Experiment set24S529 for Agrobacterium fabrum C58

Compare to:

LB with Hygromycin B 25 ug/mL

200 most important genes:

  gene name fitness t score description  
Atu2584 -5.6 -5.4 hypothetical protein compare
Atu2583 -4.2 -14.3 glycosyltransferase compare
Atu4149 -3.8 -13.1 UDP-glucose 6-dehydrogenase compare
Atu2592 -3.8 -8.0 hypothetical protein compare
Atu2585 -3.8 -6.2 hypothetical protein compare
Atu2590 -3.6 -13.0 hypothetical protein compare
Atu2582 -3.5 -9.9 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2591 -3.3 -9.6 glucosyltransferase compare
Atu4148 -3.3 -8.0 UDP-glucuronic acid epimerase compare
Atu2577 -3.1 -18.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu4610 -2.7 -10.0 sugar nucleotide epimerase/dehydratase compare
Atu0995 -2.5 -8.6 hypothetical protein compare
Atu2207 -2.4 -3.6 two component sensor kinase compare
Atu2682 -2.4 -4.5 hypothetical protein compare
Atu0769 -2.3 -2.1 protoheme IX farnesyltransferase compare
Atu8167 -2.2 -8.0 putative transmembrane protein compare
Atu1021 -2.1 -3.2 outer membrane protein compare
Atu8056 -2.1 -2.0 hypothetical protein compare
Atu0086 -2.0 -1.3 ribosome-binding factor A compare
Atu2113 -1.9 -4.2 N-acetylmuramoyl-L-alanine amidase compare
Atu1131 -1.9 -7.2 outer membrane protein compare
Atu3730 -1.9 -1.6 hypothetical protein compare
Atu2832 -1.8 -2.7 tRNA modification GTPase compare
Atu2692 -1.8 -3.6 intracellular septation protein compare
Atu1163 -1.8 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0142 -1.8 -3.7 cytochrome o ubiquinol oxidase subunit II compare
Atu2831 -1.7 -2.7 glucose inhibited division protein A compare
Atu1677 -1.7 -3.4 queuine tRNA-ribosyltransferase compare
Atu1753 -1.7 -8.9 hypothetical protein compare
Atu1077 -1.7 -3.3 DNA repair protein compare
Atu2722 -1.7 -6.5 porin compare
Atu1495 -1.7 -3.3 hypothetical protein compare
Atu1204 -1.6 -4.8 potassium uptake protein compare
Atu1760 -1.6 -1.4 hypothetical protein compare
Atu6098 -1.6 -1.1 transcriptional regulator, HTH family compare
Atu1449 -1.6 -5.6 potassium uptake protein compare
Atu0784 -1.5 -3.3 hypothetical protein compare
Atu1446 -1.4 -2.0 two component response regulator compare
Atu1339 -1.4 -3.3 ribonuclease E compare
Atu4217 -1.4 -0.9 TetR family transcriptional regulator compare
Atu1357 -1.4 -7.7 hypothetical protein compare
Atu0188 -1.4 -0.9 ABC transporter, membrane spanning protein (peptide) compare
Atu1177 -1.4 -3.3 hypothetical protein compare
Atu1356 -1.4 -7.1 hypothetical protein compare
Atu2578 -1.3 -3.3 cAMP-dependent protein kinase regulatory subunit compare
Atu0759 -1.3 -7.1 hypothetical protein compare
Atu3779 -1.3 -6.6 lytic murein transglycosylase compare
Atu2044 -1.2 -4.5 HFLC protein compare
Atu0043 -1.2 -1.9 imidazoleglycerol-phosphate dehydratase compare
Atu8138 -1.2 -1.5 hypothetical protein compare
Atu0331 -1.2 -1.8 sigma-54 modulation protein compare
Atu1619 -1.2 -1.8 protein-export membrane protein SECG compare
Atu4728 -1.2 -9.2 ABC transporter permease compare
Atu1303 -1.2 -8.4 exoribonuclease compare
Atu3727 -1.2 -3.1 hypothetical protein compare
Atu8096 -1.2 -1.8 hypothetical protein compare
Atu0434 -1.2 -1.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2710 -1.1 -1.5 hypothetical protein compare
Atu1678 -1.1 -3.5 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu4897 -1.1 -1.2 hypothetical protein compare
Atu1445 -1.1 -3.6 two component sensor kinase compare
Atu0031 -1.1 -0.9 PTS system, IIA component compare
Atu1838 -1.1 -1.4 ABC transporter, substrate binding protein (amino acid) compare
Atu2045 -1.1 -3.7 HFLK protein compare
