| | gene | name | fitness | t score | description | |
|---|
| b1192 | ldcA | -4.3 | -13.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b0149 | mrcB | -3.2 | -20.7 | penicillin-binding protein 1b (NCBI) | compare |
| b2567 | rnc | -2.6 | -1.7 | ribonuclease III (NCBI) | compare |
| b3183 | obgE | -2.5 | -2.5 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4647 | mokA | -1.9 | -1.3 | no description | compare |
| b1105 | ycfM | -1.8 | -5.4 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1861 | ruvA | -1.8 | -2.3 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3390 | aroK | -1.8 | -3.9 | shikimate kinase I (NCBI) | compare |
| b1332 | ynaJ | -1.7 | -1.4 | predicted inner membrane protein (NCBI) | compare |
| b3940 | metL | -1.6 | -9.2 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b3162 | deaD | -1.6 | -6.3 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3636 | rpmG | -1.4 | -3.2 | 50S ribosomal protein L33 (NCBI) | compare |
| b4375 | prfC | -1.4 | -4.5 | peptide chain release factor 3 (NCBI) | compare |
| b3082 | ygjM | -1.4 | -3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2830 | nudH | -1.3 | -2.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3261 | fis | -1.3 | -3.1 | DNA-binding protein Fis (NCBI) | compare |
| b1290 | sapF | -1.3 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4155 | yjeA | -1.2 | -0.8 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b2853 | ygeI | -1.2 | -0.7 | hypothetical protein (NCBI) | compare |
| b1286 | rnb | -1.2 | -3.0 | exoribonuclease II (NCBI) | compare |
| b1850 | eda | -1.2 | -3.4 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2576 | srmB | -1.2 | -3.7 | ATP-dependent RNA helicase (NCBI) | compare |
| b3386 | rpe | -1.1 | -0.8 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b1130 | phoP | -1.1 | -1.8 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b0617 | citD | -1.1 | -1.6 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b4246 | pyrL | -1.1 | -3.8 | pyrBI operon leader peptide (NCBI) | compare |
| b4146 | yjeK | -1.1 | -2.4 | predicted lysine aminomutase (NCBI) | compare |
| b2330 | yfcB | -1.1 | -1.8 | putative adenine-specific methylase (VIMSS) | compare |
| b3341 | rpsG | -1.1 | -1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b3021 | ygiT | -1.1 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0740 | tolB | -1.1 | -5.5 | translocation protein TolB precursor (NCBI) | compare |
| b4414 | tff | -1.1 | -1.8 | unknown RNA (NCBI) | compare |
| b4202 | rpsR | -1.1 | -1.6 | 30S ribosomal protein S18 (NCBI) | compare |
| b0114 | aceE | -1.1 | -1.7 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b2363 | yfdT | -1.1 | -2.8 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0161 | degP | -1.0 | -5.4 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b1281 | pyrF | -1.0 | -4.6 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b1279 | yciS | -1.0 | -1.6 | conserved inner membrane protein (NCBI) | compare |
| b1160 | elbA | -1.0 | -1.1 | hypothetical protein (NCBI) | compare |
| b0739 | tolA | -1.0 | -3.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0920 | ycbC | -1.0 | -4.0 | conserved inner membrane protein (NCBI) | compare |
| b3642 | pyrE | -0.9 | -4.9 | orotate phosphoribosyltransferase (NCBI) | compare |
| b0685 | ybfE | -0.9 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3778 | rep | -0.9 | -6.1 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1291 | sapD | -0.9 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0888 | trxB | -0.9 | -3.0 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2699 | recA | -0.9 | -1.4 | recombinase A (NCBI) | compare |
| b1860 | ruvB | -0.9 | -1.3 | Holliday junction DNA helicase B (NCBI) | compare |
| b4239 | treC | -0.9 | -2.0 | trehalose-6-P hydrolase (NCBI) | compare |
