| | gene | name | fitness | t score | description | |
|---|
| b3961 | oxyR | -5.1 | -14.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0907 | serC | -4.2 | -8.3 | phosphoserine aminotransferase (NCBI) | compare |
| b3035 | tolC | -3.3 | -9.1 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0088 | murD | -3.1 | -2.8 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b0438 | clpX | -3.1 | -5.4 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0437 | clpP | -3.0 | -2.1 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2017 | yefM | -2.8 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1293 | sapB | -2.7 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3868 | glnG | -2.7 | -9.0 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b1192 | ldcA | -2.7 | -1.8 | L,D-carboxypeptidase A (NCBI) | compare |
| b1109 | ndh | -2.6 | -5.1 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b3164 | pnp | -2.5 | -3.8 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1865 | nudB | -2.4 | -1.6 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0605 | ahpC | -2.4 | -5.2 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b3443 | yrhA | -2.4 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1175 | minD | -2.4 | -5.5 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1382 | ynbE | -2.3 | -2.1 | predicted lipoprotein (NCBI) | compare |
| b2912 | ygfA | -2.2 | -1.5 | putative ligase (VIMSS) | compare |
| b1677 | lpp | -2.2 | -2.7 | murein lipoprotein (NCBI) | compare |
| b0683 | fur | -2.1 | -1.4 | ferric uptake regulator (NCBI) | compare |
| b1942 | fliJ | -2.1 | -2.9 | flagellar biosynthesis chaperone (NCBI) | compare |
| b4414 | tff | -2.0 | -4.9 | unknown RNA (NCBI) | compare |
| b3396 | mrcA | -2.0 | -17.0 | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | compare |
| b3405 | ompR | -2.0 | -2.6 | osmolarity response regulator (NCBI) | compare |
| b0386 | proC | -2.0 | -4.1 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0149 | mrcB | -2.0 | -11.4 | penicillin-binding protein 1b (NCBI) | compare |
| b0912 | ihfB | -1.9 | -4.9 | integration host factor subunit beta (NCBI) | compare |
| b0049 | apaH | -1.9 | -2.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b1920 | fliY | -1.8 | -2.7 | cystine transporter subunit (NCBI) | compare |
| b0019 | nhaA | -1.8 | -9.4 | pH-dependent sodium/proton antiporter (NCBI) | compare |
| b3183 | obgE | -1.8 | -1.2 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2518 | ndk | -1.8 | -2.2 | nucleoside diphosphate kinase (NCBI) | compare |
| b3390 | aroK | -1.7 | -2.1 | shikimate kinase I (NCBI) | compare |
| b4592 | yccB | -1.7 | -2.5 | hypothetical protein (RefSeq) | compare |
| b1830 | prc | -1.7 | -1.6 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2498 | upp | -1.7 | -2.5 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b2531 | iscR | -1.7 | -1.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0439 | lon | -1.6 | -3.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0740 | tolB | -1.6 | -1.9 | translocation protein TolB precursor (NCBI) | compare |
| b3790 | rffC | -1.6 | -4.0 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0767 | ybhE | -1.6 | -3.8 | 6-phosphogluconolactonase (NCBI) | compare |
| b1176 | minC | -1.5 | -2.3 | septum formation inhibitor (NCBI) | compare |
| b2910 | zapA | -1.4 | -5.3 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b0015 | dnaJ | -1.4 | -7.8 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b1286 | rnb | -1.4 | -1.8 | exoribonuclease II (NCBI) | compare |
| b1335 | ogt | -1.4 | -3.4 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b3147 | yraM | -1.4 | -9.3 | hypothetical protein (NCBI) | compare |
| b3791 | rffA | -1.4 | -5.0 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2808 | gcvA | -1.4 | -3.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3781 | trxA | -1.4 | -4.1 | thioredoxin 1 (VIMSS) | compare |
