Experiment set24S536 for Agrobacterium fabrum C58

Compare to:

LB with Timentin 6.25 ug/mL

200 most important genes:

  gene name fitness t score description  
Atu0933 -6.7 -6.5 beta-lactamase class D compare
Atu2590 -6.5 -8.9 hypothetical protein compare
Atu4149 -6.1 -6.0 UDP-glucose 6-dehydrogenase compare
Atu2584 -5.9 -4.1 hypothetical protein compare
Atu2577 -5.8 -6.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu2591 -5.6 -6.7 glucosyltransferase compare
Atu2582 -5.5 -5.4 UDP-glucose/GDP-mannose dehydrogenase compare
Atu4148 -5.1 -3.5 UDP-glucuronic acid epimerase compare
Atu2583 -5.1 -9.8 glycosyltransferase compare
Atu8180 -5.1 -8.5 hypothetical protein compare
Atu2592 -4.9 -4.8 hypothetical protein compare
Atu0036 -4.9 -3.3 hypothetical protein compare
Atu1099 -4.7 -5.5 hypothetical protein compare
Atu2585 -4.6 -3.2 hypothetical protein compare
Atu1131 -4.3 -7.2 outer membrane protein compare
Atu3779 -4.3 -8.2 lytic murein transglycosylase compare
Atu0784 -3.8 -3.2 hypothetical protein compare
Atu4317 -3.8 -2.6 TetR family transcriptional regulator compare
Atu0422 -3.5 -3.3 ABC transporter, membrane spanning protein compare
Atu0978 -3.3 -3.2 two component response regulator compare
Atu1149 -3.3 -2.0 adenylate cyclase compare
Atu1446 -3.0 -2.0 two component response regulator compare
Atu3712 -2.8 -1.9 hypothetical protein compare
Atu1098 -2.6 -5.8 hypothetical protein compare
Atu3598 -2.6 -2.4 thiol:disulfide interchange protein compare
Atu0050 -2.5 -4.1 two component response regulator compare
Atu0186 -2.5 -8.7 penicillin-insensitive murein endopeptidase compare
Atu1439 -2.5 -2.2 hypothetical protein compare
Atu0972 -2.4 -1.6 lipA protein compare
Atu1793 -2.4 -7.7 phosphatidylcholine synthase compare
Atu8095 -2.3 -8.0 hypothetical protein compare
Atu8147 -2.2 -10.2 hypothetical protein compare
Atu0769 -2.2 -2.0 protoheme IX farnesyltransferase compare
Atu3210 -2.1 -10.7 ftsk cell division protein compare
Atu1701 -2.1 -2.7 protein-L-isoaspartate O-methyltransferase compare
Atu0331 -2.1 -2.4 sigma-54 modulation protein compare
Atu0189 -2.1 -1.3 ABC transporter, membrane spanning protein (peptide) compare
Atu1774 -2.0 -1.4 ABC transporter, substrate binding protein (peptide) compare
Atu0421 -2.0 -1.9 ABC transporter, membrane spanning protein compare
Atu0051 -2.0 -4.2 two component sensor kinase compare
Atu1327 -2.0 -3.1 NADH-ubiquinone oxidoreductase compare
Atu0184 -2.0 -4.0 glucokinase compare
Atu0923 -2.0 -3.5 hypothetical protein compare
Atu8167 -1.9 -7.2 putative transmembrane protein compare
Atu2006 -1.8 -7.7 molecular chaperone, DnaJ family compare
Atu2281 -1.8 -6.8 ABC transporter, substrate binding protein (proline/glycine betaine) compare
Atu1162 -1.8 -8.8 hypothetical protein compare
Atu1844 -1.7 -2.7 Phosphoribosylformylglycinamidine synthetase compare
Atu3469 -1.7 -2.5 phosphoglyceromutase compare
Atu2207 -1.7 -3.3 two component sensor kinase compare
Atu3634 -1.7 -4.2 penicillin-binding protein dacf precursor compare
Atu2280 -1.6 -8.1 ABC transporter, membrane spanning protein (proline/glycine betaine) compare
Atu1644 -1.6 -2.2 hypothetical protein compare
Atu0190 -1.6 -1.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4610 -1.6 -7.7 sugar nucleotide epimerase/dehydratase compare
Atu1891 -1.6 -2.9 cobalamin biosynthesis protein compare
Atu0257 -1.6 -7.6 hypothetical protein compare
Atu2746 -1.5 -3.1 hypothetical protein compare
Atu1546 -1.5 -4.5 transcriptional regulator, MerR family compare
Atu0979 -1.5 -3.8 two component sensor kinase compare
Atu0388 -1.5 -7.9 two component sensor kinase compare
Atu2620 -1.5 -1.5 hypothetical protein compare
Atu1647 -1.5 -5.4 ABC transporter, membrane spanning protein compare
