Experiment set24S536 for Agrobacterium fabrum C58

Compare to:

LB with Timentin 6.25 ug/mL

200 most detrimental genes:

  gene name fitness t score description  
Atu0995 +3.2 21.6 hypothetical protein compare
Atu2578 +3.0 18.5 cAMP-dependent protein kinase regulatory subunit compare
Atu2579 +2.7 17.3 metal dependant beta lactamase protein compare
Atu3201 +2.6 15.8 TetR family transcriptional regulator compare
Atu2113 +2.6 9.8 N-acetylmuramoyl-L-alanine amidase compare
Atu1021 +2.4 7.3 outer membrane protein compare
Atu1739 +2.1 8.0 permease compare
Atu2787 +1.8 2.0 hypothetical protein compare
Atu4056 +1.6 7.9 succinoglycan biosynthesis protein compare
Atu4616 +1.4 2.1 dTDP-4-dehydrorhamnose reductase compare
Atu1177 +1.4 5.3 hypothetical protein compare
Atu0039 +1.3 1.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu1705 +1.3 5.0 SEC-independent protein translocase protein compare
Atu2122 +1.3 5.4 lytic murein transglycosylase compare
Atu1028 +1.3 2.7 hypothetical protein compare
Atu1134 +1.3 9.1 hypothetical protein compare
Atu2125 +1.3 1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu4171 +1.2 8.5 cold-shock dead-box protein A compare
Atu2831 +1.2 3.7 glucose inhibited division protein A compare
Atu1709 +1.2 7.4 glycosyl hydrolase compare
Atu1030 +1.2 1.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0925 +1.1 2.9 hypothetical protein compare
Atu1838 +1.1 2.4 ABC transporter, substrate binding protein (amino acid) compare
Atu4179 +1.1 4.4 hypothetical protein compare
Atu3327 +1.1 5.9 succinoglycan exopolysaccharide synthesis protein compare
Atu4773 +1.1 1.6 two component response regulator compare
Atu0876 +1.1 1.3 superoxide dismutase compare
Atu8088 +1.0 2.0 hypothetical protein compare
Atu1219 +1.0 1.2 hypothetical protein compare
Atu2028 +1.0 2.2 transcriptional regulator, ArsR family compare
Atu0040 +1.0 0.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4053 +1.0 2.5 succinoglycan biosynthesis protein compare
Atu0986 +1.0 1.3 hypothetical protein compare
Atu1308 +1.0 3.5 aspartate carbamoyl transferase catalytic subunit compare
Atu2433 +1.0 1.8 hypothetical protein compare
Atu1470 +1.0 1.2 Camphor resistance protein compare
Atu4055 +0.9 2.6 endo-1,3-1,4-beta-glycanase compare
Atu1103 +0.9 3.3 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1615 +0.9 6.0 hypothetical protein compare
Atu0106 +0.9 4.5 cold shock protein compare
Atu4527 +0.9 1.6 hypothetical protein compare
Atu1307 +0.9 3.2 dihydroorotase compare
Atu0977 +0.9 2.6 serine protease DO-like protease compare
Atu3623 +0.9 4.2 DnaJ family molecular chaperone compare
Atu0233 +0.9 6.2 lysozyme compare
Atu2770 +0.9 4.6 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu0525 +0.9 3.2 transcriptional regulator, LuxR family compare
Atu0211 +0.9 4.7 hypothetical protein compare
Atu0813 +0.9 6.2 hypothetical protein compare
Atu2432 +0.8 1.6 hypothetical protein compare
Atu2606 +0.8 4.5 transcriptional regulator, GntR family compare
Atu0842 +0.8 1.8 hypothetical protein compare
Atu3496 +0.8 3.3 hypothetical protein compare
Atu1525 +0.8 2.9 hypothetical protein compare
Atu2626 +0.8 4.7 hypothetical protein compare
Atu0115 +0.8 1.0 hypothetical protein compare
Atu0524 +0.8 5.5 transcriptional regulator, LuxR family compare
Atu2394 +0.8 3.1 Regulator of Biofilm formation, Fnr Family compare
Atu1484 +0.8 2.9 transcriptional regulator compare
Atu1810 +0.7 0.4 hypothetical protein compare
Atu1213 +0.7 1.9 hypothetical protein compare
Atu3331 +0.7 2.8 hypothetical protein compare
