Experiment set24S534 for Agrobacterium fabrum C58

Compare to:

LB with Timentin 3.125 ug/mL

200 most important genes:

  gene name fitness t score description  
Atu2591 -3.7 -9.9 glucosyltransferase compare
Atu2583 -3.4 -13.2 glycosyltransferase compare
Atu2592 -3.3 -7.2 hypothetical protein compare
Atu2582 -3.2 -8.8 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2590 -3.2 -10.5 hypothetical protein compare
Atu4148 -3.1 -6.3 UDP-glucuronic acid epimerase compare
Atu2577 -3.1 -16.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu2584 -3.0 -6.7 hypothetical protein compare
Atu4149 -3.0 -11.5 UDP-glucose 6-dehydrogenase compare
Atu1110 -2.9 -2.8 cytosol aminopeptidase compare
Atu2585 -2.7 -6.3 hypothetical protein compare
Atu0972 -2.3 -1.6 lipA protein compare
Atu1099 -2.3 -5.9 hypothetical protein compare
Atu3120 -2.3 -2.1 hypothetical protein compare
Atu3779 -2.1 -8.7 lytic murein transglycosylase compare
Atu1774 -2.0 -1.3 ABC transporter, substrate binding protein (peptide) compare
Atu2634 -1.9 -2.5 hypothetical protein compare
Atu0189 -1.9 -1.2 ABC transporter, membrane spanning protein (peptide) compare
Atu1646 -1.7 -3.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu3730 -1.7 -1.4 hypothetical protein compare
Atu0784 -1.5 -3.0 hypothetical protein compare
Atu2379 -1.5 -8.0 phosphomannomutase compare
Atu0331 -1.4 -1.8 sigma-54 modulation protein compare
Atu1850 -1.4 -2.4 phosphoribosylformylglycinamidine synthetase II compare
Atu1131 -1.4 -6.0 outer membrane protein compare
Atu0933 -1.4 -5.0 beta-lactamase class D compare
Atu4610 -1.4 -7.0 sugar nucleotide epimerase/dehydratase compare
Atu3469 -1.4 -2.1 phosphoglyceromutase compare
Atu2684 -1.4 -1.2 hypothetical protein compare
Atu3712 -1.3 -1.4 hypothetical protein compare
Atu4317 -1.3 -1.9 TetR family transcriptional regulator compare
Atu1162 -1.3 -5.6 hypothetical protein compare
Atu4217 -1.3 -0.8 TetR family transcriptional regulator compare
Atu2710 -1.3 -0.9 hypothetical protein compare
Atu0190 -1.3 -1.5 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0188 -1.2 -0.8 ABC transporter, membrane spanning protein (peptide) compare
Atu1542 -1.2 -4.3 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0422 -1.2 -1.8 ABC transporter, membrane spanning protein compare
Atu2800 -1.2 -2.5 precorrin-3B C17-methyltransferase compare
Atu0486 -1.2 -3.1 dihydroorotate dehydrogenase compare
Atu4618 -1.2 -5.7 dTDP-rhamnose-3,5-epimerase compare
Atu3183 -1.1 -1.0 hypothetical protein compare
Atu0184 -1.1 -2.6 glucokinase compare
Atu0086 -1.1 -1.0 ribosome-binding factor A compare
Atu0225 -1.1 -1.0 hypothetical protein compare
Atu0434 -1.1 -1.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1515 -1.1 -3.5 hypothetical protein compare
Atu3001 -1.1 -1.4 hypothetical protein compare
Atu1213 -1.1 -1.8 hypothetical protein compare
Atu4166 -1.0 -1.2 UDP-glucose 4-epimerase compare
Atu1354 -1.0 -0.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3739 -1.0 -2.2 phosphoglycerate kinase compare
Atu3121 -1.0 -0.9 cold shock protein compare
Atu1356 -1.0 -5.0 hypothetical protein compare
Atu1588 -1.0 -2.6 homoserine dehydrogenase compare
Atu8180 -1.0 -4.0 hypothetical protein compare
Atu0030 -1.0 -1.2 phosphocarrier protein HPr compare
Atu3210 -1.0 -5.8 ftsk cell division protein compare
Atu4418 -1.0 -3.0 glutaryl-CoA dehydrogenase compare
Atu5125 -1.0 -2.3 GntR family transcriptional regulator compare
Atu2484 -0.9 -1.4 hypothetical protein compare
Atu4614 -0.9 -4.3 glycosyltransferase compare
Atu8162 -0.9 -1.3 hypothetical protein compare
Atu2057 -0.9 -1.2 DNA helicase II compare
Atu8096 -0.9 -1.3 hypothetical protein compare
