Experiment set25IT060 for Pseudomonas simiae WCS417

200 most important genes:

gene	name	fitness	t score	description
PS417_24705		-4.9	-2.4	D-alanyl-D-alanine carboxypeptidase
PS417_03930		-4.5	-7.6	thymidine phosphorylase
PS417_19630		-4.5	-2.5	LuxR family transcriptional regulator
PS417_19625		-4.2	-2.6	histidine kinase
PS417_20585		-3.9	-7.9	chemotaxis protein
PS417_02210		-3.6	-4.7	diguanylate cyclase
PS417_05985		-3.6	-2.4	chemotaxis protein CheY
PS417_27870		-3.1	-2.0	ATP-dependent DNA helicase RecG
PS417_18310		-2.9	-1.2	hypothetical protein
PS417_23580		-2.8	-1.0	peptidylprolyl isomerase
PS417_01290		-2.7	-2.1	ADP-ribose diphosphatase
PS417_23950		-2.6	-1.1	polynucleotide phosphorylase/polyadenylase
PS417_02555		-2.6	-13.8	exoribonuclease R
PS417_24275		-2.3	-15.1	diguanylate phosphodiesterase
PS417_00650		-2.3	-1.0	LysR family transcriptional regulator
PS417_24500		-2.3	-2.4	DEAD/DEAH box helicase
PS417_19800		-2.3	-2.0	flagellar motor switch protein FliG
PS417_17780		-2.2	-1.3	Ais protein
PS417_01145		-2.2	-1.1	taurine transporter ATP-binding subunit
PS417_21480		-2.2	-0.9	23S rRNA pseudouridylate synthase
PS417_15090		-2.1	-1.6	hypothetical protein
PS417_06075		-2.1	-1.6	hypothetical protein
PS417_27795		-2.1	-0.5	orotate phosphoribosyltransferase
PS417_06095		-2.0	-1.8	energy transducer TonB
PS417_20610		-2.0	-1.3	hypothetical protein
PS417_13140		-2.0	-1.8	oxidoreductase
PS417_07560		-2.0	-1.4	universal stress protein UspA
PS417_17000		-2.0	-2.6	MerR family transcriptional regulator
PS417_01920		-2.0	-0.9	ATP-dependent protease subunit HslV
PS417_21625		-2.0	-0.8	DNA-binding protein
PS417_13735		-1.9	-1.6	hypothetical protein
PS417_19635		-1.9	-6.2	lipid kinase
PS417_00960		-1.9	-2.3	transcriptional regulator
PS417_22060		-1.9	-1.3	hypothetical protein
PS417_19720		-1.8	-1.3	DNA-binding protein
PS417_22445		-1.8	-1.8	ATP-dependent DNA helicase RuvB
PS417_19425		-1.8	-0.8	allantoicase
PS417_02225		-1.7	-1.9	bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
PS417_08230		-1.7	-1.4	lipopolysaccharide biosynthesis protein RfbH
PS417_09655		-1.7	-2.4	RNA polymerase sigma factor
PS417_00045		-1.6	-1.7	glycerol acyltransferase
PS417_08135		-1.6	-2.8	3-phosphoshikimate 1-carboxyvinyltransferase
PS417_13445		-1.6	-1.2	D-aminopeptidase
PS417_23900		-1.6	-6.3	poly(A) polymerase
PS417_20715		-1.6	-2.0	cytochrome Cbb3
PS417_28140		-1.6	-3.4	asparaginase
PS417_11585		-1.6	-2.6	LuxR family transcriptional regulator
PS417_00630		-1.6	-3.1	nitrate ABC transporter substrate-binding protein
PS417_15135		-1.6	-0.9	hypothetical protein
PS417_03380		-1.6	-0.9	hypothetical protein
PS417_22840		-1.6	-1.0	tRNA-Met
PS417_04800		-1.6	-2.0	alginate O-acetyltransferase
PS417_02845		-1.6	-2.5	ABC transporter permease
PS417_22565		-1.5	-0.4	formyltetrahydrofolate deformylase
PS417_05535		-1.5	-1.7	Fis family transcriptional regulator
PS417_08680		-1.5	-1.8	flagellar biosynthesis protein FlhB
PS417_06500		-1.5	-1.2	hypothetical protein
PS417_00625		-1.5	-2.9	taurine dioxygenase
PS417_03300		-1.5	-2.0	alanine acetyltransferase
PS417_17240		-1.4	-1.6	trigger factor
PS417_19600		-1.4	-1.0	exonuclease
PS417_23835		-1.4	-2.7	hypothetical protein
PS417_11865		-1.4	-1.6	xylose isomerase
PS417_11380		-1.4	-1.6	peptidylprolyl isomerase
PS417_08090		-1.4	-0.8	3-oxoacyl-ACP reductase
PS417_13075		-1.4	-1.3	hypothetical protein
