gene name fitness t score description b0683 fur -4.1 -2.3 ferric uptake regulator (NCBI) compare b1192 ldcA -3.8 -7.7 L,D-carboxypeptidase A (NCBI) compare b0740 tolB -3.6 -9.8 translocation protein TolB precursor (NCBI) compare b0149 mrcB -3.5 -19.1 penicillin-binding protein 1b (NCBI) compare b2188 yejM -3.3 -12.3 predicted hydrolase, inner membrane (NCBI) compare b0739 tolA -3.2 -6.1 cell envelope integrity inner membrane protein TolA (NCBI) compare b0907 serC -3.0 -10.5 phosphoserine aminotransferase (NCBI) compare b3052 rfaE -2.6 -7.1 fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) compare b2329 aroC -2.6 -8.3 chorismate synthase (NCBI) compare b3026 qseC -2.5 -7.6 sensory histidine kinase in two-component regulatory system with QseB (NCBI) compare b2913 serA -2.4 -11.3 D-3-phosphoglycerate dehydrogenase (NCBI) compare b0738 tolR -2.4 -5.7 membrane spanning protein in TolA-TolQ-TolR complex (NCBI) compare b3035 tolC -2.4 -10.7 outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) compare b3613 yibP -2.3 -7.5 putative membrane protein (VIMSS) compare b0222 lpcA -2.3 -3.4 phosphoheptose isomerase (NCBI) compare b0741 pal -2.3 -6.6 peptidoglycan-associated outer membrane lipoprotein (NCBI) compare b1105 ycfM -2.2 -7.7 predicted outer membrane lipoprotein (NCBI) compare b0737 tolQ -2.2 -3.5 membrane spanning protein in TolA-TolQ-TolR complex (NCBI) compare b0200 gmhB -2.1 -1.4 hypothetical protein (NCBI) compare b2699 recA -2.1 -1.4 recombinase A (NCBI) compare b0004 thrC -2.1 -8.3 threonine synthase (NCBI) compare b0688 pgm -2.1 -4.7 phosphoglucomutase (NCBI) compare b4418 sraB -2.1 -3.4 unknown RNA (NCBI) compare b1677 lpp -2.0 -2.8 murein lipoprotein (NCBI) compare b1936 intG -2.0 -1.3 predicted defective phage integrase (pseudogene) (RefSeq) compare b2499 purM -2.0 -5.6 phosphoribosylaminoimidazole synthetase (NCBI) compare b1260 trpA -1.9 -3.7 tryptophan synthase subunit alpha (NCBI) compare b1860 ruvB -1.9 -2.1 Holliday junction DNA helicase B (NCBI) compare b1070 flgN -1.9 -1.9 export chaperone for FlgK and FlgL (NCBI) compare b3194 yrbE -1.9 -8.6 predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) compare b3621 rfaC -1.8 -6.3 ADP-heptose:LPS heptosyl transferase I (NCBI) compare b0523 purE -1.8 -4.7 phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) compare b3443 yrhA -1.8 -2.6 orf, hypothetical protein (VIMSS) compare b3191 yrbB -1.8 -8.6 orf, hypothetical protein (VIMSS) compare b2894 xerD -1.8 -1.2 site-specific tyrosine recombinase XerD (NCBI) compare b3405 ompR -1.7 -6.2 osmolarity response regulator (NCBI) compare b3620 rfaF -1.7 -5.4 ADP-heptose:LPS heptosyltransferase II (NCBI) compare b0755 gpmA -1.7 -6.7 phosphoglyceromutase (NCBI) compare b1861 ruvA -1.7 -2.1 Holliday junction DNA helicase motor protein (NCBI) compare b3839 tatC -1.7 -7.4 TatABCE protein translocation system subunit (NCBI) compare b0386 proC -1.7 -6.2 pyrroline-5-carboxylate reductase (NCBI) compare b2346 vacJ -1.6 -9.8 predicted lipoprotein (NCBI) compare b3619 rfaD -1.6 -4.5 ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) compare b1236 galU -1.6 -5.3 glucose-1-phosphate uridylyltransferase (NCBI) compare b3940 metL -1.6 -7.7 bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) compare b0145 dksA -1.5 -3.3 DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) compare b0564 appY -1.5 -0.9 DLP12 prophage; DNA-binding transcriptional activator (NCBI) compare b3842 rfaH -1.5 -5.3 transcriptional activator RfaH (NCBI) compare b3192 yrbC -1.5 -8.9 predicted ABC-type organic solvent transporter (NCBI) compare