Experiment set25IT061 for Pseudomonas simiae WCS417

200 most important genes:

gene	name	fitness	t score	description
PS417_19630		-4.5	-2.5	LuxR family transcriptional regulator
PS417_03930		-4.1	-7.5	thymidine phosphorylase
PS417_21625		-4.1	-1.0	DNA-binding protein
PS417_08410		-3.8	-2.0	hypothetical protein
PS417_24705		-3.7	-2.5	D-alanyl-D-alanine carboxypeptidase
PS417_00755		-3.6	-0.9	biofilm PGA synthesis protein PgaD
PS417_00550		-3.4	-1.2	hypothetical protein
PS417_16555		-3.3	-1.6	cupin
PS417_02210		-3.2	-5.9	diguanylate cyclase
PS417_06540		-2.9	-1.8	membrane protein
PS417_18310		-2.9	-1.2	hypothetical protein
PS417_23580		-2.8	-0.9	peptidylprolyl isomerase
PS417_05985		-2.6	-2.5	chemotaxis protein CheY
PS417_08620		-2.6	-1.1	hypothetical protein
PS417_01920		-2.5	-0.9	ATP-dependent protease subunit HslV
PS417_02555		-2.5	-14.1	exoribonuclease R
PS417_20610		-2.5	-1.5	hypothetical protein
PS417_20025		-2.4	-1.4	alpha-ribazole phosphatase
PS417_23575		-2.3	-3.3	hypothetical protein
PS417_19635		-2.2	-5.6	lipid kinase
PS417_16490		-2.2	-1.1	cell division protein FtsK
PS417_17645		-2.2	-2.0	RND transporter
PS417_02225		-2.2	-1.5	bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
PS417_27870		-2.1	-2.5	ATP-dependent DNA helicase RecG
PS417_02385		-2.1	-1.4	esterase
PS417_19095		-2.1	-1.3	hypothetical protein
PS417_27795		-2.0	-0.5	orotate phosphoribosyltransferase
PS417_19190		-2.0	-2.8	BolA family transcriptional regulator
PS417_20585		-2.0	-2.8	chemotaxis protein
PS417_19800		-1.9	-1.7	flagellar motor switch protein FliG
PS417_07120		-1.9	-4.2	RNA polymerase sigma-H factor
PS417_05905		-1.9	-1.5	hypothetical protein
PS417_24275		-1.8	-12.6	diguanylate phosphodiesterase
PS417_27155		-1.8	-1.4	aliphatic sulfonates transport ATP-binding subunit
PS417_17675		-1.8	-1.4	ABC transporter
PS417_17000		-1.8	-2.6	MerR family transcriptional regulator
PS417_09470		-1.7	-0.8	hypothetical protein
PS417_12595		-1.7	-1.1	transcriptional regulator
PS417_16825		-1.7	-3.0	membrane protein
PS417_04380		-1.7	-0.7	ABC transporter permease
PS417_06245		-1.7	-1.1	zinc metallopeptidase RseP
PS417_02255		-1.7	-1.9	lipopolysaccharide kinase
PS417_23950		-1.7	-0.9	polynucleotide phosphorylase/polyadenylase
PS417_06095		-1.6	-1.6	energy transducer TonB
PS417_04500		-1.6	-1.2	hypothetical protein
PS417_23545		-1.6	-1.1	gamma-glutamyl kinase
PS417_19610		-1.6	-1.7	molybdenum cofactor sulfurase
PS417_08025		-1.6	-1.1	acetylornithine aminotransferase
PS417_16855		-1.6	-1.4	cation:proton antiporter
PS417_19625		-1.6	-1.5	histidine kinase
PS417_14980		-1.6	-0.8	universal stress protein UspA
PS417_14835		-1.6	-2.7	amidase
PS417_09335		-1.6	-1.4	HAD family hydrolase
PS417_08545		-1.6	-1.4	aromatic ring-opening dioxygenase LigB
PS417_00625		-1.5	-5.0	taurine dioxygenase
PS417_00630		-1.5	-2.9	nitrate ABC transporter substrate-binding protein
PS417_22450		-1.5	-0.6	ATP-dependent DNA helicase RuvA
PS417_10920		-1.5	-2.7	LysR family transcriptional regulator
PS417_16885		-1.5	-2.1	hypothetical protein
PS417_04515		-1.5	-4.8	peptidase M48
PS417_10010		-1.5	-2.1	Replication protein P
PS417_13075		-1.4	-1.2	hypothetical protein
PS417_16000		-1.4	-1.6	chemotaxis protein CheY
PS417_00045		-1.3	-1.5	glycerol acyltransferase
PS417_12280		-1.3	-1.4	MerR family transcriptional regulator
PS417_09420		-1.3	-1.5	LysR family transcriptional regulator