PS417_16775		-1.4	-2.1	branched-chain amino acid ABC transporter ATP-binding protein
PS417_21430		-1.4	-1.0	3-oxoacyl-ACP synthase
PS417_12840		-1.4	-2.0	TetR family transcriptional regulator
PS417_12565		-1.3	-1.8	2-dehydro-3-deoxygluconokinase
PS417_00900		-1.3	-1.6	4-aminobutyrate aminotransferase
PS417_27640		-1.3	-1.0	TetR family transcriptional regulator
PS417_19675		-1.3	-2.7	chemotaxis protein CheY
PS417_14835		-1.3	-2.4	amidase
PS417_20340		-1.3	-1.9	hypothetical protein
PS417_13010		-1.3	-1.7	alpha/beta hydrolase
PS417_14305		-1.3	-1.7	hydroxyproline-2-epimerase
PS417_24125		-1.3	-3.4	hypothetical protein
PS417_05500		-1.3	-1.8	2,3-diketo-5-methylthio-1-phosphopentane phosphatase
PS417_25380		-1.3	-2.2	hypothetical protein
PS417_09545		-1.3	-1.8	aldehyde-activating protein
PS417_01270		-1.3	-1.4	iron ABC transporter substrate-binding protein
PS417_27490		-1.3	-1.1	hypothetical protein
PS417_21400		-1.3	-3.2	TetR family transcriptional regulator
PS417_03875		-1.3	-1.2	membrane protein
PS417_12535		-1.3	-1.5	nitrilase
PS417_12380		-1.3	-3.7	peptidase S54
PS417_15435		-1.2	-2.5	metallophosphatase
PS417_25310		-1.2	-2.4	hypothetical protein
PS417_26755		-1.2	-2.0	nucleoside-triphosphate diphosphatase
PS417_23915		-1.2	-1.9	pantoate--beta-alanine ligase
PS417_00635		-1.2	-1.7	sulfonate ABC transporter ATP-binding protein
PS417_23095		-1.2	-0.8	exodeoxyribonuclease
PS417_08730		-1.2	-1.3	cytochrome C
PS417_24630		-1.2	-0.9	ATP-binding protein
PS417_17305		-1.2	-1.0	hypothetical protein
PS417_26815		-1.2	-1.5	peptidase M16
PS417_13400		-1.2	-3.0	pirin
PS417_00845		-1.2	-1.4	transcriptional regulator
PS417_11420		-1.2	-1.8	potassium transporter KefB
PS417_19350		-1.2	-2.1	GTP cyclohydrolase
PS417_26695		-1.2	-1.0	uracil phosphoribosyltransferase
PS417_16720		-1.2	-0.9	membrane protein
PS417_25225		-1.2	-1.2	MFS transporter
PS417_21695		-1.2	-1.7	succinylglutamate-semialdehyde dehydrogenase
PS417_17430		-1.1	-1.7	aldehyde dehydrogenase
PS417_15285		-1.1	-0.8	type VI secretion protein
PS417_19335		-1.1	-1.5	isochorismatase
PS417_05830		-1.1	-1.5	hypothetical protein
PS417_06245		-1.1	-0.9	zinc metallopeptidase RseP
PS417_11475		-1.1	-1.8	membrane protein
PS417_06835		-1.1	-1.7	phospholipase
PS417_11810		-1.1	-1.9	oxidoreductase
PS417_23600		-1.1	-3.8	RpiR family transcriptional regulator
PS417_23310		-1.1	-3.0	glyoxalase
PS417_13185		-1.1	-1.1	RND transporter
PS417_23755		-1.1	-1.5	membrane protein
PS417_14940		-1.1	-0.9	LysR family transcriptional regulator
PS417_04875		-1.1	-0.8	molybdenum cofactor biosynthesis protein MoaE
PS417_00510		-1.1	-0.9	membrane protein
PS417_23490		-1.1	-0.9	dihydrofolate reductase
PS417_24355		-1.1	-1.4	MFS transporter
PS417_27135		-1.1	-0.5	glutamine synthetase
PS417_23825		-1.1	-3.8	penicillin-binding protein
PS417_15775		-1.1	-2.3	short-chain dehydrogenase
PS417_13065		-1.1	-2.8	UDP pyrophosphate phosphatase
PS417_07770		-1.0	-1.0	hypothetical protein
PS417_02255		-1.0	-1.4	lipopolysaccharide kinase
PS417_06675		-1.0	-1.7	ATP-dependent helicase
PS417_05960		-1.0	-2.3	chemotaxis protein
PS417_11760		-1.0	-2.1	Fis family transcriptional regulator
PS417_15885		-1.0	-1.0	GCN5 family acetyltransferase
PS417_21830		-1.0	-1.6	TetR family transcriptional regulator
PS417_11375		-1.0	-2.1	hypothetical protein
PS417_19615		-1.0	-2.6	chemotaxis protein CheW
PS417_01685		-1.0	-1.2	membrane protein
