Experiment set25IT030 for Pseudomonas simiae WCS417

200 most important genes:

gene	name	fitness	t score	description
PS417_19625		-4.9	-2.6	histidine kinase
PS417_24705		-4.8	-2.4	D-alanyl-D-alanine carboxypeptidase
PS417_03930		-4.7	-7.8	thymidine phosphorylase
PS417_19630		-4.4	-2.5	LuxR family transcriptional regulator
PS417_02210		-3.9	-5.9	diguanylate cyclase
PS417_11400		-3.8	-1.6	phosphoglycerate mutase
PS417_17240		-3.2	-2.0	trigger factor
PS417_00175		-3.2	-1.1	CigR
PS417_20585		-3.0	-5.0	chemotaxis protein
PS417_02555		-3.0	-15.9	exoribonuclease R
PS417_27870		-3.0	-2.0	ATP-dependent DNA helicase RecG
PS417_03385		-3.0	-1.5	flavin reductase
PS417_15650		-3.0	-1.8	glutamine amidotransferase
PS417_17070		-2.9	-2.1	RNA polymerase subunit sigma-24
PS417_24275		-2.9	-15.3	diguanylate phosphodiesterase
PS417_18310		-2.8	-1.2	hypothetical protein
PS417_26605		-2.8	-1.0	malonate decarboxylase subunit beta
PS417_23580		-2.7	-0.9	peptidylprolyl isomerase
PS417_10025		-2.7	-1.3	bacteriophage lambda NinG family protein
PS417_02805		-2.7	-2.3	urease subunit gamma
PS417_05975		-2.6	-0.6	chemotaxis protein CheW
PS417_21870		-2.6	-2.7	glycerophosphodiester phosphodiesterase
PS417_19635		-2.5	-7.8	lipid kinase
PS417_23950		-2.5	-1.1	polynucleotide phosphorylase/polyadenylase
PS417_18755		-2.5	-1.8	CrtK
PS417_03300		-2.4	-3.3	alanine acetyltransferase
PS417_05160		-2.4	-1.2	DNA polymerase III subunit chi
PS417_19605		-2.3	-1.1	hypothetical protein
PS417_17000		-2.2	-2.6	MerR family transcriptional regulator
PS417_20030		-2.2	-2.1	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
PS417_22060		-2.1	-1.2	hypothetical protein
PS417_27585		-2.1	-1.3	diaminopimelate epimerase
PS417_18070		-2.1	-1.0	general secretion pathway protein GspH
PS417_07305		-1.9	-1.8	3-beta hydroxysteroid dehydrogenase
PS417_02475		-1.9	-2.3	N-acetylmuramoyl-L-alanine amidase
PS417_12650		-1.9	-2.6	magnesium transporter
PS417_21625		-1.9	-0.8	DNA-binding protein
PS417_20025		-1.9	-1.2	alpha-ribazole phosphatase
PS417_01510		-1.9	-2.1	hypothetical protein
PS417_00045		-1.9	-1.8	glycerol acyltransferase
PS417_15285		-1.8	-1.0	type VI secretion protein
PS417_05985		-1.8	-2.1	chemotaxis protein CheY
PS417_22175		-1.7	-1.8	amino acid transporter LysE
PS417_17780		-1.7	-1.2	Ais protein
PS417_15090		-1.7	-1.8	hypothetical protein
PS417_07870		-1.7	-2.2	hypothetical protein
PS417_26345		-1.6	-3.6	choline dehydrogenase
PS417_03630		-1.6	-2.5	hypothetical protein
PS417_15935		-1.6	-1.5	Rrf2 family transcriptional regulator
PS417_07095		-1.6	-4.4	histidine kinase
PS417_00625		-1.6	-3.5	taurine dioxygenase
PS417_03380		-1.6	-0.9	hypothetical protein
PS417_08410		-1.5	-1.2	hypothetical protein
PS417_02225		-1.5	-1.4	bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
PS417_00065		-1.5	-1.3	3-methyladenine DNA glycosylase
PS417_20670		-1.5	-4.8	glycosyl transferase family 2
PS417_06145		-1.5	-0.8	hypothetical protein
PS417_08730		-1.4	-1.4	cytochrome C
PS417_27505		-1.4	-2.6	transcriptional regulator
PS417_23900		-1.4	-7.8	poly(A) polymerase
PS417_00630		-1.4	-3.2	nitrate ABC transporter substrate-binding protein
PS417_01030		-1.4	-1.1	glutamine ABC transporter substrate-binding protein
PS417_20855		-1.4	-0.7	hypothetical protein
PS417_05535		-1.4	-1.2	Fis family transcriptional regulator
PS417_24785		-1.4	-2.0	nucleoside-diphosphate sugar epimerase
