| | gene | name | fitness | t score | description | |
|---|
| b0088 | murD | -5.3 | -3.6 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b3961 | oxyR | -4.0 | -16.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3169 | nusA | -3.3 | -3.1 | transcription elongation factor NusA (NCBI) | compare |
| b0907 | serC | -3.3 | -8.7 | phosphoserine aminotransferase (NCBI) | compare |
| b0912 | ihfB | -3.2 | -5.7 | integration host factor subunit beta (NCBI) | compare |
| b0438 | clpX | -3.1 | -4.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3035 | tolC | -2.9 | -10.2 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0437 | clpP | -2.9 | -3.4 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1105 | ycfM | -2.5 | -5.3 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1865 | nudB | -2.3 | -1.5 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1192 | ldcA | -2.2 | -2.9 | L,D-carboxypeptidase A (NCBI) | compare |
| b2912 | ygfA | -2.1 | -2.0 | putative ligase (VIMSS) | compare |
| b3868 | glnG | -2.1 | -8.7 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b3405 | ompR | -2.1 | -3.0 | osmolarity response regulator (NCBI) | compare |
| b3396 | mrcA | -2.0 | -17.5 | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | compare |
| b0149 | mrcB | -2.0 | -11.3 | penicillin-binding protein 1b (NCBI) | compare |
| b4414 | tff | -2.0 | -4.4 | unknown RNA (NCBI) | compare |
| b2498 | upp | -1.9 | -2.2 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b2017 | yefM | -1.9 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2518 | ndk | -1.9 | -2.8 | nucleoside diphosphate kinase (NCBI) | compare |
| b3500 | gor | -1.9 | -2.3 | glutathione reductase (NCBI) | compare |
| b3790 | rffC | -1.7 | -4.2 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0049 | apaH | -1.7 | -2.3 | diadenosinetetraphosphatase (NCBI) | compare |
| b4701 | sokX | -1.6 | -1.0 | sok-related sRNA, function unknown (RefSeq) | compare |
| b4503 | yafF | -1.6 | -1.0 | no description | compare |
| b0386 | proC | -1.6 | -4.1 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0990 | cspG | -1.6 | -1.0 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3164 | pnp | -1.6 | -3.5 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3390 | aroK | -1.5 | -1.8 | shikimate kinase I (NCBI) | compare |
| b0741 | pal | -1.5 | -2.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2330 | yfcB | -1.5 | -1.3 | putative adenine-specific methylase (VIMSS) | compare |
| b0740 | tolB | -1.5 | -2.3 | translocation protein TolB precursor (NCBI) | compare |
| b3443 | yrhA | -1.5 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b0439 | lon | -1.5 | -3.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1175 | minD | -1.4 | -4.2 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0683 | fur | -1.4 | -1.4 | ferric uptake regulator (NCBI) | compare |
| b3147 | yraM | -1.4 | -11.0 | hypothetical protein (NCBI) | compare |
| b1830 | prc | -1.4 | -2.2 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0015 | dnaJ | -1.4 | -7.5 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b1863 | ruvC | -1.4 | -0.9 | Holliday junction resolvase (NCBI) | compare |
| b1085 | b1085 | -1.3 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b2215 | ompC | -1.3 | -6.4 | outer membrane porin protein C (NCBI) | compare |
| b1088 | yceD | -1.3 | -4.3 | hypothetical protein (NCBI) | compare |
| b3839 | tatC | -1.3 | -5.5 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3781 | trxA | -1.3 | -4.5 | thioredoxin 1 (VIMSS) | compare |
| b3636 | rpmG | -1.2 | -2.3 | 50S ribosomal protein L33 (NCBI) | compare |
| b0767 | ybhE | -1.2 | -3.4 | 6-phosphogluconolactonase (NCBI) | compare |
| b2528 | iscA | -1.2 | -2.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1291 | sapD | -1.2 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3652 | recG | -1.2 | -7.2 | ATP-dependent DNA helicase (NCBI) | compare |