Atu1175 -1.1 -1.8 hypothetical protein compare
Atu0361 -1.1 -1.5 transcriptional regulator compare
Atu0897 -1.1 -7.9 protease II compare
Atu0189 -1.0 -0.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0141 -1.0 -1.3 cytochrome O ubiquinol oxidase subunit I compare
Atu1360 -1.0 -5.8 hypothetical protein compare
Atu1484 -1.0 -3.8 transcriptional regulator compare
Atu8191 -1.0 -1.7 hypothetical protein compare
Atu2579 -1.0 -4.5 metal dependant beta lactamase protein compare
Atu0562 -0.9 -2.5 flagellar motor switch protein FliN compare
Atu2200 -0.9 -2.2 cold shock protein compare
Atu1149 -0.9 -1.6 adenylate cyclase compare
Atu1447 -0.9 -0.9 two component sensor kinase compare
Atu0690 -0.9 -1.5 hypothetical protein compare
Atu0340 -0.9 -1.5 SAM dependent methyltransferase compare
Atu2824 -0.9 -1.8 hypothetical protein compare
Atu2694 -0.9 -1.9 hypothetical protein compare
Atu1868 -0.9 -3.7 tRNA/rRNA methyltransferase compare
Atu0846 -0.9 -2.7 transcriptional regulator, MarR family compare
Atu2205 -0.9 -1.8 transcriptional regulator, MarR family compare
Atu0368 -0.8 -2.6 tRNA pseudouridine synthase I compare
Atu1784 -0.8 -5.0 hypothetical protein compare
Atu6189 -0.8 -1.3 protein secretion chaperone compare
Atu0290 -0.8 -4.2 rare lipoprotein A compare
Atu3202 -0.8 -6.3 RND multidrug efflux transporter compare
Atu1030 -0.8 -0.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu5540 -0.8 -0.9 hypothetical protein compare
Atu2439 -0.8 -0.5 hypothetical protein compare
Atu1184 -0.8 -2.0 hypothetical protein compare
Atu0544 -0.8 -1.7 hypothetical protein compare
Atu0041 -0.7 -1.0 glutamine amidotransferase compare
Atu1140 -0.7 -3.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2052 -0.7 -0.8 hypothetical protein compare
Atu0687 -0.7 -1.3 hypothetical protein compare
Atu0190 -0.7 -1.5 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0106 -0.7 -4.0 cold shock protein compare
Atu0353 -0.7 -3.3 acetyltransferase compare
Atu1028 -0.7 -1.2 hypothetical protein compare
Atu2333 -0.7 -4.0 ATP-dependent RNA helicase compare
Atu3120 -0.7 -1.1 hypothetical protein compare
Atu2083 -0.7 -1.9 DNA repair protein RecN compare
Atu1679 -0.7 -1.7 peptidyl prolyl cis-trans isomerase compare
Atu2184 -0.7 -2.8 transcriptional regulator, AsnC family compare
Atu3798 -0.7 -3.0 TetR family transcriptional regulator compare
Atu4711 -0.7 -2.8 two component sensor kinase compare
Atu1023 -0.7 -1.5 hypothetical protein compare
Atu4502 -0.7 -3.2 cobalamin synthesis protein compare
Atu0977 -0.7 -1.2 serine protease DO-like protease compare
Atu2237 -0.7 -2.5 cytochrome c1 compare
Atu4063 -0.7 -4.5 O-linked GlcNAc transferase compare
Atu1358 -0.7 -2.7 hypothetical protein compare
Atu1685 -0.7 -0.7 hypothetical protein compare
Atu2114 -0.7 -2.6 molecular chaperone, DnaJ family compare
Atu3144 -0.6 -2.6 GntR family transcriptional regulator compare
Atu3203 -0.6 -3.5 RND multidrug efflux membrane permease compare
Atu2656 -0.6 -3.2 hypothetical protein compare
Atu3718 -0.6 -2.4 hypothetical protein compare
Atu4099 -0.6 -3.4 hypothetical protein compare
Atu2614 -0.6 -3.0 hypothetical protein compare
Atu5007 -0.6 -3.2 santhopine-responsive transcriptional repressor compare
Atu4779 -0.6 -1.2 hypothetical protein compare
Atu4077 -0.6 -3.0 glycogen branching protein compare
Atu0966 -0.6 -1.6 hypothetical protein compare
Atu2070 -0.6 -3.9 aminopeptidase P compare
Atu0211 -0.6 -3.1 hypothetical protein compare
Atu8036 -0.6 -1.6 protein YBGT-like protein compare
Atu3697 -0.6 -1.4 ATP-dependent protease LA 2 compare
Atu8176 -0.6 -1.4 hypothetical protein compare
Atu1134 -0.6 -3.8 hypothetical protein compare