| b0222 | lpcA | -1.3 | -2.2 | phosphoheptose isomerase (NCBI) | compare |
| b1185 | dsbB | -1.3 | -3.8 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b2741 | rpoS | -1.3 | -5.4 | RNA polymerase sigma factor (NCBI) | compare |
| b3387 | dam | -1.3 | -8.2 | DNA adenine methylase (NCBI) | compare |
| b1291 | sapD | -1.3 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1148 | ymfM | -1.3 | -3.1 | e14 prophage; predicted protein (NCBI) | compare |
| b2501 | ppk | -1.3 | -5.4 | polyphosphate kinase (NCBI) | compare |
| b1348 | lar | -1.3 | -1.5 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1038 | csgF | -1.3 | -2.2 | predicted transport protein (NCBI) | compare |
| b1070 | flgN | -1.3 | -1.4 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b1556 | b1556 | -1.3 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3163 | nlpI | -1.2 | -3.3 | hypothetical protein (NCBI) | compare |
| b0051 | ksgA | -1.2 | -3.1 | dimethyladenosine transferase (NCBI) | compare |
| b4702 | mgtL | -1.2 | -1.8 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1105 | ycfM | -1.2 | -3.0 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4201 | priB | -1.2 | -1.9 | primosomal replication protein N (NCBI) | compare |
| b3341 | rpsG | -1.2 | -1.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b4545 | ypdJ | -1.2 | -2.1 | no description | compare |
| b2512 | yfgL | -1.2 | -4.2 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3764 | yifE | -1.2 | -4.1 | hypothetical protein (NCBI) | compare |
| b3839 | tatC | -1.2 | -4.8 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0606 | ahpF | -1.2 | -5.1 | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) | compare |
| b1698 | ydiR | -1.2 | -3.7 | predicted electron transfer flavoprotein, FAD-binding (NCBI) | compare |
| b3650 | spoT | -1.1 | -5.6 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b2356 | yfdM | -1.1 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0082 | mraW | -1.1 | -3.0 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2215 | ompC | -1.1 | -5.7 | outer membrane porin protein C (NCBI) | compare |
| b3162 | deaD | -1.1 | -1.7 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b4503 | yafF | -1.1 | -0.9 | no description | compare |
| b4313 | fimE | -1.1 | -6.7 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b1462 | b1462 | -1.1 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0741 | pal | -1.1 | -1.8 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0125 | hpt | -1.1 | -4.1 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b1709 | btuD | -1.1 | -1.4 | vitamin B12-transporter ATPase (NCBI) | compare |
| b0920 | ycbC | -1.1 | -4.1 | conserved inner membrane protein (NCBI) | compare |
| b1600 | mdtJ | -1.0 | -1.2 | multidrug efflux system transporter (NCBI) | compare |
| b4410 | ecnA | -1.0 | -1.4 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b2287 | nuoB | -1.0 | -3.0 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2189 | proL | -1.0 | -1.5 | tRNA-Pro (NCBI) | compare |
| b2947 | gshB | -1.0 | -3.5 | glutathione synthetase (NCBI) | compare |
| b3928 | yiiU | -1.0 | -4.7 | hypothetical protein (NCBI) | compare |
| b1936 | intG | -1.0 | -0.6 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3500 | gor | -1.0 | -1.3 | glutathione reductase (NCBI) | compare |
| b4529 | ydbJ | -1.0 | -0.9 | hypothetical protein (NCBI) | compare |
| b2620 | smpB | -1.0 | -0.6 | SsrA-binding protein (NCBI) | compare |
| b3021 | ygiT | -1.0 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2582 | trxC | -1.0 | -2.1 | thioredoxin 2 (NCBI) | compare |
| b0802 | ybiJ | -1.0 | -1.4 | hypothetical protein (NCBI) | compare |
| b2689 | yqaA | -1.0 | -2.7 | conserved inner membrane protein (NCBI) | compare |
