Experiment set26S600 for Pseudomonas simiae WCS417

Compare to:

LB_noSalt 30C

200 most important genes:

  gene name fitness t score description  
PS417_20785 -3.1 -2.1 transcriptional regulator compare
PS417_02885 -3.1 -2.1 hypothetical protein compare
PS417_19835 -2.4 -1.9 flagellar biosynthesis protein FliS compare
PS417_27195 -2.0 -2.0 N-acetylglutamate synthase compare
PS417_24710 -2.0 -5.9 lipoprotein compare
PS417_06375 -2.0 -0.6 deoxycytidine triphosphate deaminase compare
PS417_23770 -1.8 -1.7 exodeoxyribonuclease V subunit alpha compare
PS417_20775 -1.8 -2.2 coproporphyrinogen III oxidase compare
PS417_02870 -1.8 -6.0 TonB-dependent receptor compare
PS417_22815 -1.7 -4.1 permease compare
PS417_20855 -1.6 -1.3 hypothetical protein compare
PS417_06530 -1.5 -1.9 membrane protein compare
PS417_07140 -1.5 -2.4 peptidase M48 compare
PS417_28070 -1.4 -6.3 phosphate ABC transporter ATP-binding protein compare
PS417_23545 -1.4 -2.3 gamma-glutamyl kinase compare
PS417_23580 -1.4 -1.8 peptidylprolyl isomerase compare
PS417_27585 -1.4 -2.5 diaminopimelate epimerase compare
PS417_16555 -1.4 -2.1 cupin compare
PS417_22445 -1.4 -3.1 ATP-dependent DNA helicase RuvB compare
PS417_08540 -1.3 -2.4 RNA helicase compare
PS417_22520 -1.3 -1.5 histidine kinase compare
PS417_14065 -1.3 -4.9 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_17215 -1.3 -1.6 peptidylprolyl isomerase compare
PS417_01915 -1.2 -0.4 ATP-dependent protease ATP-binding subunit HslU compare
PS417_25650 -1.2 -2.0 anhydro-N-acetylmuramic acid kinase compare
PS417_01605 -1.2 -0.7 phosphoglycerate mutase compare
PS417_28080 -1.1 -8.4 phosphate ABC transporter permease compare
PS417_04875 -1.1 -1.6 molybdenum cofactor biosynthesis protein MoaE compare
PS417_00180 -1.1 -1.2 tryptophan synthase subunit alpha compare
PS417_16520 -1.1 -1.6 cold-shock protein compare
PS417_12695 -1.1 -5.0 mannitol dehydrogenase compare
PS417_11485 -1.0 -2.1 AraC family transcriptional regulator compare
PS417_22570 -1.0 -0.6 H-NS histone compare
PS417_24370 -1.0 -1.0 (2Fe-2S)-binding protein compare
PS417_27245 -1.0 -1.8 aminotransferase DegT compare
PS417_00375 -1.0 -1.8 membrane protein compare
PS417_00085 -1.0 -2.7 16S rRNA methyltransferase compare
PS417_24615 -1.0 -0.8 hypothetical protein compare
PS417_27300 -1.0 -0.7 cell division protein ZapA compare
PS417_16990 -1.0 -4.9 acyl-CoA dehydrogenase compare
PS417_24745 -0.9 -2.0 gamma-glutamyl phosphate reductase compare
PS417_17565 -0.9 -2.8 branched-chain amino acid aminotransferase compare
PS417_06680 -0.9 -3.7 nuclease PIN compare
PS417_03260 -0.9 -0.8 5S ribosomal RNA compare
PS417_08155 -0.9 -0.9 integration host factor subunit beta compare
PS417_10675 -0.9 -1.3 TetR family transcriptional regulator compare
PS417_07820 -0.9 -2.6 transposase compare
PS417_11705 -0.9 -3.4 cyclic peptide transporter compare
PS417_16510 -0.9 -1.9 Clp protease ClpX compare