| b3764 | yifE | -1.2 | -4.6 | hypothetical protein (NCBI) | compare |
| b3791 | rffA | -1.2 | -4.5 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1109 | ndh | -1.2 | -3.2 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b2259 | pmrD | -1.2 | -1.4 | polymyxin resistance protein B (VIMSS) | compare |
| b1607 | ydgC | -1.1 | -1.9 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b0730 | mngR | -1.1 | -1.3 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1613 | manA | -1.1 | -1.5 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b1286 | rnb | -1.1 | -1.6 | exoribonuclease II (NCBI) | compare |
| b3387 | dam | -1.0 | -6.9 | DNA adenine methylase (NCBI) | compare |
| b1176 | minC | -1.0 | -1.9 | septum formation inhibitor (NCBI) | compare |
| b4480 | hdfR | -1.0 | -4.7 | transcriptional regulator HdfR (NCBI) | compare |
| b0862 | artQ | -1.0 | -2.7 | arginine transporter subunit (NCBI) | compare |
| b3341 | rpsG | -1.0 | -1.3 | 30S ribosomal protein S7 (NCBI) | compare |
| b1600 | mdtJ | -1.0 | -1.0 | multidrug efflux system transporter (NCBI) | compare |
| b2808 | gcvA | -1.0 | -2.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4203 | rplI | -1.0 | -3.8 | 50S ribosomal protein L9 (NCBI) | compare |
| b1804 | rnd | -1.0 | -3.3 | ribonuclease D (NCBI) | compare |
| b3649 | rpoZ | -1.0 | -2.9 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b0014 | dnaK | -1.0 | -1.4 | molecular chaperone DnaK (NCBI) | compare |
| b3650 | spoT | -1.0 | -5.6 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b2947 | gshB | -1.0 | -3.4 | glutathione synthetase (NCBI) | compare |
| b4163 | glyV | -1.0 | -1.6 | tRNA-Gly (NCBI) | compare |
| b1138 | ymfE | -0.9 | -1.3 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b0051 | ksgA | -0.9 | -2.6 | dimethyladenosine transferase (NCBI) | compare |
| b0222 | lpcA | -0.9 | -1.8 | phosphoheptose isomerase (NCBI) | compare |
| b3163 | nlpI | -0.9 | -2.6 | hypothetical protein (NCBI) | compare |
| b1566 | flxA | -0.9 | -2.2 | Qin prophage; predicted protein (NCBI) | compare |
| b2951 | yggS | -0.9 | -3.8 | predicted enzyme (NCBI) | compare |
| b0161 | degP | -0.9 | -4.8 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b1103 | ycfF | -0.9 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3616 | tdh | -0.9 | -4.3 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b1281 | pyrF | -0.9 | -2.0 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b3162 | deaD | -0.9 | -1.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b2910 | zapA | -0.9 | -4.1 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b3794 | rffM | -0.8 | -3.6 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b0605 | ahpC | -0.8 | -2.1 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1850 | eda | -0.8 | -1.2 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2183 | rsuA | -0.8 | -2.7 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b2318 | truA | -0.8 | -1.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1984 | asnW | -0.8 | -1.0 | tRNA-Asn (NCBI) | compare |
| b4481 | rffT | -0.8 | -2.6 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3871 | bipA | -0.8 | -6.0 | GTP-binding protein (NCBI) | compare |
| b3933 | ftsN | -0.8 | -4.6 | essential cell division protein (NCBI) | compare |
| b2683 | ygaH | -0.8 | -2.4 | predicted inner membrane protein (NCBI) | compare |
| b3183 | obgE | -0.8 | -0.9 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0627 | tatE | -0.8 | -1.8 | twin arginine translocase protein E (NCBI) | compare |
| b1084 | rne | -0.8 | -2.6 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2181 | yejG | -0.8 | -2.0 | hypothetical protein (NCBI) | compare |
| b2093 | gatB | -0.8 | -2.1 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b2189 | proL | -0.8 | -1.3 | tRNA-Pro (NCBI) | compare |