| b0161 | degP | -1.0 | -5.1 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b1438 | ydcQ | -1.0 | -1.9 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3652 | recG | -1.0 | -5.7 | ATP-dependent DNA helicase (NCBI) | compare |
| b1804 | rnd | -0.9 | -2.9 | ribonuclease D (NCBI) | compare |
| b3169 | nusA | -0.9 | -1.5 | transcription elongation factor NusA (NCBI) | compare |
| b4203 | rplI | -0.9 | -3.0 | 50S ribosomal protein L9 (NCBI) | compare |
| b2093 | gatB | -0.9 | -2.7 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b2953 | yggU | -0.9 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3107 | yhaL | -0.9 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4053 | alr | -0.9 | -6.4 | alanine racemase (NCBI) | compare |
| b3778 | rep | -0.9 | -3.8 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3933 | ftsN | -0.9 | -5.3 | essential cell division protein (NCBI) | compare |
| b4480 | hdfR | -0.9 | -4.1 | transcriptional regulator HdfR (NCBI) | compare |
| b2659 | b2659 | -0.9 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3784 | rfe | -0.9 | -5.6 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1103 | ycfF | -0.9 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0888 | trxB | -0.9 | -1.3 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1882 | cheY | -0.9 | -0.4 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b2479 | gcvR | -0.9 | -3.5 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b3787 | rffD | -0.9 | -4.8 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1074 | flgC | -0.8 | -1.1 | flagellar basal-body rod protein C (NCBI) | compare |
| b2906 | visC | -0.8 | -3.9 | hypothetical protein (NCBI) | compare |
| b1147 | ymfL | -0.8 | -1.7 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3414 | gntY | -0.8 | -3.8 | predicted gluconate transport associated protein (NCBI) | compare |
| b4655 | ythA | -0.8 | -1.0 | expressed protein (RefSeq) | compare |
| b2448 | yffQ | -0.8 | -1.9 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b3786 | rffE | -0.8 | -4.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3545 | proK | -0.8 | -1.1 | tRNA-Pro (NCBI) | compare |
| b4533 | ynfO | -0.8 | -1.4 | Qin prophage; predicted protein (NCBI) | compare |
| b0237 | pepD | -0.8 | -4.4 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b4202 | rpsR | -0.8 | -0.5 | 30S ribosomal protein S18 (NCBI) | compare |
| b4413 | sokC | -0.8 | -1.5 | regulatory antisense RNA (NCBI) | compare |
| b4653 | yicT | -0.8 | -1.9 | no description | compare |
| b4234 | yjgA | -0.8 | -2.8 | hypothetical protein (NCBI) | compare |
| b3026 | qseC | -0.8 | -0.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4701 | sokX | -0.8 | -0.7 | sok-related sRNA, function unknown (RefSeq) | compare |
| b3871 | bipA | -0.8 | -5.8 | GTP-binding protein (NCBI) | compare |
| b0435 | bolA | -0.8 | -4.3 | possible regulator of murein genes (VIMSS) | compare |
| b4218 | ytfL | -0.8 | -4.5 | predicted inner membrane protein (NCBI) | compare |
| b0685 | ybfE | -0.8 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3199 | yrbK | -0.8 | -2.3 | hypothetical protein (NCBI) | compare |
| b0406 | tgt | -0.8 | -3.3 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b0999 | cbpM | -0.8 | -2.1 | modulator of CbpA co-chaperone (NCBI) | compare |
| b4647 | mokA | -0.8 | -0.5 | no description | compare |
| b0225 | yafQ | -0.8 | -2.5 | predicted toxin of the YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b3649 | rpoZ | -0.7 | -2.2 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b1542 | ydfI | -0.7 | -2.2 | predicted mannonate dehydrogenase (NCBI) | compare |
| b4698 | mgrR | -0.7 | -1.7 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b4294 | insA-7 | -0.7 | -1.7 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b2330 | yfcB | -0.7 | -0.7 | putative adenine-specific methylase (VIMSS) | compare |
