Experiment set25IT034 for Pseudomonas simiae WCS417

200 most important genes:

gene	name	fitness	t score	description
PS417_24705		-5.0	-2.5	D-alanyl-D-alanine carboxypeptidase
PS417_19625		-4.8	-3.6	histidine kinase
PS417_19630		-4.7	-2.6	LuxR family transcriptional regulator
PS417_03930		-4.0	-7.2	thymidine phosphorylase
PS417_20585		-3.7	-8.6	chemotaxis protein
PS417_23580		-2.9	-1.0	peptidylprolyl isomerase
PS417_06245		-2.8	-1.3	zinc metallopeptidase RseP
PS417_05975		-2.7	-0.7	chemotaxis protein CheW
PS417_08245		-2.7	-0.9	CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase
PS417_26530		-2.6	-1.6	hypothetical protein
PS417_01920		-2.6	-0.9	ATP-dependent protease subunit HslV
PS417_19605		-2.5	-1.2	hypothetical protein
PS417_24275		-2.4	-15.8	diguanylate phosphodiesterase
PS417_17240		-2.4	-2.1	trigger factor
PS417_19635		-2.3	-9.1	lipid kinase
PS417_02555		-2.3	-10.5	exoribonuclease R
PS417_06540		-2.2	-1.8	membrane protein
PS417_27870		-2.2	-2.4	ATP-dependent DNA helicase RecG
PS417_27300		-2.1	-0.7	cell division protein ZapA
PS417_02280		-2.0	-1.1	GlcNAc-PI de-N-acetylase
PS417_06145		-2.0	-0.9	hypothetical protein
PS417_02805		-1.9	-1.7	urease subunit gamma
PS417_10405		-1.9	-0.9	filamentous hemagglutinin
PS417_26175		-1.9	-0.9	sarcosine oxidase subunit gamma
PS417_02210		-1.8	-2.3	diguanylate cyclase
PS417_05985		-1.8	-1.6	chemotaxis protein CheY
PS417_23900		-1.7	-9.3	poly(A) polymerase
PS417_00755		-1.7	-0.7	biofilm PGA synthesis protein PgaD
PS417_07120		-1.6	-5.0	RNA polymerase sigma-H factor
PS417_22565		-1.6	-0.4	formyltetrahydrofolate deformylase
PS417_24785		-1.6	-2.0	nucleoside-diphosphate sugar epimerase
PS417_09085		-1.6	-1.3	hypothetical protein
PS417_01435		-1.6	-1.0	hypothetical protein
PS417_19600		-1.6	-1.1	exonuclease
PS417_08580		-1.6	-4.1	histidine kinase
PS417_19805		-1.5	-2.3	flagellar M-ring protein FliF
PS417_28325		-1.5	-1.5	phosphoribosyl-AMP cyclohydrolase
PS417_22990		-1.4	-1.1	iron dicitrate transport regulator FecR
PS417_08685		-1.4	-1.0	flagellar hook-length control protein FliK
PS417_00625		-1.4	-2.9	taurine dioxygenase
PS417_08025		-1.4	-1.0	acetylornithine aminotransferase
PS417_17795		-1.4	-1.5	ABC transporter permease
PS417_06095		-1.4	-1.5	energy transducer TonB
PS417_13445		-1.4	-1.5	D-aminopeptidase
PS417_02475		-1.4	-2.2	N-acetylmuramoyl-L-alanine amidase
PS417_26050		-1.4	-4.1	response regulator
PS417_27490		-1.4	-1.7	hypothetical protein
PS417_08590		-1.3	-1.5	hypothetical protein
PS417_27110		-1.3	-2.8	spermidine/putrescine ABC transporter permease
PS417_16400		-1.3	-1.3	NAD(P)H-quinone oxidoreductase
PS417_03560		-1.3	-0.6	GTP-binding protein
PS417_08320		-1.3	-1.8	metal-chelation protein CHAD
PS417_15135		-1.3	-0.7	hypothetical protein
PS417_04390		-1.3	-2.9	toluene tolerance protein
PS417_05810		-1.3	-2.8	damage-inducible protein CinA
PS417_22115		-1.3	-2.4	transcriptional regulator
PS417_19200		-1.3	-1.6	fumarate hydratase
PS417_00630		-1.3	-3.2	nitrate ABC transporter substrate-binding protein
PS417_15285		-1.3	-0.8	type VI secretion protein
PS417_17645		-1.3	-1.4	RND transporter
PS417_25275		-1.2	-1.4	hypothetical protein
PS417_05865		-1.2	-1.4	hypothetical protein
PS417_23755		-1.2	-1.8	membrane protein
PS417_06045		-1.2	-1.7	membrane protein
PS417_04375		-1.2	-1.4	ABC transporter ATP-binding protein
