Experiment set24S530 for Agrobacterium fabrum C58

Compare to:

LB with Chloramphenicol 6.25 ug/mL

200 most important genes:

  gene name fitness t score description  
Atu2590 -4.8 -12.0 hypothetical protein compare
Atu2582 -4.7 -8.5 UDP-glucose/GDP-mannose dehydrogenase compare
Atu4148 -4.6 -5.5 UDP-glucuronic acid epimerase compare
Atu4149 -4.6 -13.2 UDP-glucose 6-dehydrogenase compare
Atu2583 -4.6 -12.5 glycosyltransferase compare
Atu2585 -4.5 -4.3 hypothetical protein compare
Atu2577 -4.3 -17.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu2591 -4.3 -9.8 glucosyltransferase compare
Atu2592 -4.0 -8.1 hypothetical protein compare
Atu2584 -4.0 -5.4 hypothetical protein compare
Atu3202 -3.6 -16.6 RND multidrug efflux transporter conserved
Atu4738 -3.4 -8.3 chloramphenicol acetyltransferase compare
Atu0141 -3.3 -2.2 cytochrome O ubiquinol oxidase subunit I compare
Atu3203 -3.2 -8.4 RND multidrug efflux membrane permease conserved
Atu3727 -3.2 -3.6 hypothetical protein compare
Atu3613 -3.0 -4.8 hypothetical protein compare
Atu3730 -2.6 -1.7 hypothetical protein compare
Atu3634 -2.4 -5.0 penicillin-binding protein dacf precursor compare
Atu1118 -2.3 -11.8 ABC transporter, nucleotide binding/ATPase protein conserved
Atu1028 -2.2 -1.6 hypothetical protein compare
Atu0331 -2.2 -2.5 sigma-54 modulation protein compare
Atu3469 -2.1 -2.8 phosphoglyceromutase compare
Atu3598 -2.1 -1.9 thiol:disulfide interchange protein compare
Atu1446 -2.0 -2.5 two component response regulator compare
Atu1359 -2.0 -1.3 dnaK deletion suppressor protein compare
Atu8180 -1.9 -7.3 hypothetical protein compare
Atu0769 -1.8 -2.0 protoheme IX farnesyltransferase compare
Atu8025 -1.7 -2.2 hypothetical protein compare
Atu8052 -1.7 -1.8 hypothetical protein compare
Atu1149 -1.6 -2.2 adenylate cyclase compare
Atu1495 -1.6 -3.3 hypothetical protein compare
Atu0795 -1.6 -2.4 hypothetical protein compare
Atu3739 -1.6 -2.9 phosphoglycerate kinase compare
Atu1030 -1.6 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3008 -1.5 -1.3 hypothetical protein compare
Atu0368 -1.5 -3.5 tRNA pseudouridine synthase I compare
Atu2692 -1.5 -3.3 intracellular septation protein compare
Atu3183 -1.5 -1.4 hypothetical protein compare
Atu4217 -1.4 -0.9 TetR family transcriptional regulator compare
Atu1588 -1.4 -3.3 homoserine dehydrogenase compare
Atu1356 -1.4 -6.5 hypothetical protein compare
Atu0399 -1.4 -4.1 dihydroorotase compare
Atu0353 -1.4 -5.6 acetyltransferase compare
Atu2207 -1.4 -2.6 two component sensor kinase compare
Atu3009 -1.4 -1.5 exopolysaccharide production protein compare
Atu2073 -1.4 -3.9 membrane protein compare
Atu1357 -1.4 -8.4 hypothetical protein compare
Atu3001 -1.3 -1.7 hypothetical protein compare
Atu3757 -1.3 -2.8 hypothetical protein compare
Atu1589 -1.2 -3.6 aminotransferase, class I compare
Atu3663 -1.2 -1.5 hypothetical protein compare
Atu3578 -1.2 -2.1 glycerol-3-phosphate dehydrogenase compare
Atu3160 -1.2 -2.6 hypothetical protein compare
Atu1131 -1.2 -5.6 outer membrane protein compare
Atu4610 -1.2 -5.8 sugar nucleotide epimerase/dehydratase compare
Atu0190 -1.2 -1.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2554 -1.2 -1.8 lysyl-tRNA synthetase compare
Atu8167 -1.2 -5.6 putative transmembrane protein compare
Atu8056 -1.2 -1.4 hypothetical protein compare
Atu0051 -1.1 -3.3 two component sensor kinase compare
Atu2125 -1.1 -1.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu1339 -1.1 -2.7 ribonuclease E compare
Atu0050 -1.1 -3.1 two component response regulator compare
Atu0344 -1.1 -2.1 hypothetical protein compare
Atu6165 -1.0 -1.5 hypothetical protein compare
Atu3014 -1.0 -2.0 hypothetical protein compare
