS417_16465 -0.6 -3.9 sirohydrochlorin ferrochelatase compare
PS417_00220 -0.6 -0.9 hypothetical protein compare
PS417_18040 -0.6 -1.2 general secretion pathway protein GspN compare
PS417_02915 -0.6 -1.8 precorrin-3B C17-methyltransferase compare
PS417_08680 -0.6 -1.4 flagellar biosynthesis protein FlhB compare
PS417_08530 -0.6 -3.7 spermidine synthase compare
PS417_15705 -0.6 -2.1 nitrate reductase compare
PS417_21430 -0.6 -0.7 3-oxoacyl-ACP synthase compare
PS417_12135 -0.6 -2.1 peptidylprolyl isomerase compare
PS417_04875 -0.6 -1.2 molybdenum cofactor biosynthesis protein MoaE compare
PS417_08135 -0.6 -1.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_22795 -0.6 -1.0 exclusion suppressor FxsA compare
PS417_13625 -0.6 -2.6 cytochrome B561 compare
PS417_18710 -0.6 -3.7 hypothetical protein compare
PS417_06685 -0.6 -0.7 beta-ketoadipyl CoA thiolase compare
PS417_23915 -0.6 -2.4 pantoate--beta-alanine ligase compare
PS417_22195 -0.6 -3.0 peptidase compare
PS417_23995 -0.6 -0.7 preprotein translocase subunit SecG compare
PS417_12310 -0.6 -3.4 methionine synthase compare
PS417_01565 -0.6 -3.1 imidazole glycerol phosphate synthase compare
PS417_20985 -0.6 -0.4 porin compare
PS417_27875 -0.6 -3.7 histidine kinase compare
PS417_25720 -0.6 -3.2 anthranilate synthase component II compare
PS417_17480 -0.6 -2.3 branched-chain amino acid ABC transporter substrate-binding protein compare
PS417_27870 -0.6 -1.1 ATP-dependent DNA helicase RecG compare
PS417_24230 -0.6 -3.3 ATP-dependent protease compare
PS417_11380 -0.6 -2.5 peptidylprolyl isomerase compare
PS417_16055 -0.6 -2.3 biopolymer transporter TolR compare
PS417_24710 -0.6 -2.8 lipoprotein compare
PS417_09440 -0.6 -1.2 MerR family transcriptional regulator compare
PS417_25645 -0.6 -2.4 peptidase M23 compare
PS417_19630 -0.6 -1.4 LuxR family transcriptional regulator compare
PS417_17855 -0.6 -2.0 major facilitator transporter compare
PS417_15760 -0.6 -2.2 molybdenum cofactor biosynthesis protein MoaA compare
PS417_06245 -0.6 -0.6 zinc metallopeptidase RseP compare
PS417_18585 -0.6 -3.3 3-isopropylmalate dehydrogenase compare
PS417_20255 -0.5 -2.7 copper resistance protein CopB compare
PS417_01590 -0.5 -1.3 polysaccharide deacetylase compare
PS417_28030 -0.5 -1.7 hypothetical protein compare
PS417_04500 -0.5 -0.7 hypothetical protein compare
PS417_01570 -0.5 -1.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_16845 -0.5 -1.8 monovalent cation/H+ antiporter subunit E compare
PS417_15915 -0.5 -1.0 hypothetical protein compare
PS417_26125 -0.5 -1.8 glutathione S-transferase compare
PS417_27865 -0.5 -0.9 LysR family transcriptional regulator compare
PS417_00175 -0.5 -0.7 CigR compare
PS417_07400 -0.5 -1.3 hypothetical protein compare
PS417_15775 -0.5 -1.6 short-chain dehydrogenase compare
PS417_02270 -0.5 -1.5 carbamoyltransferase compare
PS417_23580 -0.5 -1.0 peptidylprolyl isomerase compare
PS417_12015 -0.5 -1.7 phosphoglycerate mutase compare
PS417_09995 -0.5 -1.7 regulatory protein compare
PS417_24085 -0.5 -1.2 protein RnfH compare
PS417_12375 -0.5 -1.2 serine/threonine protein phosphatase compare
PS417_14850 -0.5 -2.0 hypothetical protein compare
PS417_01030 -0.5 -1.0 glutamine ABC transporter substrate-binding protein compare
PS417_17865 -0.5 -2.5 2-keto-3-deoxy-L-rhamnonate aldolase compare
PS417_08170 -0.5 -3.1 capsular biosynthesis protein compare
PS417_01710 -0.5 -2.1 histidine utilization repressor compare
PS417_17215 -0.5 -1.0 peptidylprolyl isomerase compare
PS417_06945 -0.5 -0.8 membrane protein compare
PS417_04300 -0.5 -1.6 FagA protein compare
PS417_02975 -0.5 -1.7 3-dehydroquinate dehydratase compare
PS417_27085 -0.5 -1.0 AraC family transcriptional regulator compare
PS417_17125 -0.5 -1.7 transcriptional regulator compare
PS417_11410 -0.5 -1.9 phospholipase compare
PS417_15765 -0.5 -2.2 molybdopterin biosynthesis protein B compare
PS417_26370 -0.5 -1.7 RNA helicase compare
PS417_24580 -0.5 -2.5 pseudouridine synthase compare
PS417_22375 -0.5 -0.5 cold-shock protein compare
PS417_10535 -0.5 -1.9 hypothetical protein compare
PS417_26980 -0.5 -2.4 hypothetical protein compare
PS417_08295 -0.5 -1.5 ATPase compare
PS417_28275 -0.5 -1.7 cobalamin biosynthesis protein CobW compare
PS417_17160 -0.5 -0.9 1-aminocyclopropane-1-carboxylate deaminase compare
PS417_12845 -0.5 -1.4 NAD(P)H dehydrogenase compare
PS417_15480 -0.5 -0.9 ABC transporter substrate-binding protein compare
PS417_11175 -0.5 -1.4 AraC family transcriptional regulator compare
PS417_25175 -0.5 -1.5 hypothetical protein compare
PS417_11545 -0.5 -2.5 spermidine/putrescine ABC transporter substrate-binding protein compare
PS417_08740 -0.5 -1.5 ribose-phosphate pyrophosphokinase compare
PS417_14580 -0.5 -1.9 saccharopine dehydrogenase compare
PS417_02890 -0.5 -1.4 cobalt-precorrin-6X reductase compare
PS417_22340 -0.5 -1.2 carbamate kinase compare
PS417_17845 -0.5 -1.9 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
PS417_12325 -0.5 -2.4 precorrin-4 C11-methyltransferase compare
PS417_11535 -0.5 -1.7 nicotinate phosphoribosyltransferase compare
PS417_22060 -0.5 -0.8 hypothetical protein compare
PS417_08990 -0.5 -2.3 ABC transporter substrate-binding protein compare
PS417_20140 -0.5 -1.4 nucleoprotein/polynucleotide-associated enzyme compare
PS417_23455 -0.5 -1.8 LrgA compare
PS417_05575 -0.5 -3.2 Glycerol kinase (EC 2.7.1.30) (from data) compare
PS417_10480 -0.5 -1.4 glutathione S-transferase compare
PS417_10125 -0.5 -1.9 hypothetical protein compare
PS417_23015 -0.5 -1.9 NGG1p interacting factor 3 protein, NIF3 compare
PS417_11100 -0.5 -1.4 MocE compare
PS417_04590 -0.5 -2.0 methyltransferase compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium Chloride in Pseudomonas simiae WCS417

For stress Sodium Chloride across organisms