PS417_01030		-1.0	-0.9	glutamine ABC transporter substrate-binding protein
PS417_12710		-1.0	-2.5	ABC transporter for D-Mannitol and D-Sorbitol, permease component 2 (from data)
PS417_16490		-1.0	-0.6	cell division protein FtsK
PS417_20725		-1.0	-1.2	cbb3-type cytochrome c oxidase subunit II
PS417_22705		-1.0	-1.0	glycerol-3-phosphate ABC transporter substrate-binding protein
PS417_26155		-1.0	-1.5	hypothetical protein
PS417_03005		-1.0	-3.7	arginine decarboxylase
PS417_03705		-1.0	-1.7	2-alkenal reductase
PS417_21840		-1.0	-2.4	chemotaxis protein
PS417_07870		-1.0	-1.4	hypothetical protein
PS417_19805		-1.0	-1.0	flagellar M-ring protein FliF
PS417_06125		-1.0	-1.8	hypothetical protein
PS417_19930		-1.0	-2.0	DNA methyltransferase
PS417_01095		-1.0	-0.7	amino acid ABC transporter ATP-binding protein
PS417_21655		-1.0	-0.6	aspartate kinase
PS417_00065		-1.0	-0.9	3-methyladenine DNA glycosylase
PS417_01735		-1.0	-1.7	ABC transporter permease
PS417_22190		-1.0	-3.4	diguanylate cyclase
PS417_26990		-1.0	-0.3	RNA pyrophosphohydrolase
PS417_07640		-0.9	-2.1	glyceraldehyde-3-phosphate dehydrogenase
PS417_10490		-0.9	-1.7	delta-aminolevulinic acid dehydratase
PS417_15305		-0.9	-1.3	type VI secretion protein
PS417_14260		-0.9	-1.8	phosphate ABC transporter permease
PS417_14890		-0.9	-1.5	LysR family transcriptional regulator
PS417_09580		-0.9	-2.1	tyrosyl-trna synthetase
PS417_12990		-0.9	-1.5	nucleoside hydrolase
PS417_03790		-0.9	-1.8	pilus assembly protein PilW
PS417_22025		-0.9	-2.3	LysR family transcriptional regulator
PS417_14395		-0.9	-1.6	fe2+ zn2+ uptake regulation protein
PS417_00085		-0.9	-1.2	16S rRNA methyltransferase
PS417_05135		-0.9	-3.2	nucleoid-associated protein
PS417_06730		-0.9	-0.8	3-carboxy-cis,cis-muconate cycloisomerase
PS417_19305		-0.9	-2.3	acireductone dioxygenase
PS417_04935		-0.9	-3.2	hypothetical protein
PS417_06540		-0.9	-0.8	membrane protein
PS417_15560		-0.9	-1.8	hypothetical protein
PS417_02630		-0.9	-1.4	NAD synthetase
PS417_04975		-0.9	-2.3	response regulator receiver protein
PS417_06395		-0.9	-1.3	amino acid transporter
PS417_05025		-0.9	-1.1	maleylacetoacetate isomerase
PS417_05475		-0.9	-1.2	arginase
PS417_24575		-0.9	-0.8	hypothetical protein
PS417_00590		-0.9	-1.1	5S ribosomal RNA
PS417_19610		-0.9	-1.2	molybdenum cofactor sulfurase
PS417_17440		-0.9	-1.0	beta-lactamase
PS417_22270		-0.9	-1.4	hypothetical protein
PS417_15865		-0.9	-1.8	hypothetical protein
PS417_08540		-0.9	-1.5	RNA helicase
PS417_07095		-0.9	-2.3	histidine kinase
PS417_20670		-0.9	-2.5	glycosyl transferase family 2
PS417_21380		-0.8	-1.6	GntR family transcriptional regulator
PS417_10810		-0.8	-1.0	hypothetical protein
PS417_19910		-0.8	-2.2	aromatic amino acid aminotransferase
PS417_03685		-0.8	-2.0	FAD-dependent oxidoreductase
PS417_01600		-0.8	-2.6	peptidase M23
PS417_19270		-0.8	-1.3	hypothetical protein
PS417_13575		-0.8	-1.5	succinylglutamate desuccinylase
PS417_28030		-0.8	-1.4	hypothetical protein
PS417_26750		-0.8	-2.2	homoserine acetyltransferase
PS417_09065		-0.8	-2.2	short-chain dehydrogenase
PS417_19605		-0.8	-0.5	hypothetical protein
PS417_10025		-0.8	-0.8	bacteriophage lambda NinG family protein
PS417_10330		-0.8	-1.5	histidine kinase
PS417_02045		-0.8	-1.6	3-oxoacyl-ACP synthase

Specific Phenotypes

None in this experiment

For Pseudomonas simiae WCS417 in phage experiments