Experiment set24S530 for Agrobacterium fabrum C58

Compare to:

LB with Chloramphenicol 6.25 ug/mL

200 most detrimental genes:

  gene name fitness t score description  
Atu3201 +2.7 17.9 TetR family transcriptional regulator conserved
Atu0340 +1.8 4.9 SAM dependent methyltransferase conserved
Atu4773 +1.5 2.3 two component response regulator compare
Atu0986 +1.4 2.0 hypothetical protein compare
Atu1810 +1.3 0.8 hypothetical protein compare
Atu0777 +1.2 1.3 hypothetical protein compare
Atu8088 +1.2 2.4 hypothetical protein compare
Atu2787 +1.1 1.4 hypothetical protein compare
Atu0115 +1.1 1.6 hypothetical protein compare
Atu2673 +1.0 7.6 hypothetical protein compare
Atu0953 +1.0 1.4 hypothetical protein compare
Atu4616 +1.0 1.3 dTDP-4-dehydrorhamnose reductase compare
Atu0809 +1.0 2.1 hypothetical protein compare
Atu1629 +0.9 1.6 transcriptional regulator, ArsR family compare
Atu3712 +0.8 1.2 hypothetical protein compare
Atu0941 +0.8 1.1 hypothetical protein compare
Atu1466 +0.8 1.6 hypothetical protein compare
Atu2579 +0.8 5.3 metal dependant beta lactamase protein compare
Atu3795 +0.8 6.5 AcrB/AcrD/AcrF family protein compare
Atu0976 +0.7 1.7 cycL protein compare
Atu1225 +0.7 1.2 hypothetical protein compare
Atu0201 +0.7 1.6 hypothetical protein compare
Atu3794 +0.7 4.7 FadR family transcriptional regulator compare
Atu4072 +0.7 1.0 nodulation protein N compare
Atu4884 +0.7 2.6 hypothetical protein compare
Atu2192 +0.7 1.1 hypothetical protein compare
Atu3609 +0.7 2.6 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu2578 +0.7 3.7 cAMP-dependent protein kinase regulatory subunit compare
Atu4166 +0.7 1.9 UDP-glucose 4-epimerase compare
Atu1326 +0.7 3.3 acetyltransferase compare
Atu3182 +0.6 2.2 hypothetical protein compare
Atu4896 +0.6 1.1 acetyltransferase compare
Atu0947 +0.6 1.9 transcriptional regulator, AsnC family compare
Atu3797 +0.6 4.8 HlyD family secretion protein compare
Atu5164 +0.6 1.0 type IV secretion protein AvhB3 compare
Atu2634 +0.6 1.6 hypothetical protein compare
Atu3353 +0.6 4.6 mannose-1-phosphate guanylyltransferase compare
Atu3796 +0.6 4.4 efflux protein compare
Atu4144 +0.6 1.0 hypothetical protein compare
Atu1525 +0.6 2.0 hypothetical protein compare
Atu0041 +0.6 1.0 glutamine amidotransferase compare
Atu3517 +0.6 2.7 acetyltransferase compare
Atu8151 +0.6 1.5 hypothetical protein compare
Atu3012 +0.6 1.1 hypothetical protein compare
Atu1701 +0.6 1.4 protein-L-isoaspartate O-methyltransferase compare
Atu2720 +0.6 4.0 monofunctional biosynthesis peptidoglycan transglycosylase compare
Atu0995 +0.6 3.3 hypothetical protein compare
Atu4618 +0.6 3.7 dTDP-rhamnose-3,5-epimerase compare
Atu0925 +0.6 1.6 hypothetical protein compare
Atu1219 +0.6 0.7 hypothetical protein compare
Atu1254 +0.5 1.3 transcriptional regulator, ArsR family compare
Atu1601 +0.5 4.1 oxygen-independent coproporphyrinogen III oxidase compare
Atu3299 +0.5 1.7 hypothetical protein compare
Atu0339 +0.5 1.7 hypothetical protein compare
Atu2478 +0.5 2.4 hypothetical protein compare
Atu4614 +0.5 3.1 glycosyltransferase compare
Atu0540 +0.5 1.5 hypothetical protein compare
Atu5145 +0.5 1.6 acetyltransferase compare
Atu3095 +0.5 1.5 hypothetical protein compare
Atu3311 +0.5 4.3 phosphomannose isomerase compare
Atu1777 +0.5 1.4 hypothetical protein compare
Atu2790 +0.5 1.5 3-isopropylmalate dehydratase, small subunit compare
Atu0999 +0.5 2.3 magnesium transport protein compare
Atu2433 +0.5 1.0 hypothetical protein compare
Atu2201 +0.5 1.4 hydrolase compare