Atu0142 -1.0 -2.4 cytochrome o ubiquinol oxidase subunit II compare
Atu0298 -1.0 -4.5 orotidine 5 compare
Atu4317 -1.0 -1.7 TetR family transcriptional regulator compare
Atu4677 -1.0 -1.5 hypothetical protein compare
Atu0189 -1.0 -0.9 ABC transporter, membrane spanning protein (peptide) compare
Atu1204 -1.0 -3.2 potassium uptake protein compare
Atu1364 -1.0 -3.0 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1759 -1.0 -5.0 L-serine dehydratase compare
Atu1685 -1.0 -0.9 hypothetical protein compare
Atu2710 -1.0 -1.6 hypothetical protein compare
Atu0149 -1.0 -3.0 enoyl-(acyl-carrier-protein) reductase compare
Atu4669 -1.0 -5.2 hypothetical protein compare
Atu2040 -1.0 -2.7 phosphoserine phosphatase compare
Atu1449 -1.0 -3.9 potassium uptake protein compare
Atu3697 -0.9 -2.3 ATP-dependent protease LA 2 compare
Atu2832 -0.9 -1.8 tRNA modification GTPase compare
Atu2205 -0.9 -1.8 transcriptional regulator, MarR family compare
Atu0602 -0.9 -4.6 glutamine synthetase compare
Atu1683 -0.9 -0.9 hypothetical protein compare
Atu1889 -0.9 -1.5 diacylglycerol kinase compare
Atu4108 -0.9 -4.3 ribonuclease D compare
Atu1891 -0.9 -1.8 cobalamin biosynthesis protein compare
Atu1677 -0.9 -2.3 queuine tRNA-ribosyltransferase compare
Atu2555 -0.9 -1.7 L-lysine 2,3-aminomutase compare
Atu4187 -0.9 -1.0 tRNA-Met compare
Atu1542 -0.9 -3.1 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0755 -0.8 -2.2 hypothetical protein compare
Atu2716 -0.8 -5.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu8087 -0.8 -0.9 putative peptidoglycan binding protein compare
Atu8094 -0.8 -2.6 hypothetical protein compare
Atu4641 -0.8 -2.3 LysR family transcriptional regulator compare
Atu4711 -0.8 -2.6 two component sensor kinase compare
Atu0184 -0.8 -2.3 glucokinase compare
Atu1847 -0.8 -1.7 hypothetical protein compare
Atu0346 -0.8 -1.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu8191 -0.8 -1.5 hypothetical protein compare
Atu0043 -0.8 -1.4 imidazoleglycerol-phosphate dehydratase compare
Atu3835 -0.8 -2.3 hypothetical protein compare
Atu4173 -0.8 -1.8 phosphoenolpyruvate-protein phosphotransferase compare
Atu4779 -0.8 -2.1 hypothetical protein compare
Atu1620 -0.8 -4.1 triosephosphate isomerase compare
Atu0895 -0.8 -0.8 ABC transporter, substrate binding protein compare
Atu1327 -0.8 -2.3 NADH-ubiquinone oxidoreductase compare
Atu0388 -0.8 -4.8 two component sensor kinase compare
Atu1855 -0.8 -4.0 MFS permease compare
Atu1838 -0.8 -1.0 ABC transporter, substrate binding protein (amino acid) compare
Atu0535 -0.8 -2.4 hypothetical protein compare
Atu1989 -0.8 -3.2 two component response regulator compare
Atu3461 -0.7 -1.5 GntR family transcriptional regulator compare
Atu1645 -0.7 -2.9 ABC transporter, substrate binding protein compare
Atu1844 -0.7 -1.3 Phosphoribosylformylglycinamidine synthetase compare
Atu2722 -0.7 -3.1 porin compare
Atu2640 -0.7 -1.3 hypothetical protein compare
Atu2217 -0.7 -2.7 hypothetical protein compare
Atu1904 -0.7 -1.8 transcriptional regulator compare
Atu1836 -0.7 -1.2 hypothetical protein compare
Atu1781 -0.7 -3.2 hypothetical protein compare
Atu2036 -0.7 -0.5 acetolactate synthase III, large subunit compare
Atu3121 -0.7 -0.6 cold shock protein compare
Atu3754 -0.7 -2.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1127 -0.7 -1.7 molybdopterin converting factor small subunit compare
Atu1515 -0.7 -2.5 hypothetical protein compare
Atu1647 -0.7 -3.1 ABC transporter, membrane spanning protein compare
Atu1606 -0.7 -2.4 methionine aminopeptidase compare
Atu3798 -0.7 -3.3 TetR family transcriptional regulator compare
Atu0486 -0.7 -2.3 dihydroorotate dehydrogenase compare
Atu1679 -0.7 -1.6 peptidyl prolyl cis-trans isomerase compare