Atu1739 -0.6 -1.4 permease compare
Atu1258 -0.6 -2.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu1573 -0.6 -1.0 hypothetical protein compare
Atu3757 -0.6 -1.4 hypothetical protein compare
Atu1457 -0.6 -1.7 hypothetical protein compare
Atu0765 -0.6 -2.8 TldD compare
Atu2169 -0.6 -2.0 hypothetical protein compare
Atu0920 -0.6 -2.1 hypothetical protein compare
Atu1714 -0.6 -0.8 exonuclease III compare
Atu4491 -0.6 -2.9 hypothetical protein compare
Atu8161 -0.6 -1.2 hypothetical protein compare
Atu0490 -0.6 -2.7 hypothetical protein compare
Atu2664 -0.6 -4.0 peptidyl-dipeptidase compare
Atu4837 -0.6 -2.3 hypothetical protein compare
Atu2511 -0.6 -2.7 D-alanine aminotransferase compare
Atu0272 -0.6 -2.9 transcriptional regulator, MarR family compare
Atu0971 -0.6 -0.4 two component sensor kinase compare
Atu6065 -0.6 -3.1 conserved hypothetical protein compare
Atu0007 -0.6 -3.1 hypothetical protein compare
Atu0854 -0.6 -1.6 hypothetical protein compare
Atu4166 -0.6 -1.3 UDP-glucose 4-epimerase compare
Atu2450 -0.6 -1.1 hypothetical protein compare
Atu3765 -0.6 -4.5 oligoendopeptidase F compare
Atu0524 -0.6 -3.2 transcriptional regulator, LuxR family compare
Atu0184 -0.6 -1.7 glucokinase compare
Atu2660 -0.6 -3.1 hypothetical protein compare
Atu8087 -0.6 -0.7 putative peptidoglycan binding protein compare
Atu2406 -0.6 -1.1 hypothetical protein compare
Atu0388 -0.5 -3.6 two component sensor kinase compare
Atu3634 -0.5 -2.2 penicillin-binding protein dacf precursor compare
Atu1565 -0.5 -2.0 serine acetyltransferase compare
Atu0843 -0.5 -3.5 P type cation (metal) transporter, ATPase component compare
Atu0499 -0.5 -2.9 hypothetical protein compare
Atu4669 -0.5 -2.9 hypothetical protein compare
Atu1325 -0.5 -1.7 acetyltransferase compare
Atu2655 -0.5 -2.5 hypothetical protein compare
Atu3289 -0.5 -1.2 thiamine-phosphate pyrophosphorylase compare
Atu0233 -0.5 -3.3 lysozyme compare
Atu2080 -0.5 -2.7 acetyltransferase compare
Atu4418 -0.5 -1.4 glutaryl-CoA dehydrogenase compare
Atu4792 -0.5 -1.0 hypothetical protein compare
Atu8095 -0.5 -2.8 hypothetical protein compare
Atu3668 -0.5 -1.3 siderophore biosynthesis protein compare
Atu0972 -0.5 -0.9 lipA protein compare
Atu2728 -0.5 -0.3 beta (1-->2) glucan export ATP-binding protein compare
Atu0693 -0.5 -3.2 PmbA/TldD related protein compare
Atu1369 -0.5 -2.5 HIT family protein compare
Atu3461 -0.5 -0.9 GntR family transcriptional regulator compare
Atu1511 -0.5 -1.5 hypothetical protein compare
Atu1793 -0.5 -2.9 phosphatidylcholine synthase compare
Atu1515 -0.5 -1.9 hypothetical protein compare
Atu8168 -0.5 -1.6 hypothetical protein compare
Atu1781 -0.5 -2.0 hypothetical protein compare
Atu0103 -0.5 -3.4 penicillin-binding protein compare
Atu5047 -0.5 -1.8 hypothetical protein compare
Atu2640 -0.5 -1.0 hypothetical protein compare
Atu0895 -0.5 -0.6 ABC transporter, substrate binding protein compare
Atu4161 -0.5 -1.0 hypothetical protein compare
Atu0467 -0.5 -1.9 hypothetical protein compare
Atu1099 -0.5 -2.3 hypothetical protein compare
Atu4407 -0.5 -1.1 periplasmic nitrate reductase, NapD protein compare
Atu2040 -0.5 -1.5 phosphoserine phosphatase compare
Atu2730 -0.5 -3.9 beta (1-->2) glucan biosynthesis protein compare
Atu0535 -0.5 -1.6 hypothetical protein compare
Atu0999 -0.5 -1.8 magnesium transport protein compare
Atu3750 -0.5 -1.2 thiamine-phosphate pyrophosphorylase compare
Atu4214 -0.5 -2.1 cold shock protein compare


Specific Phenotypes

For 12 genes in this experiment

For stress Hygromycin B in Agrobacterium fabrum C58

For stress Hygromycin B across organisms