| b3026 | qseC | -0.9 | -4.0 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b3863 | polA | -0.8 | -1.3 | DNA polymerase I (NCBI) | compare |
| b1103 | ycfF | -0.8 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1292 | sapC | -0.8 | -1.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1048 | mdoG | -0.8 | -4.2 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b3811 | xerC | -0.8 | -1.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b4171 | miaA | -0.8 | -2.5 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0200 | gmhB | -0.8 | -1.1 | hypothetical protein (NCBI) | compare |
| b0722 | sdhD | -0.8 | -3.3 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0741 | pal | -0.8 | -2.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4685 | yrbN | -0.8 | -2.0 | expressed protein (RefSeq) | compare |
| b1348 | lar | -0.7 | -2.1 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b3839 | tatC | -0.7 | -4.5 | TatABCE protein translocation system subunit (NCBI) | compare |
| b4215 | ytfI | -0.7 | -1.5 | hypothetical protein (NCBI) | compare |
| b2318 | truA | -0.7 | -2.1 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0858 | ybjO | -0.7 | -1.9 | predicted inner membrane protein (NCBI) | compare |
| b1685 | ydiH | -0.7 | -1.2 | predicted protein (RefSeq) | compare |
| b4234 | yjgA | -0.7 | -3.9 | hypothetical protein (NCBI) | compare |
| b4702 | mgtL | -0.7 | -1.7 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0225 | yafQ | -0.7 | -2.4 | predicted toxin of the YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1658 | purR | -0.7 | -3.0 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1595 | ynfL | -0.6 | -1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1540 | ydfH | -0.6 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0340 | cynS | -0.6 | -2.0 | cyanate hydratase (NCBI) | compare |
| b1865 | nudB | -0.6 | -1.0 | dATP pyrophosphohydrolase (NCBI) | compare |
| b3613 | yibP | -0.6 | -2.6 | putative membrane protein (VIMSS) | compare |
| b1062 | pyrC | -0.6 | -3.8 | dihydroorotase (NCBI) | compare |
| b0945 | pyrD | -0.6 | -4.5 | dihydroorotate dehydrogenase (NCBI) | compare |
| b0183 | rnhB | -0.6 | -2.5 | ribonuclease HII (NCBI) | compare |
| b3935 | priA | -0.6 | -2.3 | primosome assembly protein PriA (NCBI) | compare |
| b0033 | carB | -0.6 | -4.9 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b2937 | speB | -0.6 | -3.4 | agmatinase (NCBI) | compare |
| b1088 | yceD | -0.6 | -2.5 | hypothetical protein (NCBI) | compare |
| b4042 | dgkA | -0.6 | -1.5 | diacylglycerol kinase (NCBI) | compare |
| b2947 | gshB | -0.6 | -2.7 | glutathione synthetase (NCBI) | compare |
| b4313 | fimE | -0.6 | -4.4 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b4179 | vacB | -0.6 | -3.0 | putative enzyme (VIMSS) | compare |
| b1594 | dgsA | -0.6 | -2.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0044 | fixX | -0.6 | -2.3 | predicted 4Fe-4S ferredoxin-type protein (NCBI) | compare |
| b3611 | yibN | -0.6 | -3.2 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b1523 | yneG | -0.6 | -1.5 | hypothetical protein (NCBI) | compare |
| b4163 | glyV | -0.5 | -1.2 | tRNA-Gly (NCBI) | compare |
| b4214 | cysQ | -0.5 | -4.6 | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | compare |
| b4035 | malK | -0.5 | -3.2 | fused maltose transport subunit, ATP-binding component of ABC superfamily/regulatory protein (NCBI) | compare |
| b0032 | carA | -0.5 | -3.6 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b0889 | lrp | -0.5 | -1.5 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b2340 | sixA | -0.5 | -2.5 | phosphohistidine phosphatase (NCBI) | compare |
| b2516 | yfgA | -0.5 | -3.1 | hypothetical protein (NCBI) | compare |
| b1368 | ynaA | -0.5 | -1.6 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b1293 | sapB | -0.5 | -0.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2614 | grpE | -0.5 | -1.0 | heat shock protein (NCBI) | compare |