b4006 purH -1.5 -10.0 bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) compare b3870 glnA -1.5 -4.3 glutamine synthetase (NCBI) compare b1863 ruvC -1.5 -2.5 Holliday junction resolvase (NCBI) compare b2846 yqeH -1.5 -0.8 orf, hypothetical protein (VIMSS) compare b3199 yrbK -1.5 -2.5 hypothetical protein (NCBI) compare b0003 thrB -1.5 -6.8 homoserine kinase (NCBI) compare b2567 rnc -1.4 -1.3 ribonuclease III (NCBI) compare b2814 metZ -1.4 -1.7 tRNA-Met (NCBI) compare b1150 ymfR -1.4 -1.3 e14 prophage; predicted protein (NCBI) compare b4005 purD -1.4 -7.3 phosphoribosylamine--glycine ligase (NCBI) compare b1858 znuC -1.4 -4.0 high-affinity zinc transporter ATPase (NCBI) compare b3493 pitA -1.4 -7.7 phosphate transporter, low-affinity (NCBI) compare b2312 purF -1.4 -5.6 amidophosphoribosyltransferase (NCBI) compare b3838 tatB -1.4 -5.9 sec-independent translocase (NCBI) compare b0014 dnaK -1.4 -1.7 molecular chaperone DnaK (NCBI) compare b3195 yrbF -1.4 -8.7 predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) compare b1984 asnW -1.4 -1.4 tRNA-Asn (NCBI) compare b0053 surA -1.3 -5.9 peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) compare b3387 dam -1.3 -9.7 DNA adenine methylase (NCBI) compare b3193 yrbD -1.3 -7.6 predicted ABC-type organic solvent transporter (NCBI) compare b2557 purL -1.3 -8.1 phosphoribosylformylglycinamidine synthase (NCBI) compare b2476 purC -1.3 -1.9 phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) compare b4701 sokX -1.3 -1.1 sok-related sRNA, function unknown (RefSeq) compare b4388 serB -1.3 -6.1 3-phosphoserine phosphatase (NCBI) compare b3389 aroB -1.3 -8.5 3-dehydroquinate synthase (NCBI) compare b3632 rfaQ -1.3 -10.7 lipopolysaccharide core biosynthesis protein (NCBI) compare b0049 apaH -1.3 -2.8 diadenosinetetraphosphatase (NCBI) compare b1857 yebL -1.2 -4.7 putative adhesin (VIMSS) compare b2182 bcr -1.2 -6.2 bicyclomycin/multidrug efflux system (NCBI) compare b0890 ftsK -1.2 -4.9 DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) compare b3281 aroE -1.2 -8.8 dehydroshikimate reductase, NAD(P)-binding (NCBI) compare b2642 yfjW -1.2 -1.2 CP4-57 prophage; predicted inner membrane protein (NCBI) compare b0908 aroA -1.2 -6.1 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) compare b3631 rfaG -1.2 -9.1 glucosyltransferase I (NCBI) compare b2912 ygfA -1.2 -2.5 putative ligase (VIMSS) compare b2479 gcvR -1.2 -4.2 transcriptional regulation of gcv operon (VIMSS) compare b0161 degP -1.2 -5.9 serine endoprotease (protease Do), membrane-associated (NCBI) compare b0463 acrA -1.2 -6.5 multidrug efflux system (NCBI) compare b1185 dsbB -1.2 -2.3 reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) compare b3404 envZ -1.1 -6.9 osmolarity sensor protein (NCBI) compare b3630 rfaP -1.1 -7.2 kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) compare b1175 minD -1.1 -4.1 membrane ATPase of the MinC-MinD-MinE system (NCBI) compare b0462 acrB -1.1 -8.7 multidrug efflux system protein (NCBI) compare b4509 ylcG -1.1 -3.4 DLP12 prophage; predicted protein (NCBI) compare b3172 argG -1.1 -6.7 argininosuccinate synthase (NCBI) compare b4535 yniD -1.1 -1.4 predicted protein (RefSeq) compare b1103 ycfF -1.1 -1.4 orf, hypothetical protein (VIMSS) compare b2414 cysK -1.0 -6.3 cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) compare b0242 proB -1.0 -5.0 gamma-glutamyl kinase (NCBI) compare b3960 argH -1.0 -6.9 argininosuccinate lyase (NCBI) compare b2494 yfgC -1.0 -5.4 predicted peptidase (NCBI) compare b3811 xerC -1.0 -1.8 site-specific tyrosine recombinase XerC (NCBI) compare b1859 