Atu2495 -0.7 -2.8 flavoprotein oxidoreductase compare
Atu6098 -0.7 -0.6 transcriptional regulator, HTH family compare
Atu1517 -0.7 -2.4 hypothetical protein compare
Atu1725 -0.7 -1.9 hypothetical protein compare
Atu2489 -0.6 -3.7 hypothetical protein compare
Atu2766 -0.6 -5.6 NAD-glutamate dehydrogenase compare
Atu2343 -0.6 -3.3 acetyltransferase compare
Atu3567 -0.6 -2.6 hypothetical protein compare
Atu1646 -0.6 -1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu1075 -0.6 -2.9 amidophosphoribosyltransferase compare
Atu4522 -0.6 -4.1 hypothetical protein compare
Atu1874 -0.6 -1.2 RecA protein compare
Atu0413 -0.6 -1.1 stress induced protein compare
Atu3120 -0.6 -1.0 hypothetical protein compare
Atu1694 -0.6 -1.0 hypothetical protein compare
Atu2662 -0.6 -0.7 acetyltransferase compare
Atu2793 -0.6 -2.1 cobyrinic acid a,c-diamide synthase compare
Atu1527 -0.6 -1.9 nitrogen fixation protein FixS compare
Atu2831 -0.6 -1.3 glucose inhibited division protein A compare
Atu3075 -0.6 -3.0 TetR family transcriptional regulator compare
Atu3780 -0.6 -2.2 hypothetical protein compare
Atu1667 -0.6 -1.0 hypothetical protein compare
Atu2428 -0.6 -3.2 exopolysaccharide production protein PssB compare
Atu1154 -0.6 -1.7 hypothetical protein compare
Atu1644 -0.6 -1.1 hypothetical protein compare
Atu1182 -0.6 -1.2 hypothetical protein compare
Atu0886 -0.6 -0.8 hypothetical protein compare
Atu1754 -0.6 -1.2 hypothetical protein compare
Atu8018 -0.6 -0.7 hypothetical protein compare
Atu2394 -0.6 -2.5 Regulator of Biofilm formation, Fnr Family compare
Atu4237 -0.6 -2.0 hypothetical protein compare
Atu2452 -0.6 -1.8 hypothetical protein compare
Atu1468 -0.6 -3.6 hypothetical protein compare
Atu0272 -0.6 -2.4 transcriptional regulator, MarR family compare
Atu8203 -0.6 -1.9 hypothetical protein compare
Atu8032 -0.6 -1.4 hypothetical protein compare
Atu0845 -0.6 -1.9 hypothetical protein compare
Atu3396 -0.6 -3.2 ABC transporter substrate-binding protein compare
Atu1163 -0.6 -0.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4006 -0.5 -2.0 AsnC family transcriptional regulator compare
Atu1793 -0.5 -3.1 phosphatidylcholine synthase compare
Atu1971 -0.5 -1.9 hypothetical protein compare
Atu1249 -0.5 -2.1 hypothetical protein compare
Atu2550 -0.5 -4.1 RND multidrug efflux membrane permease compare
Atu4041 -0.5 -2.3 ribosomal large subunit pseudouridine synthase A compare
Atu2789 -0.5 -1.1 hypothetical protein compare
Atu0784 -0.5 -1.5 hypothetical protein compare
Atu3777 -0.5 -2.9 hypothetical protein compare
Atu3718 -0.5 -2.5 hypothetical protein compare
Atu1205 -0.5 -3.2 threonine dehydratase compare
Atu8133 -0.5 -2.2 hypothetical protein compare
Atu5415 -0.5 -3.4 hypothetical protein compare
Atu0759 -0.5 -3.1 hypothetical protein compare
Atu0513 -0.5 -2.7 hypothetical protein compare
Atu0499 -0.5 -3.0 hypothetical protein compare
Atu3476 -0.5 -1.5 AsnC family transcriptional regulator compare
Atu0723 -0.5 -0.3 FAD dependent oxidoreductase compare
Atu2808 -0.5 -2.7 cobyric acid synthase compare
Atu3750 -0.5 -1.3 thiamine-phosphate pyrophosphorylase compare
Atu1300 -0.5 -2.6 MFS permease compare
Atu2804 -0.5 -3.1 cobaltochelatase subunit compare
Atu1619 -0.5 -1.0 protein-export membrane protein SECG compare
Atu0979 -0.5 -2.1 two component sensor kinase compare
Atu1140 -0.5 -2.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2052 -0.5 -0.7 hypothetical protein compare
Atu4666 -0.5 -2.3 HlyD family secretion protein compare
Atu8176 -0.5 -1.2 hypothetical protein compare


Specific Phenotypes

For 10 genes in this experiment

For stress Chloramphenicol in Agrobacterium fabrum C58

For stress Chloramphenicol across organisms