PS417_21915		-1.4	-2.3	LysR family transcriptional regulator
PS417_22445		-1.4	-1.7	ATP-dependent DNA helicase RuvB
PS417_02950		-1.4	-2.3	tRNA-dihydrouridine synthase B
PS417_12595		-1.4	-1.5	transcriptional regulator
PS417_01645		-1.4	-2.2	cupin
PS417_28020		-1.4	-2.4	chorismate--pyruvate lyase
PS417_09085		-1.4	-1.1	hypothetical protein
PS417_08245		-1.4	-0.7	CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase
PS417_03815		-1.4	-1.7	DNA transporter
PS417_19805		-1.4	-1.7	flagellar M-ring protein FliF
PS417_28515		-1.3	-2.4	16S rRNA methyltransferase
PS417_04390		-1.3	-1.9	toluene tolerance protein
PS417_02895		-1.3	-1.0	precorrin-6Y C5,15-methyltransferase
PS417_00080		-1.3	-3.6	potassium transporter peripheral membrane component
PS417_01290		-1.3	-1.4	ADP-ribose diphosphatase
PS417_12565		-1.3	-1.3	2-dehydro-3-deoxygluconokinase
PS417_05135		-1.3	-4.3	nucleoid-associated protein
PS417_19610		-1.3	-1.5	molybdenum cofactor sulfurase
PS417_27865		-1.3	-1.2	LysR family transcriptional regulator
PS417_19800		-1.3	-1.5	flagellar motor switch protein FliG
PS417_22205		-1.3	-4.6	potassium transporter TrkH
PS417_27300		-1.3	-0.5	cell division protein ZapA
PS417_10675		-1.3	-0.6	TetR family transcriptional regulator
PS417_18455		-1.2	-1.5	hypothetical protein
PS417_05140		-1.2	-1.7	dipicolinate synthase
PS417_10575		-1.2	-1.6	DNA alkylation repair protein
PS417_21120		-1.2	-2.6	phosphoserine phosphatase
PS417_23025		-1.2	-2.9	murein transglycosylase
PS417_26695		-1.2	-1.1	uracil phosphoribosyltransferase
PS417_06780		-1.2	-1.9	TetR family transcriptional regulator
PS417_17490		-1.2	-1.5	ABC transporter ATP-binding protein
PS417_00705		-1.2	-1.2	MarR family transcriptional regulator
PS417_08620		-1.2	-0.7	hypothetical protein
PS417_21070		-1.2	-1.7	aconitate hydratase
PS417_08580		-1.2	-3.6	histidine kinase
PS417_01915		-1.2	-0.3	ATP-dependent protease ATP-binding subunit HslU
PS417_26390		-1.1	-1.6	acyltransferase
PS417_09160		-1.1	-1.6	GNAT family acetyltransferase
PS417_19615		-1.1	-3.6	chemotaxis protein CheW
PS417_06845		-1.1	-1.0	lipoprotein
PS417_18760		-1.1	-2.0	hypothetical protein
PS417_13870		-1.1	-1.8	hypothetical protein
PS417_08930		-1.1	-2.6	hypothetical protein
PS417_05830		-1.1	-1.4	hypothetical protein
PS417_14855		-1.1	-2.3	gluconolactonase
PS417_04595		-1.1	-1.0	cell division protein MraZ
PS417_01340		-1.1	-3.0	agmatine deiminase
PS417_12005		-1.1	-2.1	hypothetical protein
PS417_26805		-1.1	-0.8	cell division protein FtsE
PS417_13055		-1.1	-1.1	aminotransferase
PS417_08540		-1.1	-1.8	RNA helicase
PS417_02070		-1.1	-0.6	membrane protein
PS417_23825		-1.1	-4.1	penicillin-binding protein
PS417_03285		-1.1	-2.5	chromosome partitioning protein
PS417_01920		-1.1	-0.7	ATP-dependent protease subunit HslV
PS417_10920		-1.1	-1.9	LysR family transcriptional regulator
PS417_15425		-1.1	-3.0	acetyltransferase
PS417_23820		-1.1	-3.0	hypothetical protein
PS417_06885		-1.1	-2.5	dihydrodipicolinate synthase
PS417_19505		-1.1	-1.3	2,4-diaminobutyrate 4-aminotransferase
PS417_19335		-1.0	-1.6	isochorismatase
PS417_02045		-1.0	-2.9	3-oxoacyl-ACP synthase
PS417_08320		-1.0	-1.8	metal-chelation protein CHAD
PS417_26530		-1.0	-0.9	hypothetical protein
PS417_28425		-1.0	-1.8	lysine transporter LysE
PS417_24270		-1.0	-2.3	threonine transporter RhtB
PS417_05840		-1.0	-1.5	LuxR family transcriptional regulator
PS417_07410		-1.0	-1.6	hypothetical protein