znuB -1.0 -4.6 high-affinity zinc transporter membrane component (NCBI) compare b0522 purK -1.0 -5.3 phosphoribosylaminoimidazole carboxylase (NCBI) compare b2512 yfgL -1.0 -4.0 protein assembly complex, lipoprotein component (NCBI) compare b1252 tonB -1.0 -2.5 membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) compare b3941 metF -1.0 -6.4 5,10-methylenetetrahydrofolate reductase (NCBI) compare b3183 obgE -1.0 -0.9 GTPase involved in cell partioning and DNA repair (NCBI) compare b4520 ymgF -1.0 -2.1 hypothetical protein (NCBI) compare b2934 cmtB -1.0 -0.8 predicted mannitol-specific enzyme IIA component of PTS (NCBI) compare b1604 ydgH -1.0 -3.0 hypothetical protein (NCBI) compare b1261 trpB -1.0 -1.9 tryptophan synthase subunit beta (NCBI) compare b0585 fes -1.0 -4.0 enterobactin/ferric enterobactin esterase (NCBI) compare b3628 rfaB -0.9 -6.2 UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) compare b1368 ynaA -0.9 -2.3 Rac prophage; predicted tail protein (RefSeq) compare b3863 polA -0.9 -1.1 DNA polymerase I (NCBI) compare b0888 trxB -0.9 -3.3 thioredoxin reductase, FAD/NAD(P)-binding (NCBI) compare b4042 dgkA -0.9 -1.9 diacylglycerol kinase (NCBI) compare b2822 recC -0.9 -4.0 exonuclease V (RecBCD complex), gamma chain (NCBI) compare b2838 lysA -0.9 -6.1 diaminopimelate decarboxylase, PLP-binding (NCBI) compare b0849 grxA -0.9 -2.1 glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) (NCBI) compare b4603 rseX -0.9 -0.6 sRNA regulating ompA and ompC translation, with Hfq (RefSeq) compare b0730 mngR -0.9 -1.4 DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) compare b2330 yfcB -0.9 -1.3 putative adenine-specific methylase (VIMSS) compare b3390 aroK -0.9 -1.2 shikimate kinase I (NCBI) compare b1865 nudB -0.9 -1.6 dATP pyrophosphohydrolase (NCBI) compare b1663 mdtK -0.9 -3.4 multidrug efflux protein NorM (NCBI) conserved b3414 gntY -0.9 -4.5 predicted gluconate transport associated protein (NCBI) compare b1765 ydjA -0.9 -0.8 predicted oxidoreductase (NCBI) compare b1977 asnT -0.9 -2.2 tRNA-Asn (NCBI) compare b2280 nuoJ -0.9 -3.5 NADH dehydrogenase subunit J (NCBI) compare b0926 ycbK -0.8 -3.1 hypothetical protein (NCBI) compare b1293 sapB -0.8 -0.9 predicted antimicrobial peptide transporter subunit (NCBI) compare b1730 ydjO -0.8 -0.7 predicted protein (RefSeq) compare b0460 hha -0.8 -2.7 modulator of gene expression, with H-NS (NCBI) compare b0999 cbpM -0.8 -2.8 modulator of CbpA co-chaperone (NCBI) compare b1164 ycgZ -0.8 -1.7 hypothetical protein (NCBI) compare b3829 metE -0.8 -6.7 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (NCBI) compare b0617 citD -0.8 -2.4 citrate lyase, acyl carrier (gamma) subunit (NCBI) compare b3627 rfaI -0.8 -5.2 UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) compare b3860 dsbA -0.8 -4.5 periplasmic protein disulfide isomerase I (NCBI) compare b2174 b2174 -0.8 -4.6 orf, hypothetical protein (VIMSS) compare b1161 ycgX -0.8 -0.7 hypothetical protein (NCBI) compare b2082 ogrK -0.8 -1.0 DNA-binding transcriptional regulator prophage P2 remnant (NCBI) compare b2175 spr -0.8 -2.0 predicted peptidase, outer membrane lipoprotein (NCBI) compare b3774 ilvC -0.8 -5.8 ketol-acid reductoisomerase (NCBI) compare b1724 ydiZ -0.8 -1.7 hypothetical protein (NCBI) compare b1739 osmE -0.8 -1.2 DNA-binding transcriptional activator (NCBI) compare b0589 fepG -0.8 -3.8 iron-enterobactin transporter subunit (NCBI) compare b2025 hisF -0.8 -2.0 imidazole glycerol phosphate synthase subunit HisF (NCBI) compare b0592 fepB -0.8 -4.7 iron-enterobactin transporter subunit (NCBI) compare