Experiment set24S531 for Agrobacterium fabrum C58

Compare to:

LB with Chloramphenicol 6.25 ug/mL

200 most important genes:

  gene name fitness t score description  
Atu2590 -5.0 -10.8 hypothetical protein compare
Atu2577 -4.8 -15.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu2591 -4.8 -9.2 glucosyltransferase compare
Atu2583 -4.6 -12.3 glycosyltransferase compare
Atu4148 -4.5 -6.1 UDP-glucuronic acid epimerase compare
Atu2592 -4.4 -6.7 hypothetical protein compare
Atu2582 -4.0 -8.6 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2585 -4.0 -6.0 hypothetical protein compare
Atu3203 -3.9 -7.9 RND multidrug efflux membrane permease conserved
Atu4149 -3.9 -12.9 UDP-glucose 6-dehydrogenase compare
Atu3202 -3.8 -17.2 RND multidrug efflux transporter conserved
Atu2584 -3.7 -5.8 hypothetical protein compare
Atu4738 -3.6 -8.6 chloramphenicol acetyltransferase compare
Atu1118 -3.1 -13.5 ABC transporter, nucleotide binding/ATPase protein conserved
Atu0030 -2.6 -2.2 phosphocarrier protein HPr compare
Atu3578 -2.6 -2.5 glycerol-3-phosphate dehydrogenase compare
Atu3613 -2.5 -4.9 hypothetical protein compare
Atu4317 -2.2 -2.8 TetR family transcriptional regulator compare
Atu1844 -2.1 -3.0 Phosphoribosylformylglycinamidine synthetase compare
Atu8180 -2.0 -9.4 hypothetical protein compare
Atu2554 -2.0 -2.3 lysyl-tRNA synthetase compare
Atu0331 -1.9 -2.4 sigma-54 modulation protein compare
Atu3727 -1.8 -4.0 hypothetical protein compare
Atu2831 -1.8 -2.9 glucose inhibited division protein A compare
Atu0050 -1.7 -4.0 two component response regulator compare
Atu1495 -1.7 -3.4 hypothetical protein compare
Atu2555 -1.7 -2.8 L-lysine 2,3-aminomutase compare
Atu3634 -1.6 -3.4 penicillin-binding protein dacf precursor compare
Atu1446 -1.6 -2.3 two component response regulator compare
Atu1030 -1.5 -1.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1110 -1.5 -2.0 cytosol aminopeptidase compare
Atu0353 -1.5 -6.1 acetyltransferase compare
Atu8167 -1.5 -6.5 putative transmembrane protein compare
Atu0399 -1.5 -4.2 dihydroorotase compare
Atu0361 -1.5 -1.7 transcriptional regulator compare
Atu4610 -1.4 -6.9 sugar nucleotide epimerase/dehydratase compare
Atu4217 -1.4 -0.9 TetR family transcriptional regulator compare
Atu1357 -1.4 -7.3 hypothetical protein compare
Atu0388 -1.4 -7.6 two component sensor kinase compare
Atu1356 -1.3 -5.7 hypothetical protein compare
Atu1570 -1.3 -1.4 hypothetical protein compare
Atu8087 -1.3 -1.1 putative peptidoglycan binding protein compare
Atu2692 -1.3 -3.2 intracellular septation protein compare
Atu2207 -1.2 -2.1 two component sensor kinase compare
Atu8094 -1.2 -3.2 hypothetical protein compare
Atu1759 -1.2 -6.5 L-serine dehydratase compare
Atu1149 -1.2 -1.9 adenylate cyclase compare
Atu3598 -1.2 -1.4 thiol:disulfide interchange protein compare
Atu6098 -1.1 -0.9 transcriptional regulator, HTH family compare
Atu1354 -1.1 -0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3469 -1.1 -1.9 phosphoglyceromutase compare
Atu1855 -1.1 -7.1 MFS permease compare
Atu0566 -1.1 -1.8 hypothetical protein compare
Atu0769 -1.1 -1.3 protoheme IX farnesyltransferase compare
Atu3697 -1.1 -2.1 ATP-dependent protease LA 2 compare
Atu1677 -1.1 -2.6 queuine tRNA-ribosyltransferase compare
Atu0149 -1.1 -3.2 enoyl-(acyl-carrier-protein) reductase compare
Atu2832 -1.1 -2.1 tRNA modification GTPase compare
Atu2803 -1.1 -3.0 Cobalamin biosynthesis associated protein compare
Atu2125 -1.1 -0.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu0677 -1.0 -1.6 hypothetical protein compare
Atu4108 -1.0 -5.1 ribonuclease D compare
Atu4418 -1.0 -2.5 glutaryl-CoA dehydrogenase compare
Atu2205 -1.0 -2.5 transcriptional regulator, MarR family compare