| b4000 | hupA | -0.8 | -3.1 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3778 | rep | -0.8 | -3.4 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1362 | rzpR | -0.8 | -1.7 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b1709 | btuD | -0.8 | -1.0 | vitamin B12-transporter ATPase (NCBI) | compare |
| b0828 | iaaA | -0.8 | -3.7 | L-asparaginase (NCBI) | compare |
| b4552 | yrhC | -0.8 | -0.7 | no description | compare |
| b2356 | yfdM | -0.8 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3786 | rffE | -0.8 | -4.8 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b2281 | nuoI | -0.7 | -2.0 | NADH dehydrogenase subunit I (NCBI) | compare |
| b3199 | yrbK | -0.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b3784 | rfe | -0.7 | -4.8 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b4006 | purH | -0.7 | -5.2 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b0920 | ycbC | -0.7 | -2.7 | conserved inner membrane protein (NCBI) | compare |
| b3026 | qseC | -0.7 | -1.0 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2479 | gcvR | -0.7 | -3.0 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b3613 | yibP | -0.7 | -0.7 | putative membrane protein (VIMSS) | compare |
| b2895 | fldB | -0.7 | -1.8 | flavodoxin 2 (NCBI) | compare |
| b1907 | tyrP | -0.7 | -2.7 | tyrosine transporter (NCBI) | compare |
| b2444 | yffM | -0.7 | -1.3 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b2744 | surE | -0.7 | -3.7 | acid phosphatase (NCBI) | compare |
| b1524 | yneH | -0.7 | -0.7 | predicted glutaminase (NCBI) | compare |
| b1727 | yniC | -0.7 | -1.5 | predicted hydrolase (NCBI) | compare |
| b1882 | cheY | -0.7 | -0.3 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1971 | yedY | -0.7 | -2.7 | hypothetical protein (NCBI) | compare |
| b1418 | cybB | -0.7 | -2.0 | cytochrome b(561) (VIMSS) | compare |
| b3863 | polA | -0.7 | -0.4 | DNA polymerase I (NCBI) | compare |
| b4633 | xisD | -0.7 | -2.8 | no description | compare |
| b0059 | hepA | -0.7 | -5.9 | ATP-dependent helicase HepA (NCBI) | compare |
| b4218 | ytfL | -0.7 | -4.5 | predicted inner membrane protein (NCBI) | compare |
| b2829 | ptsP | -0.7 | -5.1 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b2024 | hisA | -0.7 | -1.5 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b3870 | glnA | -0.7 | -1.8 | glutamine synthetase (NCBI) | compare |
| b3149 | yraO | -0.7 | -3.0 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b0339 | cynT | -0.7 | -2.7 | carbonic anhydrase (NCBI) | compare |
| b0888 | trxB | -0.7 | -1.2 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1742 | b1742 | -0.7 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3260 | dusB | -0.7 | -3.5 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b4529 | ydbJ | -0.7 | -0.7 | hypothetical protein (NCBI) | compare |
| b2083 | yegZ | -0.7 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b4201 | priB | -0.7 | -1.4 | primosomal replication protein N (NCBI) | compare |
| b0019 | nhaA | -0.7 | -4.3 | pH-dependent sodium/proton antiporter (NCBI) | compare |
| b3157 | yhbT | -0.7 | -2.9 | predicted lipid carrier protein (NCBI) | compare |
| b3816 | corA | -0.7 | -4.4 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b4178 | yjeB | -0.7 | -2.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3787 | rffD | -0.7 | -3.9 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1693 | aroD | -0.7 | -2.6 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2501 | ppk | -0.7 | -3.1 | polyphosphate kinase (NCBI) | compare |
| b3916 | pfkA | -0.6 | -0.8 | 6-phosphofructokinase (NCBI) | compare |
| b2689 | yqaA | -0.6 | -1.9 | conserved inner membrane protein (NCBI) | compare |
| b4457 | csrC | -0.6 | -2.5 | regulatory RNA (NCBI) | compare |