Atu5160 +0.5 1.5 transcriptional regulator protein compare
Atu3324 +0.5 1.5 hypothetical protein compare
Atu2232 +0.5 2.1 ATP-dependent Clp protease adaptor protein ClpS compare
Atu2063 +0.5 0.9 hypothetical protein compare
Atu1739 +0.5 1.5 permease compare
Atu1333 +0.5 1.6 outer membrane protein compare
Atu0939 +0.5 1.8 PemI protein compare
Atu1634 +0.5 0.9 hypothetical protein compare
Atu1906 +0.5 2.7 ABC transporter, membrane spanning protein compare
Atu2439 +0.5 0.4 hypothetical protein compare
Atu3521 +0.5 1.7 permease compare
Atu1744 +0.5 2.4 nitroreductase family protein compare
Atu2293 +0.5 1.1 hypothetical protein compare
Atu5481 +0.5 2.6 ABC transporter membrane spanning protein compare
Atu3105 +0.5 2.2 hypothetical protein compare
Atu3506 +0.5 1.6 hypothetical protein compare
Atu0551 +0.5 1.0 flagellar protein FLGA precursor compare
Atu1726 +0.5 2.3 hypothetical protein compare
Atu0049 +0.5 1.4 hypothetical protein compare
Atu0031 +0.5 0.5 PTS system, IIA component compare
Atu5475 +0.5 1.5 hypothetical protein compare
Atu0492 +0.5 2.3 hypothetical protein compare
Atu3619 +0.5 1.3 hypothetical protein compare
Atu5088 +0.4 1.1 hypothetical protein compare
Atu3085 +0.4 2.1 hydantoin racemase compare
Atu0725 +0.4 2.1 hypothetical protein compare
Atu3679 +0.4 2.4 siderophore biosynthesis protein compare
Atu0566 +0.4 1.1 hypothetical protein compare
Atu4527 +0.4 0.7 hypothetical protein compare
Atu5121 +0.4 3.1 two component response regulator compare
Atu3465 +0.4 1.4 metallo-beta-lactamase superfamily protein compare
Atu0070 +0.4 2.5 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu0948 +0.4 1.8 hypothetical protein compare
Atu4095 +0.4 1.1 hypothetical protein compare
Atu1077 +0.4 1.2 DNA repair protein compare
Atu4499 +0.4 2.1 hypothetical protein compare
Atu0009 +0.4 2.9 membrane-bound lytic murein transglycosylase compare
Atu1801 +0.4 1.5 hypothetical protein compare
Atu2456 +0.4 1.8 lactoylglutathione lyase compare
Atu2077 +0.4 1.1 DNA polymerase III, epsilon subunit compare
Atu3523 +0.4 2.4 polysaccharide biosynthesis-like protein compare
Atu4435 +0.4 1.6 oligopeptide ABC transporter ATPase compare
Atu5010 +0.4 1.5 hypothetical protein compare
Atu5119 +0.4 3.3 two component response regulator compare
Atu4737 +0.4 1.3 hypothetical protein compare
Atu1994 +0.4 2.0 acyl-CoA hydrolase compare
Atu4050 +0.4 1.7 UTP-glucose-1-phosphate uridylyltransferase compare
Atu4864 +0.4 2.2 MarR family transcriptional regulator compare
Atu8035 +0.4 1.0 hypothetical protein compare
Atu5161 +0.4 2.4 hypothetical protein compare
Atu0973 +0.4 2.2 cycH protein compare
Atu2588 +0.4 2.5 ABC transporter, membrane spanning protein (oligopeptide) compare
Atu4328 +0.4 1.9 hypothetical protein compare
Atu0276 +0.4 1.0 hypothetical protein compare
Atu1993 +0.4 2.3 tRNA/rRNA metyltransferase compare
Atu2574 +0.4 2.4 hypothetical protein compare
Atu3653 +0.4 1.7 hypothetical protein compare
Atu3647 +0.4 1.3 hypothetical protein compare
Atu5130 +0.4 1.9 attachment protein compare
Atu0585 +0.4 1.1 hypothetical protein compare
Atu0996 +0.4 2.1 zinc-binding dehydrogenase compare
Atu4197 +0.4 2.7 hypothetical protein compare
Atu5467 +0.4 1.3 hypothetical protein compare
Atu0824 +0.4 0.6 hypothetical protein compare
Atu3834 +0.4 1.6 hypothetical protein compare
Atu2676 +0.4 2.0 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu4557 +0.4 2.1 sugar ABC transporter permease compare
Atu5007 +0.4 2.0 santhopine-responsive transcriptional repressor compare
Atu8036 +0.4 1.5 protein YBGT-like protein compare
