Experiment set25IT033 for Pseudomonas simiae WCS417
P. simiae OR Antrim MOI 1
Group: phageMedia: LB_plus_SM_buffer + Kan (50 ug/ml)
Culturing: fluoroDangl_ML3, 48 well microplate; Epoch2, Aerobic, at 30 (C), shaken=double orbital, continuous, 205cpm
By: Vivek on 8/27/22
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride, 100 mM Sodium Chloride, 4 mM Magnesium sulfate, 0.005 vol% Gelatin, 25 mM Tris hydrochloride
Specific Phenotypes
For 1 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Alkanesulfonate assimilation | 1 |
| Taurine Utilization | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| taurine degradation IV | 1 | 1 | 1 |
| superpathway of taurine degradation | 6 | 2 | 1 |