Atu3015 +0.7 4.1 hypothetical protein compare
Atu1373 +0.7 4.0 hypothetical protein compare
Atu2335 +0.7 1.1 hypothetical protein compare
Atu3721 +0.7 1.1 hypothetical protein compare
Atu1983 +0.7 4.3 hypothetical protein compare
Atu0048 +0.7 4.4 hypothetical protein compare
Atu4187 +0.7 1.1 tRNA-Met compare
Atu1326 +0.7 2.6 acetyltransferase compare
Atu1176 +0.7 2.9 hypothetical protein compare
Atu0360 +0.7 4.3 apolipoprotein N-acyltransferase compare
Atu0566 +0.7 1.6 hypothetical protein compare
Atu4063 +0.7 4.0 O-linked GlcNAc transferase compare
Atu8082 +0.7 1.4 hypothetical protein compare
Atu2478 +0.7 2.1 hypothetical protein compare
Atu1241 +0.6 1.9 hypothetical protein compare
Atu2114 +0.6 3.1 molecular chaperone, DnaJ family compare
Atu5540 +0.6 1.0 hypothetical protein compare
Atu1602 +0.6 3.6 transcriptional activator, Crp family compare
Atu2608 +0.6 2.7 N-acetylglucosamine-6-phosphate deacetylase compare
Atu4502 +0.6 3.7 cobalamin synthesis protein compare
Atu5045 +0.6 1.3 hypothetical protein compare
Atu8038 +0.6 3.5 hypothetical protein compare
Atu0025 +0.6 1.2 hypothetical protein compare
Atu0297 +0.6 1.9 hypothetical protein compare
Atu8085 +0.6 2.7 hypothetical protein compare
Atu3521 +0.6 2.5 permease compare
Atu1606 +0.6 2.6 methionine aminopeptidase compare
Atu4133 +0.6 2.0 hypothetical protein compare
Atu0046 +0.6 4.0 hypothetical protein compare
Atu2381 +0.6 1.8 hypothetical protein compare
Atu1354 +0.6 0.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3663 +0.6 0.7 hypothetical protein compare
Atu1726 +0.6 2.9 hypothetical protein compare
Atu4139 +0.6 1.4 hypothetical protein compare
Atu2737 +0.6 2.6 oxidoredutase compare
Atu0606 +0.6 1.1 hypothetical protein compare
Atu1123 +0.6 2.8 hypothetical protein compare
Atu1836 +0.5 1.3 hypothetical protein compare
Atu0117 +0.5 2.2 hypothetical protein compare
Atu3609 +0.5 2.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu1508 +0.5 2.2 hypothetical protein compare
Atu4099 +0.5 3.0 hypothetical protein compare
Atu1472 +0.5 2.7 hydrolase compare
Atu2273 +0.5 2.4 hypothetical protein compare
Atu1351 +0.5 2.8 hypothetical protein compare
Atu2730 +0.5 4.4 beta (1-->2) glucan biosynthesis protein compare
Atu2609 +0.5 2.9 transcriptional regulator, ROK family compare
Atu1483 +0.5 2.2 cytochrome b561 compare
Atu0888 +0.5 3.2 transcriptional regulator, MerR family compare
Atu3022 +0.5 2.9 sugar ABC transporter permease compare
Atu2607 +0.5 2.6 glucosamine--fructose-6-phosphate aminotransferase compare
Atu1915 +0.5 4.0 htrA family protein compare
Atu3256 +0.5 2.4 zinc-binding dehydrogenase compare
Atu2378 +0.5 1.5 hypothetical protein compare
Atu3794 +0.5 3.3 FadR family transcriptional regulator compare
Atu0926 +0.5 1.6 hypothetical protein compare
Atu2192 +0.5 0.7 hypothetical protein compare
Atu0988 +0.5 3.3 molecular chaperone, Hsp70 family compare
Atu4675 +0.5 2.0 dihydrodipicolinate synthase compare
Atu1714 +0.5 0.8 exonuclease III compare
Atu5158 +0.5 2.4 hypothetical protein compare
Atu4122 +0.5 2.5 LysR family transcriptional regulator compare
Atu6138 +0.5 3.1 Repressor of the acc and arc operons compare
Atu2133 +0.5 3.0 hypothetical protein compare
Atu8018 +0.5 0.7 hypothetical protein compare
Atu3730 +0.5 0.6 hypothetical protein compare
Atu0357 +0.5 2.8 phosphate starvation inducible protein compare
Atu4328 +0.5 2.3 hypothetical protein compare
Atu0883 +0.5 1.4 hypothetical protein compare
Atu3482 +0.5 2.2 pantoate--beta-alanine ligase compare