Atu1559 +0.4 1.0 hypothetical protein compare
Atu3667 +0.4 1.5 aspartate alpha-decarboxylase compare
Atu2768 +0.4 2.0 hypothetical protein compare
Atu0410 +0.4 2.4 transcriptional regulator, AraC family compare
Atu4176 +0.4 1.7 hypothetical protein compare
Atu0135 +0.4 1.0 uracil phosphoribosyltransferase compare
Atu1760 +0.4 0.5 hypothetical protein compare
Atu0907 +0.4 0.9 Phosphinothricin acetyltransferase compare
Atu1444 +0.4 2.1 nitrogen regulation protein compare
Atu2187 +0.4 1.3 transcriptional regulator, ArsR family compare
Atu0237 +0.4 1.4 hypothetical protein compare
Atu1705 +0.4 2.1 SEC-independent protein translocase protein compare
Atu5196 +0.4 1.9 hypothetical protein compare
Atu1566 +0.4 0.5 hypothetical protein compare
Atu3018 +0.4 1.6 hypothetical protein compare
Atu3614 +0.4 2.6 glyoxalase II compare
Atu4371 +0.4 2.2 sugar ABC transporter permease compare
Atu0890 +0.4 1.9 hypothetical protein compare
Atu4083 +0.4 2.0 aldose epimerase compare
Atu2051 +0.3 1.6 hypothetical protein compare
Atu0421 +0.3 0.6 ABC transporter, membrane spanning protein compare
Atu0169 +0.3 2.2 hypothetical protein compare
Atu1779 +0.3 0.9 hypothetical protein compare
Atu0932 +0.3 1.9 hypothetical protein compare
Atu4615 +0.3 2.4 glucose-1-phosphate thymidylyltransferase compare
Atu1206 +0.3 2.3 hypothetical protein compare
Atu0520 +0.3 1.4 chemotaxis receiver protein compare
Atu5513 +0.3 1.0 cold shock protein compare
Atu4745 +0.3 1.8 sugar ABC transporter ATPase compare
Atu8047 +0.3 1.0 hypothetical protein compare
Atu5480 +0.3 1.8 ABC transporter nucleotide binding/ATPase compare
Atu4617 +0.3 2.5 dTDP-D-glucose-4,6-dehydratase compare
Atu3566 +0.3 1.4 hypothetical protein compare
Atu2056 +0.3 1.5 hypothetical protein compare
Atu2825 +0.3 2.2 Sun protein compare
Atu3873 +0.3 1.8 hypothetical protein compare
Atu0093 +0.3 1.4 Recombination protein compare
Atu1008 +0.3 1.7 hypothetical protein compare
Atu2135 +0.3 1.2 transcriptional regulator, TetR family compare
Atu3482 +0.3 1.7 pantoate--beta-alanine ligase compare
Atu0545 +0.3 1.8 flagella associated protein compare
Atu5129 +0.3 2.5 ABC transporter substrate binding protein (mannopine) compare
Atu2737 +0.3 1.7 oxidoredutase compare
Atu3294 +0.3 1.3 GntR family transcriptional regulator compare
Atu8096 +0.3 0.7 hypothetical protein compare
Atu5171 +0.3 2.2 type IV secretion protein AvhB10 compare
Atu1581 +0.3 0.6 hypothetical protein compare
Atu4541 +0.3 1.3 carboxymuconolactone decarboxylase compare
Atu5158 +0.3 1.5 hypothetical protein compare
Atu3204 +0.3 2.2 diguanylate cyclase compare
Atu4484 +0.3 2.2 hypothetical protein compare
Atu4393 +0.3 1.8 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
Atu2491 +0.3 0.9 hypothetical protein compare
Atu1050 +0.3 2.2 hypothetical protein compare
Atu5428 +0.3 2.4 DNA-damage-inducible protein F compare
Atu2331 +0.3 1.5 hypothetical protein compare
Atu5498 +0.3 2.1 oxidoreductase with iron-sulfur subunit compare
Atu1483 +0.3 1.6 cytochrome b561 compare
Atu1852 +0.3 1.8 hypothetical protein compare
Atu5108 +0.3 1.8 conjugal transfer coupling protein TraG compare
Atu2074 +0.3 1.4 hypothetical protein compare
Atu1656 +0.3 2.0 tolB protein compare
Atu3776 +0.3 1.3 hypothetical protein compare
Atu4189 +0.3 1.8 dihydropicolinate synthase compare
Atu1863 +0.3 1.6 permease compare
Atu4223 +0.3 0.8 sarcosine oxidase delta subunit compare


Specific Phenotypes

For 10 genes in this experiment

For stress Chloramphenicol in Agrobacterium fabrum C58

For stress Chloramphenicol across organisms