PS417_08090 -0.9 -0.6 3-oxoacyl-ACP reductase compare
PS417_04800 -0.9 -2.3 alginate O-acetyltransferase compare
PS417_07170 -0.9 -2.8 hypothetical protein compare
PS417_19860 -0.9 -6.5 flagellar hook protein FlgL compare
PS417_25715 -0.9 -3.5 anthranilate phosphoribosyltransferase compare
PS417_27815 -0.9 -1.3 hypothetical protein compare
PS417_07620 -0.9 -0.8 beta-hexosaminidase compare
PS417_25790 -0.8 -1.8 aminoglycoside phosphotransferase compare
PS417_12585 -0.8 -4.5 acriflavine resistance protein B compare
PS417_02555 -0.8 -5.4 exoribonuclease R compare
PS417_18310 -0.8 -0.4 hypothetical protein compare
PS417_10245 -0.8 -1.5 hypothetical protein compare
PS417_09235 -0.8 -0.9 molecular chaperone compare
PS417_27595 -0.8 -2.5 recombinase XerC compare
PS417_08620 -0.8 -0.8 hypothetical protein compare
PS417_01575 -0.8 -2.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_19840 -0.8 -4.6 flagellar cap protein FliD compare
PS417_12855 -0.8 -2.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_19850 -0.8 -4.4 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_19865 -0.8 -5.9 flagellar hook protein FlgK compare
PS417_03785 -0.8 -1.0 pilus assembly protein PilV compare
PS417_00065 -0.8 -1.3 3-methyladenine DNA glycosylase compare
PS417_21655 -0.8 -1.0 aspartate kinase compare
PS417_27075 -0.8 -1.0 thiol-disulfide isomerase compare
PS417_00220 -0.8 -1.2 hypothetical protein compare
PS417_23725 -0.7 -1.7 methylmalonate-semialdehyde dehydrogenase compare
PS417_23915 -0.7 -3.5 pantoate--beta-alanine ligase compare
PS417_20700 -0.7 -3.9 cbb3-type cytochrome c oxidase subunit I compare
PS417_05830 -0.7 -1.6 hypothetical protein compare
PS417_19490 -0.7 -2.4 mechanosensitive ion channel protein compare
PS417_23775 -0.7 -1.3 exodeoxyribonuclease V subunit beta compare
PS417_28220 -0.7 -1.7 LysR family transcriptional regulator compare
PS417_25645 -0.7 -2.3 peptidase M23 compare
PS417_20130 -0.7 -4.8 dehydrogenase compare
PS417_08170 -0.7 -3.7 capsular biosynthesis protein compare
PS417_27795 -0.7 -0.2 orotate phosphoribosyltransferase compare
PS417_28085 -0.7 -5.1 phosphate-binding protein compare
PS417_01130 -0.7 -2.4 L-glyceraldehyde 3-phosphate reductase compare
PS417_16665 -0.7 -1.6 hypothetical protein compare
PS417_01990 -0.7 -4.3 cell division protein compare
PS417_21595 -0.7 -2.8 flagellar biosynthesis protein FlgN compare
PS417_02045 -0.7 -1.5 3-oxoacyl-ACP synthase compare
PS417_18560 -0.7 -3.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_27135 -0.7 -0.6 glutamine synthetase compare
PS417_01580 -0.7 -1.0 imidazole glycerol phosphate synthase compare
PS417_01855 -0.7 -1.2 phosphoribosyl-AMP cyclohydrolase compare
PS417_14315 -0.7 -2.1 2,5-dioxovalerate dehydrogenase compare
PS417_02845 -0.7 -2.0 ABC transporter permease compare
PS417_20755 -0.7 -3.2 membrane protein compare
PS417_26370 -0.7 -2.9 RNA helicase compare