PS417_10575		-1.3	-2.2	DNA alkylation repair protein
PS417_07615		-1.3	-3.8	TetR family transcriptional regulator
PS417_13790		-1.3	-2.6	UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase
PS417_24745		-1.3	-1.5	gamma-glutamyl phosphate reductase
PS417_08090		-1.3	-0.7	3-oxoacyl-ACP reductase
PS417_11475		-1.3	-2.0	membrane protein
PS417_05820		-1.3	-1.3	recombinase RecX
PS417_23900		-1.3	-4.5	poly(A) polymerase
PS417_13140		-1.3	-1.4	oxidoreductase
PS417_26695		-1.2	-1.1	uracil phosphoribosyltransferase
PS417_28220		-1.2	-1.4	LysR family transcriptional regulator
PS417_04650		-1.2	-0.4	D-alanine--D-alanine ligase
PS417_12375		-1.2	-1.6	serine/threonine protein phosphatase
PS417_19600		-1.2	-0.7	exonuclease
PS417_07095		-1.2	-4.3	histidine kinase
PS417_08730		-1.2	-1.2	cytochrome C
PS417_17930		-1.2	-1.6	aldehyde dehydrogenase
PS417_01915		-1.2	-0.3	ATP-dependent protease ATP-binding subunit HslU
PS417_25915		-1.1	-2.1	carbon-nitrogen hydrolase
PS417_18705		-1.1	-2.7	succinate dehydrogenase
PS417_23855		-1.1	-1.3	ABC transporter substrate-binding protein
PS417_09440		-1.1	-1.4	MerR family transcriptional regulator
PS417_18455		-1.1	-1.7	hypothetical protein
PS417_28140		-1.1	-1.5	asparaginase
PS417_23360		-1.1	-0.8	hypothetical protein
PS417_05500		-1.1	-1.4	2,3-diketo-5-methylthio-1-phosphopentane phosphatase
PS417_02630		-1.1	-1.7	NAD synthetase
PS417_06825		-1.1	-2.0	hypothetical protein
PS417_26345		-1.1	-2.4	choline dehydrogenase
PS417_00995		-1.1	-1.4	alpha/beta hydrolase
PS417_09035		-1.1	-2.3	hypothetical protein
PS417_05960		-1.1	-2.2	chemotaxis protein
PS417_21690		-1.1	-3.3	N-succinylarginine dihydrolase
PS417_08135		-1.1	-2.3	3-phosphoshikimate 1-carboxyvinyltransferase
PS417_02805		-1.1	-0.9	urease subunit gamma
PS417_28510		-1.0	-3.3	chromosome partitioning protein
PS417_11950		-1.0	-1.0	hypothetical protein
PS417_19505		-1.0	-1.4	2,4-diaminobutyrate 4-aminotransferase
PS417_25380		-1.0	-1.9	hypothetical protein
PS417_13735		-1.0	-1.1	hypothetical protein
PS417_14825		-1.0	-1.8	hypothetical protein
PS417_16810		-1.0	-1.3	acyl-CoA dehydrogenase
PS417_16680		-1.0	-1.3	MFS transporter
PS417_26535		-1.0	-2.2	cytochrome B561
PS417_19520		-1.0	-1.2	transcriptional regulator
PS417_19065		-1.0	-0.7	monooxygenase
PS417_26800		-1.0	-3.7	cell division protein FtsX
PS417_27865		-1.0	-1.1	LysR family transcriptional regulator
PS417_00375		-1.0	-1.6	membrane protein
PS417_12870		-1.0	-1.0	enoyl-CoA hydratase
PS417_11810		-1.0	-1.4	oxidoreductase
PS417_00175		-1.0	-0.6	CigR
PS417_14710		-1.0	-0.9	isochorismatase
PS417_06145		-1.0	-0.6	hypothetical protein
PS417_22250		-1.0	-2.7	pseudouridine synthase
PS417_11400		-1.0	-1.0	phosphoglycerate mutase
PS417_14590		-1.0	-1.0	LysR family transcriptional regulator
PS417_16535		-0.9	-1.6	NUDIX hydrolase
PS417_24650		-0.9	-0.9	membrane protein
PS417_06445		-0.9	-1.3	iron-siderophore ABC transporter permease
PS417_25275		-0.9	-1.4	hypothetical protein
PS417_17805		-0.9	-1.6	microcin B17 processing protein McbC
PS417_17705		-0.9	-1.7	LacI family transcriptional regulator
PS417_02405		-0.9	-3.0	hypothetical protein
PS417_05140		-0.9	-1.4	dipicolinate synthase
PS417_00030		-0.9	-2.6	hypothetical protein
PS417_13065		-0.9	-1.8	UDP pyrophosphate phosphatase
PS417_19590		-0.9	-1.9	enoyl-CoA hydratase
PS417_27115		-0.9	-4.2	putrescine ABC transporter, ATPase component (from data)
PS417_23450		-0.9	-2.3	membrane protein