| b2784 | relA | -0.6 | -4.2 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b2915 | yqfE | -0.6 | -1.9 | hypothetical protein (RefSeq) | compare |
| b1686 | ydiI | -0.6 | -1.3 | hypothetical protein (NCBI) | compare |
| b1504 | ydeS | -0.6 | -2.3 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1480 | sra | -0.6 | -0.8 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b3545 | proK | -0.6 | -1.0 | tRNA-Pro (NCBI) | compare |
| b0405 | queA | -0.6 | -3.4 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI) | compare |
| b3438 | gntR | -0.6 | -3.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0881 | clpS | -0.6 | -1.0 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b1095 | fabF | -0.6 | -3.7 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1522 | yneF | -0.6 | -2.8 | predicted diguanylate cyclase (NCBI) | compare |
| b4369 | leuP | -0.6 | -2.0 | tRNA-Leu (NCBI) | compare |
| b2435 | amiA | -0.6 | -2.9 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b2512 | yfgL | -0.6 | -2.5 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3617 | kbl | -0.6 | -3.8 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b1942 | fliJ | -0.6 | -1.0 | flagellar biosynthesis chaperone (NCBI) | compare |
| b2576 | srmB | -0.6 | -1.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b4406 | yaeP | -0.6 | -1.1 | hypothetical protein (NCBI) | compare |
| b0710 | ybgI | -0.6 | -2.4 | conserved metal-binding protein (NCBI) | compare |
| b0606 | ahpF | -0.6 | -2.9 | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) | compare |
| b3806 | cyaA | -0.6 | -2.7 | adenylate cyclase (NCBI) | compare |
| b1819 | manZ | -0.6 | -2.4 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b3726 | pstA | -0.6 | -2.4 | phosphate transporter subunit (NCBI) | compare |
| b0082 | mraW | -0.6 | -1.9 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0895 | dmsB | -0.6 | -2.6 | dimethyl sulfoxide reductase, anaerobic, subunit B (NCBI) | compare |
| b0942 | ycbU | -0.6 | -2.1 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1335 | ogt | -0.6 | -1.7 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b1104 | ycfL | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b4450 | arcZ | -0.6 | -2.1 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b3100 | yqjK | -0.6 | -2.2 | hypothetical protein (NCBI) | compare |
| b1332 | ynaJ | -0.6 | -0.3 | predicted inner membrane protein (NCBI) | compare |
| b0407 | yajC | -0.6 | -1.3 | preprotein translocase subunit YajC (NCBI) | compare |
| b1827 | kdgR | -0.6 | -1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0219 | yafV | -0.6 | -2.4 | predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) | compare |
| b2209 | eco | -0.6 | -1.0 | ecotin precursor (NCBI) | compare |
| b1874 | cutC | -0.6 | -1.1 | copper homeostasis protein (NCBI) | compare |
| b1171 | b1171 | -0.6 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0435 | bolA | -0.6 | -2.9 | possible regulator of murein genes (VIMSS) | compare |
| b4202 | rpsR | -0.6 | -0.6 | 30S ribosomal protein S18 (NCBI) | compare |
| b3860 | dsbA | -0.6 | -4.3 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b2236 | yfaE | -0.6 | -1.7 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b4053 | alr | -0.6 | -4.0 | alanine racemase (NCBI) | compare |
| b3414 | gntY | -0.6 | -2.7 | predicted gluconate transport associated protein (NCBI) | compare |
| b1324 | tpx | -0.6 | -2.0 | thiol peroxidase (NCBI) | compare |
| b2906 | visC | -0.6 | -2.9 | hypothetical protein (NCBI) | compare |
| b1676 | pykF | -0.6 | -1.6 | pyruvate kinase (NCBI) | compare |
| b4653 | yicT | -0.6 | -1.4 | no description | compare |
| b3446 | yrhB | -0.6 | -2.4 | hypothetical protein (NCBI) | compare |
| b3706 | trmE | -0.6 | -1.2 | tRNA modification GTPase (NCBI) | compare |
| b3611 | yibN | -0.5 | -2.4 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |