Experiment set24S540 for Agrobacterium fabrum C58

Compare to:

LB with Streptomycin sulfate salt 200 ug/mL

200 most important genes:

  gene name fitness t score description  
Atu1243 -6.0 -9.9 streptomycin resistance protein compare
Atu2682 -5.7 -3.9 hypothetical protein compare
Atu2442 -4.9 -3.3 hypothetical protein compare
Atu4173 -4.2 -2.9 phosphoenolpyruvate-protein phosphotransferase compare
Atu0353 -4.1 -9.6 acetyltransferase compare
Atu0029 -4.0 -3.9 S-adenosylhomocysteine hydrolase compare
Atu2772 -3.9 -5.4 Invasion protein A compare
Atu0302 -3.5 -12.5 tetrapyrrole methylase family protein compare
Atu1131 -3.4 -6.9 outer membrane protein compare
Atu4728 -3.4 -16.7 ABC transporter permease compare
Atu2193 -3.4 -1.6 hypothetical protein compare
Atu2114 -3.4 -5.4 molecular chaperone, DnaJ family compare
Atu1677 -3.4 -2.3 queuine tRNA-ribosyltransferase compare
Atu4148 -3.3 -6.9 UDP-glucuronic acid epimerase compare
Atu8167 -3.2 -4.4 putative transmembrane protein compare
Atu1062 -3.1 -2.6 phosphatidylserine synthase compare
Atu0388 -3.1 -8.9 two component sensor kinase compare
Atu2070 -3.0 -8.6 aminopeptidase P compare
Atu2169 -2.9 -3.9 hypothetical protein compare
Atu0031 -2.9 -1.4 PTS system, IIA component compare
Atu0331 -2.9 -2.0 sigma-54 modulation protein compare
Atu2584 -2.8 -6.2 hypothetical protein compare
Atu2722 -2.7 -6.8 porin compare
Atu1753 -2.7 -10.6 hypothetical protein compare
Atu2592 -2.7 -7.2 hypothetical protein compare
Atu0657 -2.7 -10.1 hypothetical protein compare
Atu0184 -2.6 -3.2 glucokinase compare
Atu4149 -2.6 -11.1 UDP-glucose 6-dehydrogenase compare
Atu2113 -2.6 -3.1 N-acetylmuramoyl-L-alanine amidase compare
Atu0784 -2.5 -3.7 hypothetical protein compare
Atu2800 -2.5 -3.7 precorrin-3B C17-methyltransferase compare
Atu2583 -2.5 -12.1 glycosyltransferase compare
Atu1204 -2.5 -4.0 potassium uptake protein compare
Atu0908 -2.4 -5.7 transcriptional regulator compare
Atu2045 -2.4 -5.2 HFLK protein compare
Atu2591 -2.4 -8.3 glucosyltransferase compare
Atu0690 -2.4 -2.2 hypothetical protein compare
Atu2044 -2.3 -4.3 HFLC protein compare
Atu4072 -2.3 -1.5 nodulation protein N compare
Atu0977 -2.3 -1.6 serine protease DO-like protease compare
Atu2590 -2.2 -7.5 hypothetical protein compare
Atu3469 -2.2 -2.6 phosphoglyceromutase compare
Atu1449 -2.2 -4.3 potassium uptake protein compare
Atu1364 -2.2 -3.8 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2692 -2.1 -3.4 intracellular septation protein compare
Atu2801 -2.0 -3.7 precorrin-2 C20 methyltransferase compare
Atu2184 -2.0 -4.8 transcriptional regulator, AsnC family compare
Atu3727 -2.0 -2.6 hypothetical protein compare
Atu0044 -1.9 -5.9 heat shock protein hslV compare
Atu0769 -1.9 -1.7 protoheme IX farnesyltransferase compare
Atu3707 -1.9 -1.2 phosphoserine aminotransferase compare
Atu2207 -1.9 -2.8 two component sensor kinase compare
Atu2555 -1.9 -2.5 L-lysine 2,3-aminomutase compare
Atu0045 -1.8 -7.8 heat shock chaperone compare
Atu2585 -1.8 -5.1 hypothetical protein compare
Atu3008 -1.8 -1.2 hypothetical protein compare
Atu2072 -1.8 -4.5 ribosomal protein L11 methyltransferase compare
Atu0972 -1.8 -1.7 lipA protein compare
Atu3609 -1.8 -2.9 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu2582 -1.8 -6.9 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2124 -1.8 -5.0 transcriptional regulator, ArsR family compare
Atu0050 -1.7 -3.4 two component response regulator compare
Atu0687 -1.6 -2.5 hypothetical protein compare
Atu2554 -1.6 -1.5 lysyl-tRNA synthetase compare
Atu0008 -1.6 -6.0 hypothetical protein compare
Atu3120 -1.6 -1.7 hypothetical protein compare
Atu2428 -1.6 -6.3 exopolysaccharide production protein PssB compare
Atu8161 -1.6 -2.0 hypothetical protein compare
Atu2807 -1.6 -5.1 cob(I)alamin adenosyltransferase compare
Atu0538 -1.6 -2.5 hypothetical protein compare
Atu0876 -1.5 -1.4 superoxide dismutase compare
Atu2577 -1.5 -10.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu1103 -1.5 -1.7 rRNA-adenine N6,N6-dimethyltransferase compare
Atu8023 -1.5 -1.7 hypothetical protein compare
Atu1175 -1.5 -1.8 hypothetical protein compare
Atu0536 -1.5 -5.1 hypothetical protein compare
Atu1686 -1.5 -9.6 peptidyl-prolyl cis-trans isomerse D compare
Atu1714 -1.5 -1.4 exonuclease III compare
Atu1445 -1.5 -4.4 two component sensor kinase compare
Atu3496 -1.5 -3.5 hypothetical protein compare
Atu1447 -1.4 -1.6 two component sensor kinase compare
Atu6098 -1.4 -0.9 transcriptional regulator, HTH family compare
Atu2798 -1.4 -2.9 precorrin-6y methyltransferase compare
Atu4792 -1.4 -1.9 hypothetical protein compare
Atu0344 -1.4 -2.2 hypothetical protein compare
Atu1380 -1.4 -7.7 zinc metallopeptidase compare
Atu2804 -1.4 -6.5 cobaltochelatase subunit compare
Atu0272 -1.4 -5.6 transcriptional regulator, MarR family compare
Atu2166 -1.4 -4.2 hypothetical protein compare
Atu2832 -1.4 -2.1 tRNA modification GTPase compare
Atu2802 -1.3 -5.6 precorrin-8X methylmutase compare
Atu2664 -1.3 -7.7 peptidyl-dipeptidase compare
Atu1678 -1.3 -3.4 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1357 -1.3 -7.6 hypothetical protein compare
Atu8020 -1.3 -3.7 hypothetical protein compare
Atu0803 -1.3 -9.3 pyruvate,orthophosphate dikinase compare
Atu0658 -1.3 -5.6 phosphate permease compare
Atu1225 -1.3 -1.4 hypothetical protein compare
Atu3706 -1.3 -3.2 D-3-phosphoglycerate dehydrogenase compare
Atu0477 -1.3 -1.9 hypothetical protein compare
Atu2799 -1.3 -2.8 precorrin-6x reductase compare
Atu2808 -1.2 -4.6 cobyric acid synthase compare
Atu3578 -1.2 -1.9 glycerol-3-phosphate dehydrogenase compare
Atu1503 -1.2 -1.1 hypothetical protein compare
Atu2123 -1.2 -3.4 methylenetetrahydrofolate reductase compare
Atu2803 -1.2 -2.9 Cobalamin biosynthesis associated protein compare
Atu2067 -1.2 -1.0 hypothetical protein compare
Atu1369 -1.2 -3.4 HIT family protein compare
Atu2333 -1.2 -5.2 ATP-dependent RNA helicase compare
Atu1760 -1.2 -0.9 hypothetical protein compare
Atu0995 -1.2 -5.5 hypothetical protein compare
Atu1360 -1.2 -6.0 hypothetical protein compare
Atu2640 -1.1 -1.3 hypothetical protein compare
Atu3572 -1.1 -5.4 transcriptional regulator compare
Atu0043 -1.1 -1.6 imidazoleglycerol-phosphate dehydratase compare
Atu4686 -1.1 -2.0 hypothetical protein compare
Atu0354 -1.1 -1.0 ferric uptake regulator compare
Atu0846 -1.1 -2.7 transcriptional regulator, MarR family compare
Atu4217 -1.1 -0.7 TetR family transcriptional regulator compare
Atu0188 -1.1 -0.7 ABC transporter, membrane spanning protein (peptide) compare
Atu0142 -1.1 -2.6 cytochrome o ubiquinol oxidase subunit II compare
Atu2753 -1.1 -7.1 ATP-dependent helicase compare
Atu2614 -1.1 -4.6 hypothetical protein compare
Atu1356 -1.1 -5.2 hypothetical protein compare
Atu0759 -1.1 -5.0 hypothetical protein compare
Atu2746 -1.1 -2.1 hypothetical protein compare
Atu5045 -1.1 -1.3 hypothetical protein compare
Atu2796 -1.0 -5.0 precorrin-4 C11-methyltransferase compare
Atu2809 -1.0 -4.4 cobalamin biosynthesis protein compare
Atu4610 -1.0 -5.5 sugar nucleotide epimerase/dehydratase compare
Atu1446 -1.0 -1.5 two component response regulator compare
Atu2511 -1.0 -4.9 D-alanine aminotransferase compare
Atu0225 -1.0 -0.9 hypothetical protein compare
Atu0795 -1.0 -1.6 hypothetical protein compare
Atu2057 -1.0 -1.1 DNA helicase II compare
Atu2673 -1.0 -5.3 hypothetical protein compare
Atu2766 -1.0 -8.0 NAD-glutamate dehydrogenase compare
Atu2155 -1.0 -7.2 methionine synthase compare
Atu1354 -1.0 -0.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2194 -1.0 -2.5 hypothetical protein compare
Atu2793 -1.0 -2.8 cobyrinic acid a,c-diamide synthase compare
Atu2685 -1.0 -5.7 aconitate hydratase compare
Atu1134 -1.0 -5.4 hypothetical protein compare
Atu4075 -1.0 -4.0 glycogen synthase compare
Atu2205 -1.0 -2.5 transcriptional regulator, MarR family compare
Atu4176 -1.0 -5.1 hypothetical protein compare
Atu4605 -0.9 -2.5 IS3 family transposase compare
Atu0007 -0.9 -3.7 hypothetical protein compare
Atu0292 -0.9 -3.5 iron-sulfur cluster binding protein compare
Atu2335 -0.9 -1.0 hypothetical protein compare
Atu2810 -0.9 -4.4 cobalamin biosynthetic protein compare
Atu1725 -0.9 -2.4 hypothetical protein compare
Atu0524 -0.9 -3.8 transcriptional regulator, LuxR family compare
Atu1670 -0.9 -6.0 alcohol dehydrogenase class III compare
Atu4502 -0.9 -3.4 cobalamin synthesis protein compare
Atu0211 -0.9 -4.6 hypothetical protein compare
Atu4669 -0.9 -3.9 hypothetical protein compare
Atu1327 -0.9 -2.7 NADH-ubiquinone oxidoreductase compare
Atu3466 -0.9 -1.3 ArsR family transcriptional regulator compare
Atu0689 -0.9 -3.8 ribosomal large subunit pseudouridine synthase B compare
Atu1182 -0.9 -1.5 hypothetical protein compare
Atu2083 -0.9 -1.7 DNA repair protein RecN compare
Atu0009 -0.9 -3.8 membrane-bound lytic murein transglycosylase compare
Atu1683 -0.9 -0.8 hypothetical protein compare
Atu3798 -0.9 -3.3 TetR family transcriptional regulator compare
Atu2068 -0.8 -2.1 hypothetical protein compare
Atu2479 -0.8 -2.8 tRNA-Gly compare
Atu4616 -0.8 -0.7 dTDP-4-dehydrorhamnose reductase compare
Atu2776 -0.8 -3.2 hypothetical protein compare
Atu2450 -0.8 -2.1 hypothetical protein compare
Atu1778 -0.8 -5.8 transcription-repair coupling factor compare
Atu0079 -0.8 -3.6 Atu0079-1 mutant of pfkB family carbohydrate kinase compare
Atu1019 -0.8 -1.7 hypothetical protein compare
Atu3887 -0.8 -2.1 small heat shock protein compare
Atu2292 -0.8 -5.8 adenine deaminase compare
Atu4099 -0.8 -2.9 hypothetical protein compare
Atu0274 -0.8 -4.5 aminopeptidase compare
Atu0290 -0.8 -3.7 rare lipoprotein A compare
Atu3202 -0.8 -5.8 RND multidrug efflux transporter compare
Atu4677 -0.8 -1.1 hypothetical protein compare
Atu0125 -0.8 -4.0 peptide methionine sulfoxide reductase compare
Atu4205 -0.8 -3.3 TetR family transcriptional regulator compare
Atu8052 -0.8 -1.4 hypothetical protein compare
Atu8162 -0.8 -1.1 hypothetical protein compare
Atu3465 -0.8 -1.8 metallo-beta-lactamase superfamily protein compare
Atu0525 -0.8 -2.9 transcriptional regulator, LuxR family compare
Atu1472 -0.8 -2.6 hydrolase compare
Atu2633 -0.8 -0.7 RhtB family transporter compare
Atu2352 -0.7 -1.3 hypothetical protein compare
Atu3750 -0.7 -1.4 thiamine-phosphate pyrophosphorylase compare
Atu0922 -0.7 -1.9 hypothetical protein compare
Atu0832 -0.7 -3.9 chloride channel protein compare
Atu2821 -0.7 -2.8 transcriptional regulator, GntR family compare
Atu4582 -0.7 -2.0 ferredoxin compare
Atu0189 -0.7 -0.6 ABC transporter, membrane spanning protein (peptide) compare
Atu4530 -0.7 -3.0 TetR family transcriptional regulator compare
Atu2041 -0.7 -1.6 acetyltransferase compare
Atu0587 -0.7 -3.5 teichoic acid biosynthesis protein compare
Atu1232 -0.7 -1.3 hypothetical protein compare
Atu2343 -0.7 -2.5 acetyltransferase compare


Specific Phenotypes

For 39 genes in this experiment

For stress Streptomycin sulfate salt in Agrobacterium fabrum C58

For stress Streptomycin sulfate salt across organisms