Atu0499 -1.5 -7.0 hypothetical protein compare
Atu1380 -1.5 -6.4 zinc metallopeptidase compare
Atu3754 -1.5 -5.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0755 -1.5 -2.7 hypothetical protein compare
Atu2184 -1.4 -3.7 transcriptional regulator, AsnC family compare
Atu0290 -1.4 -5.9 rare lipoprotein A compare
Atu4217 -1.4 -0.9 TetR family transcriptional regulator compare
Atu2722 -1.4 -5.4 porin compare
Atu3739 -1.4 -3.0 phosphoglycerate kinase compare
Atu0188 -1.4 -0.9 ABC transporter, membrane spanning protein (peptide) compare
Atu2710 -1.4 -0.9 hypothetical protein compare
Atu1204 -1.4 -4.0 potassium uptake protein compare
Atu3707 -1.4 -1.2 phosphoserine aminotransferase compare
Atu8161 -1.4 -1.9 hypothetical protein compare
Atu1333 -1.4 -2.7 outer membrane protein compare
Atu1620 -1.4 -7.0 triosephosphate isomerase compare
Atu3608 -1.3 -4.2 hypothetical protein compare
Atu1445 -1.3 -4.6 two component sensor kinase compare
Atu3183 -1.3 -1.2 hypothetical protein compare
Atu3613 -1.3 -3.6 hypothetical protein compare
Atu0030 -1.3 -1.5 phosphocarrier protein HPr compare
Atu1645 -1.3 -4.1 ABC transporter, substrate binding protein compare
Atu2662 -1.2 -1.3 acetyltransferase compare
Atu2824 -1.2 -2.1 hypothetical protein compare
Atu3249 -1.2 -4.4 septum formation inhibitor compare
Atu2279 -1.2 -5.1 ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) compare
Atu0894 -1.2 -0.8 ABC transporter, membrane spanning protein compare
Atu0756 -1.2 -4.9 phosphoglycerate mutase compare
Atu8087 -1.2 -1.0 putative peptidoglycan binding protein compare
Atu1127 -1.2 -1.6 molybdopterin converting factor small subunit compare
Atu4477 -1.2 -5.2 TetR family transcriptional regulator compare
Atu4077 -1.2 -4.9 glycogen branching protein compare
Atu4176 -1.2 -5.0 hypothetical protein compare
Atu0187 -1.2 -6.7 ABC transporter, substrate binding protein (peptide) compare
Atu2472 -1.1 -1.9 hypothetical protein compare
Atu1679 -1.1 -1.7 peptidyl prolyl cis-trans isomerase compare
Atu0660 -1.1 -5.3 hydrolase compare
Atu1221 -1.1 -3.6 hypothetical protein compare
Atu2040 -1.1 -2.9 phosphoserine phosphatase compare
Atu0636 -1.1 -4.3 hypothetical protein compare
Atu1646 -1.1 -2.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu8138 -1.1 -1.3 hypothetical protein compare
Atu2067 -1.1 -0.9 hypothetical protein compare
Atu1449 -1.1 -3.7 potassium uptake protein compare
Atu0043 -1.0 -1.7 imidazoleglycerol-phosphate dehydratase compare
Atu2640 -1.0 -1.7 hypothetical protein compare
Atu4608 -1.0 -7.0 hypothetical protein compare
Atu2215 -1.0 -4.9 hypothetical protein compare
Atu2117 -1.0 -3.3 lytic murein transglycosylase compare
Atu1182 -1.0 -1.7 hypothetical protein compare
Atu0141 -1.0 -1.2 cytochrome O ubiquinol oxidase subunit I compare
Atu2554 -1.0 -1.6 lysyl-tRNA synthetase compare
Atu3289 -1.0 -1.8 thiamine-phosphate pyrophosphorylase compare
Atu2614 -1.0 -4.4 hypothetical protein compare
Atu0718 -1.0 -2.6 hypothetical protein compare
Atu0780 -1.0 -5.9 hypothetical protein compare
Atu1803 -1.0 -2.7 cold shock protein compare
Atu3248 -0.9 -3.7 cell division inhibitor compare
Atu0674 -0.9 -2.4 hypothetical protein compare
Atu2127 -0.9 -3.6 L-carnitine dehydratase compare
Atu4613 -0.9 -6.4 glycosyltransferase compare
Atu4617 -0.9 -5.3 dTDP-D-glucose-4,6-dehydratase compare
Atu1804 -0.9 -4.8 hypothetical protein compare
Atu1592 -0.9 -3.8 hypothetical protein compare
Atu1566 -0.9 -1.0 hypothetical protein compare
Atu0269 -0.9 -2.6 exodeoxyribonuclease VII large subunit compare
Atu1845 -0.9 -2.7 phosphoribosylformylglycinamidine synthase I compare
Atu4161 -0.9 -1.4 hypothetical protein compare
Atu0662 -0.9 -3.3 transcriptional regulator, GntR family compare