| b2683 | ygaH | -0.7 | -2.0 | predicted inner membrane protein (NCBI) | compare |
| b1828 | b1828 | -0.7 | -3.8 | putative transport protein (VIMSS) | compare |
| b1358 | ydaT | -0.7 | -0.8 | Rac prophage; predicted protein (NCBI) | compare |
| b1362 | rzpR | -0.7 | -1.6 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b4493 | gapC | -0.7 | -1.6 | no description | compare |
| b0001 | thrL | -0.7 | -1.4 | thr operon leader peptide (NCBI) | compare |
| b4180 | rlmB | -0.7 | -3.8 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b2007 | yeeX | -0.7 | -1.4 | conserved protein (RefSeq) | compare |
| b1685 | ydiH | -0.7 | -1.0 | predicted protein (RefSeq) | compare |
| b2915 | yqfE | -0.7 | -1.6 | hypothetical protein (RefSeq) | compare |
| b3617 | kbl | -0.7 | -4.2 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b1583 | ynfB | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b0247 | ykfG | -0.7 | -1.2 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1874 | cutC | -0.7 | -1.3 | copper homeostasis protein (NCBI) | compare |
| b4000 | hupA | -0.7 | -2.9 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3726 | pstA | -0.7 | -2.5 | phosphate transporter subunit (NCBI) | compare |
| b2329 | aroC | -0.7 | -2.6 | chorismate synthase (NCBI) | compare |
| b1693 | aroD | -0.7 | -2.7 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2682 | ygaZ | -0.7 | -2.1 | predicted transporter (NCBI) | compare |
| b3863 | polA | -0.7 | -0.4 | DNA polymerase I (NCBI) | compare |
| b1380 | ldhA | -0.7 | -1.7 | D-lactate dehydrogenase (NCBI) | compare |
| b4393 | trpR | -0.7 | -3.2 | Trp operon repressor (NCBI) | compare |
| b2029 | gnd | -0.7 | -3.6 | 6-phosphogluconate dehydrogenase (NCBI) | compare |
| b2258 | b2258 | -0.7 | -0.8 | putative transport/receptor protein (VIMSS) | compare |
| b3616 | tdh | -0.7 | -3.3 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b4603 | rseX | -0.7 | -0.6 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1658 | purR | -0.7 | -2.4 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b2792 | yqcC | -0.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b4481 | rffT | -0.7 | -2.3 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3131 | agaR | -0.7 | -2.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3858 | yihD | -0.7 | -1.0 | hypothetical protein (NCBI) | compare |
| b3706 | trmE | -0.7 | -1.0 | tRNA modification GTPase (NCBI) | compare |
| b1366 | ydaY | -0.6 | -2.0 | Rac prophage; predicted protein (RefSeq) | compare |
| b3537 | yhjT | -0.6 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0535 | fimZ | -0.6 | -1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3611 | yibN | -0.6 | -2.6 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b4011 | yjaA | -0.6 | -1.8 | hypothetical protein (NCBI) | compare |
| b0339 | cynT | -0.6 | -3.2 | carbonic anhydrase (NCBI) | compare |
| b4245 | pyrB | -0.6 | -3.8 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b1821 | b1821 | -0.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3613 | yibP | -0.6 | -0.8 | putative membrane protein (VIMSS) | compare |
| b0145 | dksA | -0.6 | -1.0 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2284 | nuoF | -0.6 | -2.2 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b4006 | purH | -0.6 | -4.1 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b0430 | cyoC | -0.6 | -2.1 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b3101 | yqjF | -0.6 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3916 | pfkA | -0.6 | -0.6 | 6-phosphofructokinase (NCBI) | compare |
| b1620 | malI | -0.6 | -1.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2071 | yegJ | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b3259 | prmA | -0.6 | -2.3 | ribosomal protein L11 methyltransferase (NCBI) | compare |
| b3785 | wzzE | -0.6 | -4.3 | putative transport protein (VIMSS) | compare |