Atu1357 -0.9 -6.1 hypothetical protein compare
Atu3311 -0.9 -6.3 phosphomannose isomerase compare
Atu3999 -0.9 -1.6 dithiobiotin synthetase compare
Atu1149 -0.9 -1.2 adenylate cyclase compare
Atu2115 -0.9 -4.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2125 -0.9 -0.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu1327 -0.9 -1.4 NADH-ubiquinone oxidoreductase compare
Atu0477 -0.9 -1.5 hypothetical protein compare
Atu3733 -0.9 -1.2 hypothetical protein compare
Atu3668 -0.9 -2.1 siderophore biosynthesis protein compare
Atu1140 -0.9 -2.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2554 -0.8 -1.3 lysyl-tRNA synthetase compare
Atu8147 -0.8 -5.3 hypothetical protein compare
Atu0399 -0.8 -2.6 dihydroorotase compare
Atu3740 -0.8 -4.3 fructose bisphosphate aldolase compare
Atu1447 -0.8 -1.1 two component sensor kinase compare
Atu0031 -0.8 -0.6 PTS system, IIA component compare
Atu1677 -0.8 -1.9 queuine tRNA-ribosyltransferase compare
Atu2183 -0.8 -4.7 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2207 -0.8 -1.9 two component sensor kinase compare
Atu0755 -0.8 -1.9 hypothetical protein compare
Atu0854 -0.8 -2.6 hypothetical protein compare
Atu8023 -0.8 -1.4 hypothetical protein compare
Atu1221 -0.8 -3.3 hypothetical protein compare
Atu1801 -0.8 -1.8 hypothetical protein compare
Atu0499 -0.8 -3.9 hypothetical protein compare
Atu1364 -0.8 -2.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3706 -0.8 -2.3 D-3-phosphoglycerate dehydrogenase compare
Atu4540 -0.8 -1.9 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0141 -0.8 -0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu0290 -0.7 -3.0 rare lipoprotein A compare
Atu0953 -0.7 -0.6 hypothetical protein compare
Atu0660 -0.7 -3.7 hydrolase compare
Atu1503 -0.7 -0.8 hypothetical protein compare
Atu2803 -0.7 -2.0 Cobalamin biosynthesis associated protein compare
Atu8032 -0.7 -1.6 hypothetical protein compare
Atu0043 -0.7 -1.2 imidazoleglycerol-phosphate dehydratase compare
Atu1127 -0.7 -0.9 molybdopterin converting factor small subunit compare
Atu2532 -0.7 -2.7 transcriptional regulator, MarR family compare
Atu1026 -0.7 -1.1 hypothetical protein compare
Atu1620 -0.7 -4.0 triosephosphate isomerase compare
Atu4617 -0.7 -3.7 dTDP-D-glucose-4,6-dehydratase compare
Atu2692 -0.7 -1.8 intracellular septation protein compare
Atu0912 -0.7 -0.9 Na+/H+ antiporter compare
Atu4613 -0.7 -4.5 glycosyltransferase compare
Atu4077 -0.7 -3.0 glycogen branching protein compare
Atu2793 -0.7 -2.1 cobyrinic acid a,c-diamide synthase compare
Atu0257 -0.7 -3.7 hypothetical protein compare
Atu8191 -0.7 -1.2 hypothetical protein compare
Atu0300 -0.7 -2.7 methyltransferase compare
Atu0421 -0.7 -0.8 ABC transporter, membrane spanning protein compare
Atu1098 -0.7 -2.6 hypothetical protein compare
Atu4838 -0.7 -2.6 outer membrane lipoprotein compare
Atu3353 -0.6 -4.2 mannose-1-phosphate guanylyltransferase compare
Atu3110 -0.6 -2.6 hypothetical protein compare
Atu1647 -0.6 -2.7 ABC transporter, membrane spanning protein compare
Atu1019 -0.6 -1.5 hypothetical protein compare
Atu2270 -0.6 -1.1 ATP-dependent Clp protease, proteolytic subunit compare
Atu2205 -0.6 -2.0 transcriptional regulator, MarR family compare
Atu1846 -0.6 -0.9 hypothetical protein compare
Atu0269 -0.6 -1.8 exodeoxyribonuclease VII large subunit compare
Atu3567 -0.6 -2.6 hypothetical protein compare
Atu3754 -0.6 -2.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3466 -0.6 -1.2 ArsR family transcriptional regulator compare
Atu3486 -0.6 -1.0 DeoR family transcriptional regulator compare
Atu4608 -0.6 -4.3 hypothetical protein compare
Atu2259 -0.6 -2.6 MFS permease compare