PS417_15875		-1.0	-1.3	LuxR family transcriptional regulator
PS417_08350		-1.0	-2.0	preprotein translocase subunit TatD
PS417_14240		-1.0	-2.0	isochorismatase
PS417_24500		-1.0	-1.3	DEAD/DEAH box helicase
PS417_04375		-1.0	-1.1	ABC transporter ATP-binding protein
PS417_11375		-1.0	-1.8	hypothetical protein
PS417_28190		-1.0	-2.0	amino acid ABC transporter substrate-binding protein
PS417_06245		-1.0	-0.8	zinc metallopeptidase RseP
PS417_15105		-1.0	-3.3	membrane protein
PS417_26535		-1.0	-2.3	cytochrome B561
PS417_08990		-1.0	-1.5	ABC transporter substrate-binding protein
PS417_06165		-1.0	-2.8	thiamine biosynthesis protein ThiF
PS417_07470		-1.0	-0.8	hypothetical protein
PS417_10425		-1.0	-0.8	hypothetical protein
PS417_26050		-1.0	-2.9	response regulator
PS417_13990		-0.9	-1.5	LysR family transcriptional regulator
PS417_18105		-0.9	-0.7	iron-dicitrate transporter substrate-binding subunit
PS417_00180		-0.9	-1.0	tryptophan synthase subunit alpha
PS417_27105		-0.9	-2.4	spermidine/putrescine ABC transporter permease
PS417_23755		-0.9	-1.0	membrane protein
PS417_24355		-0.9	-1.2	MFS transporter
PS417_06895		-0.9	-1.4	DNA-binding protein
PS417_13755		-0.9	-1.7	oxidoreductase
PS417_05510		-0.9	-2.0	alpha/beta hydrolase
PS417_00650		-0.9	-0.6	LysR family transcriptional regulator
PS417_03550		-0.9	-1.7	hypothetical protein
PS417_18540		-0.9	-1.3	colicin V production CvpA
PS417_26990		-0.9	-0.3	RNA pyrophosphohydrolase
PS417_26520		-0.9	-1.7	amino acid ABC transporter substrate-binding protein
PS417_06445		-0.9	-1.2	iron-siderophore ABC transporter permease
PS417_02280		-0.9	-0.7	GlcNAc-PI de-N-acetylase
PS417_01995		-0.9	-1.4	hypothetical protein
PS417_18200		-0.9	-1.4	glyoxalase
PS417_10600		-0.9	-0.8	hypothetical protein
PS417_26900		-0.9	-1.0	L-cystine transporter tcyP
PS417_11440		-0.9	-1.1	hypothetical protein
PS417_08435		-0.9	-1.2	pilus assembly protein PilZ
PS417_27715		-0.9	-1.9	Fe-S oxidoreductase
PS417_27045		-0.9	-1.7	ATPase
PS417_14890		-0.9	-1.2	LysR family transcriptional regulator
PS417_20610		-0.9	-0.8	hypothetical protein
PS417_26875		-0.9	-3.8	histidine kinase
PS417_16175		-0.9	-2.6	porin
PS417_00670		-0.9	-1.3	RNA polymerase sigma factor
PS417_11755		-0.9	-2.5	diacetyl reductase
PS417_02255		-0.9	-1.2	lipopolysaccharide kinase
PS417_07630		-0.9	-2.9	hypothetical protein
PS417_26260		-0.9	-1.0	hypothetical protein
PS417_05095		-0.9	-2.2	membrane protein
PS417_19515		-0.9	-2.2	histidine kinase
PS417_20485		-0.8	-2.5	hypothetical protein
PS417_04220		-0.8	-0.6	4-carboxymuconolactone decarboxylase
PS417_13510		-0.8	-0.5	polyketide cyclase
PS417_10095		-0.8	-0.8	hypothetical protein
PS417_16160		-0.8	-1.7	ABC transporter substrate-binding protein
PS417_19620		-0.8	-0.9	hypothetical protein
PS417_04185		-0.8	-1.5	hypothetical protein
PS417_24600		-0.8	-3.1	hydrogenase
PS417_22715		-0.8	-1.2	heme oxygenase
PS417_08940		-0.8	-1.6	thioesterase
PS417_23210		-0.8	-1.0	serine acetyltransferase
PS417_18545		-0.8	-1.0	cell division protein
PS417_23095		-0.8	-0.6	exodeoxyribonuclease
PS417_20660		-0.8	-3.7	hypothetical protein
PS417_23510		-0.8	-2.1	HopJ type III effector protein
PS417_16475		-0.8	-1.5	camphor resistance protein CrcB
PS417_12940		-0.8	-2.4	sugar ABC transporter substrate-binding protein

Specific Phenotypes

None in this experiment

For Pseudomonas simiae WCS417 in phage experiments