Atu0189 -1.0 -0.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0051 -1.0 -3.1 two component sensor kinase compare
Atu1028 -1.0 -1.5 hypothetical protein compare
Atu1163 -1.0 -0.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2073 -1.0 -2.7 membrane protein compare
Atu3468 -1.0 -0.9 hypothetical protein compare
Atu1838 -1.0 -1.2 ABC transporter, substrate binding protein (amino acid) compare
Atu0119 -1.0 -1.2 hypothetical protein compare
Atu0141 -1.0 -1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu2368 -1.0 -1.2 hypothetical protein compare
Atu3861 -0.9 -3.4 acyl-CoA hydrolase compare
Atu2335 -0.9 -1.2 hypothetical protein compare
Atu3739 -0.9 -2.7 phosphoglycerate kinase compare
Atu2716 -0.9 -6.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu1588 -0.9 -2.6 homoserine dehydrogenase compare
Atu1344 -0.9 -1.3 hypothetical protein compare
Atu0486 -0.9 -2.6 dihydroorotate dehydrogenase compare
Atu2640 -0.9 -1.5 hypothetical protein compare
Atu8138 -0.9 -1.2 hypothetical protein compare
Atu1589 -0.9 -2.8 aminotransferase, class I compare
Atu1891 -0.9 -1.8 cobalamin biosynthesis protein compare
Atu1182 -0.8 -1.6 hypothetical protein compare
Atu2495 -0.8 -3.4 flavoprotein oxidoreductase compare
Atu1327 -0.8 -2.9 NADH-ubiquinone oxidoreductase compare
Atu1449 -0.8 -3.4 potassium uptake protein compare
Atu1131 -0.8 -3.5 outer membrane protein compare
Atu3579 -0.8 -2.7 lactoylglutathione lyase compare
Atu4669 -0.8 -3.7 hypothetical protein compare
Atu1644 -0.8 -1.5 hypothetical protein compare
Atu1647 -0.8 -2.9 ABC transporter, membrane spanning protein compare
Atu0533 -0.8 -2.2 putative inhibitor of septum formation compare
Atu1359 -0.8 -0.7 dnaK deletion suppressor protein compare
Atu0142 -0.8 -2.2 cytochrome o ubiquinol oxidase subunit II compare
Atu2432 -0.8 -1.2 hypothetical protein compare
Atu0269 -0.8 -2.4 exodeoxyribonuclease VII large subunit compare
Atu0017 -0.8 -2.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1904 -0.8 -1.6 transcriptional regulator compare
Atu3423 -0.8 -1.4 hypothetical protein compare
Atu2489 -0.8 -3.7 hypothetical protein compare
Atu1581 -0.7 -1.1 hypothetical protein compare
Atu2349 -0.7 -1.3 hypothetical protein compare
Atu3486 -0.7 -1.7 DeoR family transcriptional regulator compare
Atu0344 -0.7 -1.6 hypothetical protein compare
Atu0228 -0.7 -2.2 hypothetical protein compare
Atu2428 -0.7 -3.8 exopolysaccharide production protein PssB compare
Atu8052 -0.7 -1.5 hypothetical protein compare
Atu1737 -0.7 -1.4 hypothetical protein compare
Atu0837 -0.7 -3.4 transcriptional regulator, MarR family compare
Atu1232 -0.7 -1.5 hypothetical protein compare
Atu2083 -0.7 -1.5 DNA repair protein RecN compare
Atu8147 -0.7 -4.7 hypothetical protein compare
Atu2710 -0.7 -1.3 hypothetical protein compare
Atu4346 -0.7 -3.4 hypothetical protein compare
Atu1874 -0.7 -1.3 RecA protein compare
Atu0602 -0.7 -3.4 glutamine synthetase compare
Atu1360 -0.7 -4.6 hypothetical protein compare
Atu1455 -0.7 -2.3 hypothetical protein compare
Atu3798 -0.7 -2.7 TetR family transcriptional regulator compare
Atu4112 -0.7 -3.8 proline dipeptidase compare
Atu3754 -0.7 -1.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1077 -0.7 -1.7 DNA repair protein compare
Atu1447 -0.6 -0.8 two component sensor kinase compare
Atu0978 -0.6 -1.8 two component response regulator compare
Atu2036 -0.6 -0.6 acetolactate synthase III, large subunit compare
Atu2766 -0.6 -5.4 NAD-glutamate dehydrogenase compare
Atu3779 -0.6 -3.9 lytic murein transglycosylase compare
Atu1620 -0.6 -3.8 triosephosphate isomerase compare
Atu1503 -0.6 -0.8 hypothetical protein compare
Atu0368 -0.6 -2.0 tRNA pseudouridine synthase I compare