Atu1527 -0.6 -1.7 nitrogen fixation protein FixS compare
Atu2040 -0.6 -1.3 phosphoserine phosphatase compare
Atu1645 -0.6 -2.2 ABC transporter, substrate binding protein compare
Atu1589 -0.6 -2.0 aminotransferase, class I compare
Atu1446 -0.6 -1.0 two component response regulator compare
Atu2799 -0.6 -1.6 precorrin-6x reductase compare
Atu2036 -0.6 -0.6 acetolactate synthase III, large subunit compare
Atu8123 -0.6 -2.2 hypothetical protein compare
Atu0149 -0.6 -1.7 enoyl-(acyl-carrier-protein) reductase compare
Atu4437 -0.6 -1.9 LysR family transcriptional regulator compare
Atu4279 -0.6 -2.6 LysR family transcriptional regulator compare
Atu1445 -0.6 -1.5 two component sensor kinase compare
Atu1724 -0.6 -1.8 hypothetical protein compare
Atu2472 -0.6 -1.1 hypothetical protein compare
Atu0322 -0.6 -2.9 enoyl CoA hydratase compare
Atu8094 -0.6 -1.7 hypothetical protein compare
Atu4040 -0.6 -1.2 hypothetical protein compare
Atu1323 -0.6 -1.0 hypothetical protein compare
Atu0185 -0.6 -2.2 methylglyoxal synthase compare
Atu2633 -0.6 -1.0 RhtB family transporter compare
Atu8176 -0.6 -1.1 hypothetical protein compare
Atu1075 -0.6 -2.4 amidophosphoribosyltransferase compare
Atu0908 -0.6 -1.2 transcriptional regulator compare
Atu1469 -0.6 -1.4 hypothetical protein compare
Atu0647 -0.6 -2.2 phosphoribosylamine--glycine ligase compare
Atu1205 -0.5 -3.6 threonine dehydratase compare
Atu3510 -0.5 -1.3 amidohydrolase compare
Atu0124 -0.5 -1.9 hypothetical protein compare
Atu0319 -0.5 -0.6 ubiquinone biosynthesis protein compare
Atu3423 -0.5 -1.0 hypothetical protein compare
Atu0206 -0.5 -0.9 hypothetical protein compare
Atu0095 -0.5 -1.3 hypothetical protein compare
Atu8159 -0.5 -1.3 hypothetical protein compare
Atu3317 -0.5 -1.6 hypothetical protein compare
Atu4753 -0.5 -1.6 amino acid ABC transporter permease compare
Atu0795 -0.5 -0.9 hypothetical protein compare
Atu4072 -0.5 -0.6 nodulation protein N compare
Atu1417 -0.5 -2.8 enoyl-CoA hydratase compare
Atu2694 -0.5 -1.3 hypothetical protein compare
Atu2804 -0.5 -3.2 cobaltochelatase subunit compare
Atu3315 -0.5 -1.4 UDP-glucose 4-epimerase compare
Atu1141 -0.5 -2.0 Phosphoribosylglycinamide synthetase compare
Atu1759 -0.5 -3.0 L-serine dehydratase compare
Atu8132 -0.5 -2.6 hypothetical protein compare
Atu0490 -0.5 -2.4 hypothetical protein compare
Atu0298 -0.5 -2.2 orotidine 5 compare
Atu1607 -0.5 -1.6 DNA repair protein compare
Atu0662 -0.5 -2.1 transcriptional regulator, GntR family compare
Atu1570 -0.5 -0.6 hypothetical protein compare
Atu3505 -0.5 -2.7 3-hydroxyisobutyryl-CoA hydrolase compare
Atu0769 -0.5 -0.7 protoheme IX farnesyltransferase compare
Atu4176 -0.5 -3.2 hypothetical protein compare
Atu0583 -0.5 -2.3 hypothetical protein compare
Atu1818 -0.5 -1.2 hypothetical protein compare
Atu0050 -0.5 -1.5 two component response regulator compare
Atu0580 -0.5 -1.5 flagellar biosynthetic protein compare
Atu4609 -0.5 -2.8 glycosyltransferase compare
Atu3394 -0.5 -1.1 iron ABC transporter ATPase compare
Atu0846 -0.5 -1.1 transcriptional regulator, MarR family compare
Atu1028 -0.5 -0.8 hypothetical protein compare
Atu3413 -0.5 -1.3 AsnC family transcriptional regulator compare
Atu1891 -0.5 -1.3 cobalamin biosynthesis protein compare
Atu3265 -0.5 -1.7 hypothetical protein compare
Atu2722 -0.5 -2.2 porin compare
Atu2650 -0.5 -2.7 glycerol-3-phosphate dehydrogenase compare
Atu2193 -0.5 -0.5 hypothetical protein compare
Atu1921 -0.5 -1.8 hypothetical protein compare
Atu4583 -0.5 -2.5 superoxide dismutase compare


Specific Phenotypes

For 2 genes in this experiment

For stress Timentin in Agrobacterium fabrum C58

For stress Timentin across organisms