PS417_12565 -0.7 -2.2 2-dehydro-3-deoxygluconokinase compare
PS417_23755 -0.7 -1.9 membrane protein compare
PS417_28075 -0.7 -2.7 phosphate ABC transporter permease compare
PS417_01560 -0.7 -1.4 imidazoleglycerol-phosphate dehydratase compare
PS417_12520 -0.7 -1.3 hypothetical protein compare
PS417_19430 -0.7 -2.2 ureidoglycolate hydrolase compare
PS417_19125 -0.6 -2.2 LysR family transcriptional regulator compare
PS417_21690 -0.6 -3.1 N-succinylarginine dihydrolase compare
PS417_23250 -0.6 -2.6 S-adenosylmethionine tRNA ribosyltransferase compare
PS417_13555 -0.6 -2.0 ABC transporter permease compare
PS417_15540 -0.6 -1.1 NUDIX hydrolase compare
PS417_26295 -0.6 -2.1 gamma-butyrobetaine dioxygenase compare
PS417_24500 -0.6 -2.4 DEAD/DEAH box helicase compare
PS417_14010 -0.6 -4.0 multidrug transporter compare
PS417_01600 -0.6 -2.5 peptidase M23 compare
PS417_27040 -0.6 -1.0 3-phosphoglycerate dehydrogenase compare
PS417_02280 -0.6 -0.6 GlcNAc-PI de-N-acetylase compare
PS417_04170 -0.6 -2.4 stringent starvation protein A compare
PS417_07710 -0.6 -1.1 membrane protein compare
PS417_26655 -0.6 -2.7 chemotaxis protein compare
PS417_02770 -0.6 -1.4 membrane protein compare
PS417_06445 -0.6 -1.7 iron-siderophore ABC transporter permease compare
PS417_05820 -0.6 -1.8 recombinase RecX compare
PS417_06395 -0.6 -1.3 amino acid transporter compare
PS417_23310 -0.6 -1.6 glyoxalase compare
PS417_21565 -0.6 -2.4 flagellar basal body rod protein FlgC compare
PS417_22015 -0.6 -1.0 hypothetical protein compare
PS417_04225 -0.6 -1.3 conjugal transfer protein TraR compare
PS417_15090 -0.6 -1.2 hypothetical protein compare
PS417_18440 -0.6 -1.6 hypothetical protein compare
PS417_07375 -0.6 -2.9 ribonuclease D compare
PS417_15520 -0.6 -1.7 hypothetical protein compare
PS417_22410 -0.6 -2.8 hypothetical protein compare
PS417_27875 -0.6 -3.1 histidine kinase compare
PS417_26800 -0.6 -3.5 cell division protein FtsX compare
PS417_22450 -0.6 -0.5 ATP-dependent DNA helicase RuvA compare
PS417_03350 -0.6 -3.1 cytochrome C peroxidase compare
PS417_16195 -0.6 -0.9 AraC family transcriptional regulator compare
PS417_13625 -0.6 -2.4 cytochrome B561 compare
PS417_13800 -0.6 -1.6 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_25725 -0.5 -3.7 anthranilate synthase component I compare
PS417_19805 -0.5 -2.6 flagellar M-ring protein FliF compare
PS417_26085 -0.5 -2.1 peptidase compare
PS417_04420 -0.5 -3.9 histidinol dehydrogenase compare
PS417_11545 -0.5 -2.1 spermidine/putrescine ABC transporter substrate-binding protein compare
PS417_23615 -0.5 -1.2 sulfate transporter compare
PS417_16490 -0.5 -0.8 cell division protein FtsK compare
PS417_20365 -0.5 -1.8 Cro/Cl family transcriptional regulator compare
PS417_18105 -0.5 -1.0 iron-dicitrate transporter substrate-binding subunit compare
PS417_13255 -0.5 -1.2 ABC transporter compare
PS417_12155 -0.5 -1.7 transporter compare
PS417_15465 -0.5 -1.6 carboxynorspermidine decarboxylase compare