PS417_00900		-0.9	-1.5	4-aminobutyrate aminotransferase
PS417_20825		-0.9	-1.7	drug:proton antiporter
PS417_27705		-0.9	-1.1	amino acid dehydrogenase
PS417_15105		-0.9	-2.9	membrane protein
PS417_27110		-0.9	-2.0	spermidine/putrescine ABC transporter permease
PS417_04220		-0.9	-0.7	4-carboxymuconolactone decarboxylase
PS417_19805		-0.9	-2.0	flagellar M-ring protein FliF
PS417_26990		-0.9	-0.3	RNA pyrophosphohydrolase
PS417_04415		-0.9	-4.4	ATP phosphoribosyltransferase (EC 2.4.2.17) (from data)
PS417_07840		-0.9	-1.5	hypothetical protein
PS417_00370		-0.9	-0.5	hypothetical protein
PS417_13620		-0.9	-0.9	thermostable hemolysin
PS417_26390		-0.9	-1.1	acyltransferase
PS417_22205		-0.9	-2.7	potassium transporter TrkH
PS417_27815		-0.9	-0.9	hypothetical protein
PS417_21710		-0.9	-2.3	Succinylornithine transaminase (EC 2.6.1.81) (from data)
PS417_21125		-0.9	-3.0	phosphoadenosine phosphosulfate reductase
PS417_09140		-0.8	-1.6	biopolymer transporter ExbB
PS417_07160		-0.8	-3.0	glycine cleavage system protein R
PS417_00570		-0.8	-2.6	NADP transhydrogenase subunit alpha
PS417_10810		-0.8	-1.2	hypothetical protein
PS417_07765		-0.8	-2.4	hypothetical protein
PS417_00295		-0.8	-2.8	hypothetical protein
PS417_25905		-0.8	-1.4	AsnC family transcriptional regulator
PS417_17480		-0.8	-3.3	branched-chain amino acid ABC transporter substrate-binding protein
PS417_23590		-0.8	-1.8	bleomycin resistance protein
PS417_20660		-0.8	-3.1	hypothetical protein
PS417_12155		-0.8	-2.5	transporter
PS417_27910		-0.8	-1.5	PppA
PS417_22000		-0.8	-1.9	glutathione S-transferase
PS417_16320		-0.8	-1.5	protein tyrosine phosphatase
PS417_27300		-0.8	-0.4	cell division protein ZapA
PS417_09150		-0.8	-1.1	energy transducer TonB
PS417_16275		-0.8	-1.3	hypothetical protein
PS417_19615		-0.8	-1.9	chemotaxis protein CheW
PS417_13005		-0.8	-2.8	Asp/Glu racemase
PS417_12785		-0.8	-2.1	hypothetical protein
PS417_05445		-0.8	-0.7	DNA mismatch repair protein MutT
PS417_24125		-0.8	-2.1	hypothetical protein
PS417_27380		-0.8	-1.5	GntR family transcriptional regulator
PS417_03045		-0.8	-0.5	hypothetical protein
PS417_00925		-0.8	-1.1	hypothetical protein
PS417_16775		-0.8	-1.7	branched-chain amino acid ABC transporter ATP-binding protein
PS417_02950		-0.8	-1.2	tRNA-dihydrouridine synthase B
PS417_24895		-0.8	-0.9	hypothetical protein
PS417_15585		-0.8	-1.9	DNA repair nucleotidyltransferase
PS417_00725		-0.8	-2.3	RND transporter
PS417_27290		-0.8	-0.7	hypothetical protein
PS417_05840		-0.8	-1.3	LuxR family transcriptional regulator
PS417_14810		-0.8	-1.4	Fosmidomycin resistance protein
PS417_09300		-0.8	-1.7	peptidylprolyl isomerase
PS417_10045		-0.8	-1.8	hypothetical protein
PS417_07085		-0.8	-2.0	transcriptional regulator
PS417_05135		-0.8	-3.3	nucleoid-associated protein
PS417_20115		-0.8	-1.0	hypothetical protein
PS417_11140		-0.8	-1.5	peptide ABC transporter permease
PS417_06100		-0.8	-0.8	SAM-dependent methyltransferase
PS417_22950		-0.8	-1.9	preQ0 transporter
PS417_11025		-0.8	-2.5	sugar ABC transporter substrate-binding protein
PS417_20340		-0.8	-0.8	hypothetical protein
PS417_14030		-0.8	-2.4	hypothetical protein
PS417_13855		-0.8	-0.7	acetyl-CoA acetyltransferase
PS417_11300		-0.7	-2.3	general secretion pathway protein GspE
PS417_03230		-0.7	-2.7	TetR family transcriptional regulator

Specific Phenotypes

None in this experiment

For Pseudomonas simiae WCS417 in phage experiments