Atu1874 -0.9 -1.5 RecA protein compare
Atu8054 -0.9 -0.8 hypothetical protein compare
Atu8096 -0.9 -1.3 hypothetical protein compare
Atu1291 -0.9 -1.8 hypothetical protein compare
Atu1019 -0.9 -1.9 hypothetical protein compare
Atu1778 -0.9 -6.0 transcription-repair coupling factor compare
Atu0137 -0.9 -4.5 phosphopentomutase compare
Atu2692 -0.9 -2.2 intracellular septation protein compare
Atu3616 -0.9 -4.6 hypothetical protein compare
Atu2057 -0.9 -1.2 DNA helicase II compare
Atu3578 -0.8 -1.7 glycerol-3-phosphate dehydrogenase compare
Atu8023 -0.8 -1.1 hypothetical protein compare
Atu2183 -0.8 -4.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2349 -0.8 -1.4 hypothetical protein compare
Atu3697 -0.8 -2.1 ATP-dependent protease LA 2 compare
Atu3740 -0.8 -4.0 fructose bisphosphate aldolase compare
Atu0845 -0.8 -3.4 hypothetical protein compare
Atu4072 -0.8 -0.9 nodulation protein N compare
Atu0399 -0.8 -2.9 dihydroorotase compare
Atu4609 -0.8 -5.2 glycosyltransferase compare
Atu1634 -0.8 -1.4 hypothetical protein compare
Atu2766 -0.8 -6.8 NAD-glutamate dehydrogenase compare
Atu1621 -0.8 -3.2 hypothetical protein compare
Atu1023 -0.8 -1.5 hypothetical protein compare
Atu0375 -0.8 -1.4 small heat shock protein compare
Atu0687 -0.8 -1.3 hypothetical protein compare
Atu3466 -0.8 -1.9 ArsR family transcriptional regulator compare
Atu4540 -0.8 -2.0 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0298 -0.8 -3.5 orotidine 5 compare
Atu2803 -0.8 -2.3 Cobalamin biosynthesis associated protein compare
Atu1260 -0.8 -1.2 hypothetical protein compare
Atu3202 -0.8 -5.9 RND multidrug efflux transporter compare
Atu4615 -0.8 -4.5 glucose-1-phosphate thymidylyltransferase compare
Atu0488 -0.7 -1.4 hypothetical protein compare
Atu8191 -0.7 -1.3 hypothetical protein compare
Atu3777 -0.7 -4.8 hypothetical protein compare
Atu8129 -0.7 -3.6 hypothetical protein compare
Atu1018 -0.7 -3.3 hypothetical protein compare
Atu0149 -0.7 -2.4 enoyl-(acyl-carrier-protein) reductase compare
Atu0635 -0.7 -2.4 hypothetical protein compare
Atu0898 -0.7 -4.8 hypothetical protein compare
Atu3311 -0.7 -5.2 phosphomannose isomerase compare
Atu3755 -0.7 -2.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0126 -0.7 -2.9 membrane lipoprotein compare
Atu2439 -0.7 -0.4 hypothetical protein compare
Atu1868 -0.7 -2.8 tRNA/rRNA methyltransferase compare
Atu2058 -0.7 -1.4 hypothetical protein compare
Atu1357 -0.7 -4.6 hypothetical protein compare
Atu1779 -0.7 -1.3 hypothetical protein compare
Atu8052 -0.7 -1.4 hypothetical protein compare
Atu6098 -0.7 -0.6 transcriptional regulator, HTH family compare
Atu4078 -0.7 -4.5 glycogen phosphorylase compare
Atu1356 -0.7 -3.0 hypothetical protein compare
Atu2115 -0.7 -3.9 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0328 -0.7 -2.7 heat-inducible transcription repressor compare
Atu4673 -0.7 -3.2 cell division protein FtsZ compare
Atu2807 -0.7 -2.3 cob(I)alamin adenosyltransferase compare
Atu1542 -0.7 -2.2 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2555 -0.7 -1.3 L-lysine 2,3-aminomutase compare
Atu3353 -0.7 -3.8 mannose-1-phosphate guanylyltransferase compare
Atu1694 -0.7 -1.1 hypothetical protein compare
Atu0826 -0.6 -4.2 hypothetical protein compare
Atu3144 -0.6 -2.3 GntR family transcriptional regulator compare
Atu4144 -0.6 -0.7 hypothetical protein compare
Atu2370 -0.6 -3.9 hypothetical protein compare
Atu4522 -0.6 -3.8 hypothetical protein compare
Atu4505 -0.6 -3.5 LacI family transcriptional regulator compare
Atu2059 -0.6 -3.6 transcriptional regulator, TetR family compare


Specific Phenotypes

For 26 genes in this experiment

For stress Timentin in Agrobacterium fabrum C58

For stress Timentin across organisms