Atu0499 -0.6 -3.6 hypothetical protein compare
Atu2722 -0.6 -2.6 porin compare
Atu1689 -0.6 -2.6 molybdenum cofactor biosynthesis protein C compare
Atu2551 -0.6 -4.7 RND multidrug efflux transporter compare
Atu0535 -0.6 -1.9 hypothetical protein compare
Atu3515 -0.6 -1.9 hypothetical protein compare
Atu1542 -0.6 -2.6 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2801 -0.6 -1.8 precorrin-2 C20 methyltransferase compare
Atu5470 -0.6 -1.0 hypothetical protein compare
Atu8012 -0.6 -0.8 hypothetical protein compare
Atu5125 -0.6 -1.6 GntR family transcriptional regulator compare
Atu2662 -0.6 -0.8 acetyltransferase compare
Atu3073 -0.6 -2.8 aspartate racemase compare
Atu2682 -0.6 -2.2 hypothetical protein compare
Atu4677 -0.6 -1.0 hypothetical protein compare
Atu1515 -0.6 -2.2 hypothetical protein compare
Atu2804 -0.6 -3.7 cobaltochelatase subunit compare
Atu1140 -0.6 -2.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu4837 -0.6 -1.6 hypothetical protein compare
Atu5451 -0.6 -0.8 hypothetical protein compare
Atu3183 -0.6 -0.7 hypothetical protein compare
Atu3730 -0.6 -0.6 hypothetical protein compare
Atu1204 -0.6 -2.0 potassium uptake protein compare
Atu8168 -0.6 -1.6 hypothetical protein compare
Atu4173 -0.6 -1.3 phosphoenolpyruvate-protein phosphotransferase compare
Atu4115 -0.6 -3.0 dipeptide ABC transporter permease compare
Atu0883 -0.6 -2.4 hypothetical protein compare
Atu8161 -0.6 -1.1 hypothetical protein compare
Atu3884 -0.6 -3.3 hypothetical protein compare
Atu0510 -0.5 -3.1 pH adaption potassium efflux system protein compare
Atu1645 -0.5 -2.2 ABC transporter, substrate binding protein compare
Atu0135 -0.5 -1.1 uracil phosphoribosyltransferase compare
Atu1075 -0.5 -2.8 amidophosphoribosyltransferase compare
Atu0795 -0.5 -0.8 hypothetical protein compare
Atu2615 -0.5 -0.4 hypothetical protein compare
Atu2113 -0.5 -1.1 N-acetylmuramoyl-L-alanine amidase compare
Atu2017 -0.5 -0.7 hypothetical protein compare
Atu2259 -0.5 -2.5 MFS permease compare
Atu8162 -0.5 -0.8 hypothetical protein compare
Atu3396 -0.5 -3.1 ABC transporter substrate-binding protein compare
Atu4526 -0.5 -2.6 ABC transporter permease compare
Atu1692 -0.5 -1.8 hypothetical protein compare
Atu3750 -0.5 -1.3 thiamine-phosphate pyrophosphorylase compare
Atu3608 -0.5 -1.9 hypothetical protein compare
Atu0298 -0.5 -2.4 orotidine 5 compare
Atu0479 -0.5 -2.6 ABC transporter, substrate binding protein (amino acid) compare
Atu0319 -0.5 -0.7 ubiquinone biosynthesis protein compare
Atu1683 -0.5 -0.6 hypothetical protein compare
Atu3075 -0.5 -2.1 TetR family transcriptional regulator compare
Atu3509 -0.5 -1.3 hypothetical protein compare
Atu8041 -0.5 -1.7 hypothetical protein compare
Atu5427 -0.5 -1.6 hypothetical protein compare
Atu1468 -0.5 -2.7 hypothetical protein compare
Atu3712 -0.5 -0.6 hypothetical protein compare
Atu4522 -0.5 -2.9 hypothetical protein compare
Atu3604 -0.5 -1.8 hypoxanthine phosphoribosyltransferase compare
Atu3582 -0.5 -2.4 hypothetical protein compare
Atu2657 -0.5 -1.5 hypothetical protein compare
Atu1100 -0.5 -2.6 hypothetical protein compare
Atu0788 -0.5 -1.6 hypothetical protein compare
Atu2239 -0.5 -1.4 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4143 -0.5 -1.0 hypothetical protein compare
Atu1793 -0.5 -2.9 phosphatidylcholine synthase compare
Atu0979 -0.5 -2.1 two component sensor kinase compare
Atu3718 -0.5 -2.5 hypothetical protein compare
Atu1646 -0.5 -1.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu0687 -0.5 -1.2 hypothetical protein compare


Specific Phenotypes

For 12 genes in this experiment

For stress Chloramphenicol in Agrobacterium fabrum C58

For stress Chloramphenicol across organisms