| b0976 | hyaE | -0.5 | -2.0 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b2912 | ygfA | -0.5 | -2.0 | putative ligase (VIMSS) | compare |
| b2939 | yqgB | -0.5 | -1.0 | predicted protein (RefSeq) | compare |
| b1049 | mdoH | -0.5 | -3.7 | glucosyltransferase MdoH (NCBI) | compare |
| b3405 | ompR | -0.5 | -2.8 | osmolarity response regulator (NCBI) | compare |
| b2393 | nupC | -0.5 | -2.9 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b3816 | corA | -0.5 | -3.7 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b2293 | yfbT | -0.5 | -1.4 | putative phosphatase (VIMSS) | compare |
| b1504 | ydeS | -0.5 | -2.9 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0890 | ftsK | -0.5 | -2.5 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0113 | pdhR | -0.5 | -2.3 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b0247 | ykfG | -0.5 | -1.0 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b0237 | pepD | -0.5 | -3.8 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b4438 | cyaR | -0.5 | -1.3 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b2531 | iscR | -0.5 | -1.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0999 | cbpM | -0.5 | -2.1 | modulator of CbpA co-chaperone (NCBI) | compare |
| b2110 | yehC | -0.5 | -0.6 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b3741 | gidA | -0.5 | -2.6 | glucose-inhibited division protein A (NCBI) | compare |
| b1900 | araG | -0.5 | -2.4 | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1676 | pykF | -0.5 | -2.0 | pyruvate kinase (NCBI) | compare |
| b0678 | nagB | -0.5 | -2.8 | glucosamine-6-phosphate deaminase (NCBI) | compare |
| b0949 | uup | -0.5 | -3.4 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0926 | ycbK | -0.5 | -2.3 | hypothetical protein (NCBI) | compare |
| b1548 | nohA | -0.5 | -1.0 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b0357 | yaiN | -0.5 | -1.6 | putative alpha helix chain (VIMSS) | compare |
| b2258 | b2258 | -0.5 | -0.9 | putative transport/receptor protein (VIMSS) | compare |
| b2659 | b2659 | -0.5 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3442 | yhhZ | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b3728 | pstS | -0.5 | -1.8 | phosphate transporter subunit (NCBI) | compare |
| b0767 | ybhE | -0.5 | -1.9 | 6-phosphogluconolactonase (NCBI) | compare |
| b3649 | rpoZ | -0.5 | -1.6 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3396 | mrcA | -0.5 | -4.3 | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | compare |
| b2650 | ypjC | -0.5 | -0.2 | hypothetical protein (RefSeq) | compare |
| b2750 | cysC | -0.5 | -2.8 | adenylylsulfate kinase (NCBI) | compare |
| b4178 | yjeB | -0.5 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1729 | ydjN | -0.4 | -2.1 | predicted transporter (NCBI) | compare |
| b1644 | b1644 | -0.4 | -1.5 | putative membrane protein (VIMSS) | compare |
| b2281 | nuoI | -0.4 | -1.6 | NADH dehydrogenase subunit I (NCBI) | compare |
| b3781 | trxA | -0.4 | -2.3 | thioredoxin 1 (VIMSS) | compare |
| b3237 | argR | -0.4 | -2.3 | arginine repressor (NCBI) | compare |
| b3259 | prmA | -0.4 | -2.1 | ribosomal protein L11 methyltransferase (NCBI) | compare |
| b0014 | dnaK | -0.4 | -0.9 | molecular chaperone DnaK (NCBI) | compare |
| b1697 | ydiQ | -0.4 | -1.9 | hypothetical protein (NCBI) | compare |
| b3388 | damX | -0.4 | -3.9 | hypothetical protein (NCBI) | compare |
| b1573 | ydfC | -0.4 | -0.9 | Qin prophage; predicted protein (RefSeq) | compare |
| b3204 | ptsN | -0.4 | -2.0 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b4397 | creA | -0.4 | -1.7 | hypothetical protein (NCBI) | compare |
| b3617 | kbl | -0.4 | -2.8 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b4011 | yjaA | -0.4 | -2.0 | hypothetical protein (NCBI) | compare |
| b2426 | ucpA | -0.4 | -1.5 | putative oxidoreductase (VIMSS) | compare |