PS417_17015 -0.5 -2.1 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) compare
PS417_04060 -0.5 -1.7 dipeptide ABC transporter, permease component (from data) compare
PS417_06200 -0.5 -2.0 protein-PII uridylyltransferase compare
PS417_13145 -0.5 -1.1 50S ribosomal protein L21 compare
PS417_25320 -0.5 -3.3 dTDP-4-dehydrorhamnose reductase compare
PS417_05120 -0.5 -1.5 RNA polymerase subunit sigma-24 compare
PS417_27235 -0.5 -1.3 ribonucleotide reductase compare
PS417_03100 -0.5 -0.6 pilus assembly protein compare
PS417_14755 -0.5 -1.1 UV damage repair endonuclease UvdE compare
PS417_23205 -0.5 -2.4 transcriptional regulator compare
PS417_15770 -0.5 -0.9 pyridoxine 5'-phosphate oxidase compare
PS417_07560 -0.5 -0.8 universal stress protein UspA compare
PS417_01960 -0.5 -1.9 pilus assembly protein compare
PS417_26005 -0.5 -3.3 biotin synthase compare
PS417_01620 -0.5 -1.2 preprotein translocase subunit SecB compare
PS417_06205 -0.5 -3.4 methionine aminopeptidase compare
PS417_27555 -0.5 -1.6 DNA-binding protein compare
PS417_14240 -0.5 -2.0 isochorismatase compare
PS417_00705 -0.5 -0.9 MarR family transcriptional regulator compare
PS417_12135 -0.5 -1.8 peptidylprolyl isomerase compare
PS417_05775 -0.5 -1.6 tail tape measure protein compare
PS417_08050 -0.5 -1.8 amino acid amidase compare
PS417_03560 -0.5 -0.7 GTP-binding protein compare
PS417_06880 -0.5 -1.8 RNA polymerase sigma factor compare
PS417_19765 -0.5 -2.8 flagellar hook-length control protein compare
PS417_19190 -0.5 -2.2 BolA family transcriptional regulator compare
PS417_03430 -0.5 -2.1 methyltransferase type 11 compare
PS417_05445 -0.5 -0.9 DNA mismatch repair protein MutT compare
PS417_17545 -0.5 -1.6 2-oxoisovalerate dehydrogenase compare
PS417_17740 -0.5 -2.1 fatty acid hydroxylase compare
PS417_19725 -0.5 -2.1 flagellar biosynthesis protein FlhB compare
PS417_14875 -0.5 -1.9 polyisoprenoid-binding protein compare
PS417_21430 -0.5 -0.7 3-oxoacyl-ACP synthase compare
PS417_18435 -0.5 -1.0 hypothetical protein compare
PS417_09085 -0.5 -0.9 hypothetical protein compare
PS417_19740 -0.5 -2.6 flagellar biosynthesis protein flip compare
PS417_02270 -0.5 -2.3 carbamoyltransferase compare
PS417_14905 -0.5 -1.8 C4-dicarboxylate ABC transporter compare
PS417_04080 -0.5 -1.1 peptide ABC transporter substrate-binding protein compare
PS417_05345 -0.5 -1.2 exotoxin compare
PS417_02630 -0.5 -1.7 NAD synthetase compare
PS417_16515 -0.5 -1.5 Clp protease ClpS compare
PS417_15745 -0.5 -1.1 lipid carrier protein compare
PS417_27535 -0.5 -2.4 chemotaxis protein CheY compare
PS417_00810 -0.5 -1.1 RNA polymerase sigma factor compare
PS417_23620 -0.5 -1.9 epimerase compare
PS417_23215 -0.5 -1.8 RNA methyltransferase compare
PS417_15955 -0.5 -2.3 secretion protein HylD compare
PS417_00470 -0.4 -2.0 glutamate:protein symporter compare


Specific Phenotypes

For 1 genes in this experiment