b0033 carB -0.8 -5.6 carbamoyl-phosphate synthase large subunit (NCBI) compare b3957 argE -0.8 -5.8 acetylornithine deacetylase (NCBI) compare b3006 exbB -0.8 -4.3 membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) compare b2313 cvpA -0.8 -2.5 membrane protein required for colicin V production (NCBI) compare b3609 secB -0.7 -1.7 export protein SecB (NCBI) compare b1258 yciF -0.7 -0.5 hypothetical protein (NCBI) compare b1536 ydeI -0.7 -0.7 hypothetical protein (NCBI) compare b4416 rybA -0.7 -1.0 unknown RNA (NCBI) compare b1693 aroD -0.7 -3.4 3-dehydroquinate dehydratase (NCBI) compare b3600 mtlD -0.7 -4.3 mannitol-1-phosphate 5-dehydrogenase (NCBI) compare b4239 treC -0.7 -1.7 trehalose-6-P hydrolase (NCBI) compare b1883 cheB -0.7 -2.5 chemotaxis-specific methylesterase (NCBI) compare b1853 yebK -0.7 -0.9 predicted DNA-binding transcriptional regulator (NCBI) compare b1680 sufS -0.7 -3.3 selenocysteine lyase (NCBI) compare b1607 ydgC -0.7 -1.1 conserved inner membrane protein associated with alginate biosynthesis (NCBI) compare b1221 narL -0.7 -3.2 DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) (NCBI) compare b2951 yggS -0.7 -2.6 predicted enzyme (NCBI) compare b3366 nirD -0.7 -3.3 nitrite reductase small subunit (NCBI) compare b3828 metR -0.7 -4.2 DNA-binding transcriptional activator, homocysteine-binding (NCBI) compare b0438 clpX -0.7 -3.5 ATP-dependent protease ATP-binding subunit (NCBI) compare b0151 fhuC -0.7 -4.0 iron-hydroxamate transporter subunit (NCBI) conserved b0590 fepD -0.7 -3.4 iron-enterobactin transporter subunit (NCBI) compare b1138 ymfE -0.7 -1.0 e14 prophage; predicted inner membrane protein (NCBI) compare b0243 proA -0.7 -3.9 gamma-glutamyl phosphate reductase (NCBI) compare b0548 ninE -0.7 -1.4 DLP12 prophage; conserved protein (NCBI) compare b1066 rimJ -0.7 -2.9 ribosomal-protein-S5-alanine N-acetyltransferase (NCBI) compare b2424 cysU -0.7 -1.7 sulfate/thiosulfate transporter subunit (NCBI) compare b0032 carA -0.7 -2.8 carbamoyl-phosphate synthase small subunit (NCBI) compare b0632 dacA -0.6 -3.9 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) compare b0814 ompX -0.6 -2.0 outer membrane protein X (NCBI) compare b1874 cutC -0.6 -1.5 copper homeostasis protein (NCBI) compare b2818 argA -0.6 -3.9 N-acetylglutamate synthase (NCBI) compare b3771 ilvD -0.6 -4.6 dihydroxy-acid dehydratase (NCBI) compare b1251 yciI -0.6 -2.3 orf, hypothetical protein (VIMSS) compare b3625 rfaY -0.6 -2.8 lipopolysaccharide core biosynthesis protein (NCBI) compare b3101 yqjF -0.6 -1.4 orf, hypothetical protein (VIMSS) compare b1279 yciS -0.6 -0.8 conserved inner membrane protein (NCBI) compare b1920 fliY -0.6 -1.6 cystine transporter subunit (NCBI) compare b0863 artI -0.6 -3.1 arginine transporter subunit (NCBI) compare b1480 sra -0.6 -0.8 30S ribosomal subunit protein S22 (NCBI) compare b3650 spoT -0.6 -3.1 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) compare b3781 trxA -0.6 -2.2 thioredoxin 1 (VIMSS) compare b0588 fepC -0.6 -2.4 iron-enterobactin transporter subunit (NCBI) compare b1135 ymfC -0.6 -2.2 orf, hypothetical protein (VIMSS) compare b0440 hupB -0.6 -3.2 HU, DNA-binding transcriptional regulator, beta subunit (NCBI) compare b2024 hisA -0.6 -1.3 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) compare b1159 mcrA -0.6 -1.0 e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) compare b2935 tktA -0.6 -1.3 transketolase 1, thiamin-binding (NCBI) compare b3889 yiiE -0.6 -1.5 predicted transcriptional regulator (RefSeq) compare b0843 ybjH -0.6 -2.0 hypothetical protein (NCBI) compare