| b0688 | pgm | -0.4 | -1.3 | phosphoglucomutase (NCBI) | compare |
| b3198 | kdsC | -0.4 | -2.0 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b1686 | ydiI | -0.4 | -1.3 | hypothetical protein (NCBI) | compare |
| b1282 | yciH | -0.4 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b0764 | modB | -0.4 | -2.7 | molybdate ABC transporter permease protein (NCBI) | compare |
| b4201 | priB | -0.4 | -1.5 | primosomal replication protein N (NCBI) | compare |
| b0431 | cyoB | -0.4 | -3.5 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b2569 | lepA | -0.4 | -2.0 | GTP-binding protein LepA (NCBI) | compare |
| b4245 | pyrB | -0.4 | -2.8 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b1643 | ydhI | -0.4 | -2.7 | predicted inner membrane protein (NCBI) | compare |
| b1168 | b1168 | -0.4 | -1.8 | putative proteases (VIMSS) | compare |
| b1751 | ydjY | -0.4 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1989 | asnV | -0.4 | -1.3 | tRNA-Asn (NCBI) | compare |
| b0234 | yafP | -0.4 | -0.7 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0580 | ybdJ | -0.4 | -1.3 | predicted inner membrane protein (NCBI) | compare |
| b3029 | ygiN | -0.4 | -1.8 | quinol monooxygenase (NCBI) | compare |
| b1058 | yceO | -0.4 | -0.2 | hypothetical protein (NCBI) | compare |
| b3871 | bipA | -0.4 | -3.4 | GTP-binding protein (NCBI) | compare |
| b2479 | gcvR | -0.4 | -2.3 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b0713 | ybgL | -0.4 | -2.2 | hypothetical protein (NCBI) | compare |
| b0961 | yccF | -0.4 | -2.2 | conserved inner membrane protein (NCBI) | compare |
| b0738 | tolR | -0.4 | -1.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3027 | ygiZ | -0.4 | -0.2 | conserved inner membrane protein (NCBI) | compare |
| b2498 | upp | -0.4 | -1.5 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b1040 | csgD | -0.4 | -0.7 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b0836 | yliH | -0.4 | -1.8 | hypothetical protein (NCBI) | compare |
| b1273 | yciN | -0.4 | -1.0 | hypothetical protein (NCBI) | compare |
| b2783 | chpR | -0.4 | -1.2 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b0585 | fes | -0.4 | -2.3 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b4699 | fnrS | -0.4 | -0.4 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b2289 | lrhA | -0.4 | -2.6 | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | compare |
| b3387 | dam | -0.4 | -3.3 | DNA adenine methylase (NCBI) | compare |
| b1452 | yncE | -0.4 | -1.9 | hypothetical protein (NCBI) | compare |
| b2966 | yqgA | -0.4 | -2.4 | predicted inner membrane protein (NCBI) | compare |
| b2266 | elaB | -0.4 | -1.7 | hypothetical protein (NCBI) | compare |
| b0385 | yaiC | -0.4 | -2.3 | predicted diguanylate cyclase (NCBI) | compare |
| b0550 | rusA | -0.4 | -1.0 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b0696 | kdpC | -0.4 | -1.5 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b2501 | ppk | -0.4 | -2.8 | polyphosphate kinase (NCBI) | compare |
| b3623 | rfaK | -0.4 | -1.2 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b1263 | trpD | -0.4 | -1.5 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b3292 | zntR | -0.4 | -1.7 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b0658 | ybeX | -0.4 | -0.4 | predicteed ion transport (NCBI) | compare |
| b2024 | hisA | -0.4 | -0.8 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b1613 | manA | -0.4 | -1.1 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b0051 | ksgA | -0.4 | -1.7 | dimethyladenosine transferase (NCBI) | compare |
| b4049 | dusA | -0.4 | -2.7 | tRNA-dihydrouridine synthase A (RefSeq) | compare |
| b2284 | nuoF | -0.4 | -1.7 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b2414 | cysK | -0.4 | -2.6 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | compare |
| b2774 | ygcW | -0.4 | -1.8 | putative oxidoreductase (VIMSS) | compare |