PS417_21400		-1.2	-3.3	TetR family transcriptional regulator
PS417_08410		-1.2	-1.2	hypothetical protein
PS417_12565		-1.2	-1.2	2-dehydro-3-deoxygluconokinase
PS417_07095		-1.2	-3.7	histidine kinase
PS417_01550		-1.2	-4.1	cell envelope biogenesis protein AsmA
PS417_04515		-1.2	-4.0	peptidase M48
PS417_02765		-1.2	-1.0	phosphate starvation-inducible protein PsiF
PS417_13075		-1.2	-1.2	hypothetical protein
PS417_25700		-1.2	-1.5	cyclic AMP receptor protein
PS417_06530		-1.2	-1.5	membrane protein
PS417_03935		-1.2	-2.0	N-acetyl-anhydromuranmyl-L-alanine amidase
PS417_24225		-1.2	-1.2	hypothetical protein
PS417_22935		-1.2	-2.4	hypothetical protein
PS417_16195		-1.2	-0.5	AraC family transcriptional regulator
PS417_20880		-1.2	-0.9	GntR family transcriptional regulator
PS417_25710		-1.1	-0.9	indole-3-glycerol-phosphate synthase
PS417_12540		-1.1	-1.9	hypothetical protein
PS417_14835		-1.1	-1.4	amidase
PS417_21125		-1.1	-3.1	phosphoadenosine phosphosulfate reductase
PS417_08135		-1.1	-2.1	3-phosphoshikimate 1-carboxyvinyltransferase
PS417_27705		-1.1	-1.3	amino acid dehydrogenase
PS417_09930		-1.1	-0.8	hypothetical protein
PS417_20715		-1.1	-1.7	cytochrome Cbb3
PS417_00085		-1.1	-1.5	16S rRNA methyltransferase
PS417_23210		-1.1	-1.3	serine acetyltransferase
PS417_00045		-1.1	-1.4	glycerol acyltransferase
PS417_17805		-1.1	-1.5	microcin B17 processing protein McbC
PS417_28225		-1.1	-0.9	hypothetical protein
PS417_23315		-1.1	-0.9	transcriptional regulator
PS417_17745		-1.0	-2.8	gluconolactonase
PS417_20670		-1.0	-3.1	glycosyl transferase family 2
PS417_24935		-1.0	-0.4	hypothetical protein
PS417_00295		-1.0	-3.1	hypothetical protein
PS417_24500		-1.0	-1.3	DEAD/DEAH box helicase
PS417_06885		-1.0	-2.2	dihydrodipicolinate synthase
PS417_19620		-1.0	-1.1	hypothetical protein
PS417_12280		-1.0	-1.2	MerR family transcriptional regulator
PS417_23825		-1.0	-3.7	penicillin-binding protein
PS417_17325		-1.0	-2.7	dihydropyrimidine dehydrogenase
PS417_26990		-1.0	-0.3	RNA pyrophosphohydrolase
PS417_27085		-1.0	-1.4	AraC family transcriptional regulator
PS417_20660		-1.0	-4.3	hypothetical protein
PS417_20655		-1.0	-4.5	group 1 glycosyl transferase
PS417_20665		-1.0	-3.5	hypothetical protein
PS417_03100		-1.0	-0.8	pilus assembly protein
PS417_18160		-1.0	-1.3	YeeE/YedE
PS417_18595		-1.0	-2.0	3-isopropylmalate dehydratase
PS417_13255		-1.0	-1.3	ABC transporter
PS417_03350		-1.0	-1.5	cytochrome C peroxidase
PS417_09325		-1.0	-2.4	peptidase S41
PS417_23915		-1.0	-1.8	pantoate--beta-alanine ligase
PS417_24650		-0.9	-1.3	membrane protein
PS417_28515		-0.9	-1.9	16S rRNA methyltransferase
PS417_26160		-0.9	-2.2	hypothetical protein
PS417_26345		-0.9	-2.3	choline dehydrogenase
PS417_10130		-0.9	-2.2	hypothetical protein
PS417_28350		-0.9	-3.6	fatty acid methyltransferase
PS417_09290		-0.9	-2.1	catalase
PS417_17675		-0.9	-1.0	ABC transporter
PS417_05905		-0.9	-1.6	hypothetical protein
PS417_02695		-0.9	-1.0	protein hupE
PS417_01115		-0.9	-0.8	serine acetyltransferase
PS417_25030		-0.9	-2.3	hypothetical protein
PS417_17140		-0.9	-1.7	LysR family transcriptional regulator
PS417_28510		-0.9	-2.9	chromosome partitioning protein
PS417_22840		-0.9	-0.7	tRNA-Met
PS417_12455		-0.9	-1.6	hydrolase
PS417_19515		-0.9	-2.2	histidine kinase