Atu1752 +0.5 2.6 hypothetical protein compare
Atu4884 +0.5 1.8 hypothetical protein compare
Atu2056 +0.5 1.5 hypothetical protein compare
Atu3746 +0.5 2.3 hypothetical protein compare
Atu4890 +0.5 1.2 IS426 transposase compare
Atu3019 +0.5 3.2 hypothetical protein compare
Atu0759 +0.5 2.9 hypothetical protein compare
Atu3400 +0.5 1.9 hypothetical protein compare
Atu1892 +0.5 1.5 hypothetical protein compare
Atu1754 +0.5 1.0 hypothetical protein compare
Atu1054 +0.5 2.0 hypothetical protein compare
Atu3332 +0.5 2.8 hypothetical protein compare
Atu1008 +0.5 1.9 hypothetical protein compare
Atu0577 +0.5 2.1 FLAF protein compare
Atu4893 +0.5 1.6 hypothetical protein compare
Atu0670 +0.5 3.0 3-methyladenine-DNA glycosylase compare
Atu1346 +0.5 2.0 phenazine antibiotic biosynthesis related protein compare
Atu3495 +0.5 3.1 diguanylate cyclase compare
Atu0295 +0.5 0.9 hypothetical protein compare
Atu4501 +0.5 2.7 hypothetical protein compare
Atu0706 +0.5 2.6 transcriptional regulator, IclR family compare
Atu1225 +0.5 0.8 hypothetical protein compare
Atu0010 +0.5 3.4 hypothetical protein compare
Atu1466 +0.4 0.9 hypothetical protein compare
Atu2380 +0.4 1.3 hypothetical protein compare
Atu4362 +0.4 2.1 hypothetical protein compare
Atu3747 +0.4 2.9 hypothetical protein compare
Atu8036 +0.4 1.3 protein YBGT-like protein compare
Atu5451 +0.4 0.5 hypothetical protein compare
Atu1867 +0.4 2.6 glutamate racemase compare
Atu2534 +0.4 2.5 outer membrane protein compare
Atu0744 +0.4 1.7 hypothetical protein compare
Atu4896 +0.4 0.7 acetyltransferase compare
Atu4136 +0.4 2.3 hypothetical protein compare
Atu4880 +0.4 2.8 AraC family transcriptional regulator compare
Atu0267 +0.4 1.5 hypothetical protein compare
Atu0503 +0.4 3.2 enoyl-CoA hydratase compare
Atu0535 +0.4 1.4 hypothetical protein compare
Atu1258 +0.4 2.2 ATP-dependent Clp protease, proteolytic subunit compare
Atu2825 +0.4 2.6 Sun protein compare
Atu0996 +0.4 1.9 zinc-binding dehydrogenase compare
Atu1896 +0.4 2.0 hypothetical protein compare
Atu3822 +0.4 1.9 hypothetical protein compare
Atu1070 +0.4 2.1 hypothetical protein compare
Atu1085 +0.4 1.9 transcriptional regulator, MarR family compare
Atu0573 +0.4 2.1 transcriptional regulator compare
Atu1057 +0.4 2.5 ADP-Ribose Pyrophosphatase compare
Atu1457 +0.4 0.9 hypothetical protein compare
Atu4889 +0.4 1.9 hypothetical protein compare
Atu1009 +0.4 1.2 hypothetical protein compare
Atu1883 +0.4 2.3 hypothetical protein compare
Atu1910 +0.4 2.4 hypothetical protein compare
Atu2672 +0.4 1.7 hypothetical protein compare
Atu0346 +0.4 1.0 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0701 +0.4 2.9 GGDEF family protein compare
Atu4486 +0.4 1.4 nitroreductase compare
Atu2187 +0.4 1.6 transcriptional regulator, ArsR family compare
Atu4874 +0.4 2.7 hypothetical protein compare
Atu2268 +0.4 2.4 ECF family sigma factor compare
Atu1864 +0.4 1.5 putative homoserine/homoserine lactone efflux protein compare
Atu2141 +0.4 1.3 hypothetical protein compare
Atu2777 +0.4 2.3 hypothetical protein compare
Atu5121 +0.4 2.8 two component response regulator compare
Atu4095 +0.4 1.2 hypothetical protein compare
Atu0094 +0.4 2.1 hypothetical protein compare
Atu2077 +0.4 0.8 DNA polymerase III, epsilon subunit compare
Atu3764 +0.4 2.7 sigma 54 dependent transcriptional activator compare
Atu1637 +0.4 1.5 hypothetical protein compare


Specific Phenotypes

For 26 genes in this experiment

For stress Timentin in Agrobacterium fabrum C58

For stress Timentin across organisms