PS417_01600		-0.9	-3.0	peptidase M23
PS417_19615		-0.9	-2.9	chemotaxis protein CheW
PS417_06395		-0.9	-1.4	amino acid transporter
PS417_05960		-0.9	-2.1	chemotaxis protein
PS417_13140		-0.9	-1.0	oxidoreductase
PS417_01095		-0.9	-0.8	amino acid ABC transporter ATP-binding protein
PS417_02880		-0.9	-1.3	copper chaperone
PS417_15290		-0.9	-2.0	type VI secretion protein
PS417_09680		-0.9	-1.0	hydrolase
PS417_03795		-0.9	-2.1	pilus assembly protein PilX
PS417_10015		-0.9	-0.7	hypothetical protein
PS417_22495		-0.9	-2.7	histidine triad (HIT) protein
PS417_27715		-0.9	-1.2	Fe-S oxidoreductase
PS417_04915		-0.9	-0.9	glutamine ABC transporter ATP-binding protein
PS417_20570		-0.9	-2.3	3-oxoacyl-ACP synthase
PS417_27135		-0.8	-0.4	glutamine synthetase
PS417_11475		-0.8	-1.7	membrane protein
PS417_17830		-0.8	-1.8	4-hydroxyphenylacetate isomerase
PS417_15780		-0.8	-1.6	membrane protein
PS417_17190		-0.8	-1.6	MarR family transcriptional regulator
PS417_15030		-0.8	-0.8	short-chain dehydrogenase
PS417_15400		-0.8	-0.7	hypothetical protein
PS417_11305		-0.8	-1.5	general secretion pathway protein GspF
PS417_00510		-0.8	-0.6	membrane protein
PS417_24115		-0.8	-1.0	hypothetical protein
PS417_23575		-0.8	-1.4	hypothetical protein
PS417_25975		-0.8	-2.8	Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data)
PS417_11360		-0.8	-1.9	energy transducer TonB
PS417_02775		-0.8	-3.1	heat-shock protein
PS417_01900		-0.8	-2.1	poly(3-hydroxyalkanoate) depolymerase
PS417_09435		-0.8	-1.7	glyoxalase
PS417_22225		-0.8	-3.1	MFS transporter
PS417_14105		-0.8	-1.7	6-O-methylguanine DNA methyltransferase
PS417_13755		-0.8	-1.4	oxidoreductase
PS417_21630		-0.8	-0.7	magnesium transporter
PS417_02255		-0.8	-1.1	lipopolysaccharide kinase
PS417_27665		-0.8	-1.3	diguanylate cyclase
PS417_17930		-0.8	-1.6	aldehyde dehydrogenase
PS417_01195		-0.8	-1.1	RNA-binding protein S4
PS417_13055		-0.8	-0.9	aminotransferase
PS417_21800		-0.8	-2.5	MFS transporter
PS417_03080		-0.8	-1.2	hypothetical protein
PS417_19355		-0.8	-2.8	glutaredoxin
PS417_04820		-0.8	-3.7	poly(beta-D-mannuronate) C5 epimerase
PS417_12485		-0.8	-2.6	hypothetical protein
PS417_06025		-0.8	-1.7	alpha/beta hydrolase
PS417_19215		-0.8	-1.6	polyphosphate kinase
PS417_07160		-0.8	-3.0	glycine cleavage system protein R
PS417_27795		-0.8	-0.2	orotate phosphoribosyltransferase
PS417_26125		-0.8	-1.6	glutathione S-transferase
PS417_07575		-0.8	-1.9	multifunctional fatty acid oxidation complex subunit alpha
PS417_04180		-0.8	-1.7	GntR family transcriptional regulator
PS417_00480		-0.8	-2.2	hypothetical protein
PS417_11415		-0.8	-1.9	hypothetical protein
PS417_18780		-0.8	-0.8	flavin reductase
PS417_02110		-0.8	-1.0	acyl carrier protein
PS417_19595		-0.8	-3.8	3-methylcrotonyl-CoA carboxylase
PS417_05345		-0.8	-1.8	exotoxin
PS417_21360		-0.8	-0.5	termination factor Rho
PS417_12785		-0.8	-2.4	hypothetical protein
PS417_00550		-0.8	-0.6	hypothetical protein
PS417_23950		-0.8	-0.6	polynucleotide phosphorylase/polyadenylase
PS417_12505		-0.8	-1.9	peptidase
PS417_11535		-0.8	-1.4	nicotinate phosphoribosyltransferase
PS417_07940		-0.8	-1.2	hypothetical protein
PS417_11140		-0.8	-2.6	peptide ABC transporter permease
PS417_21995		-0.8	-1.9	hypothetical protein

Specific Phenotypes

None in this experiment

For Pseudomonas simiae WCS417 in phage experiments