Experiment set24S527 for Agrobacterium fabrum C58

Compare to:

LB with Hygromycin B 12.5 ug/mL

200 most important genes:

  gene name fitness t score description  
Atu1021 -3.5 -3.4 outer membrane protein compare
Atu2591 -3.0 -9.9 glucosyltransferase compare
Atu2583 -2.6 -12.5 glycosyltransferase compare
Atu2584 -2.6 -6.4 hypothetical protein compare
Atu2590 -2.5 -9.6 hypothetical protein compare
Atu2585 -2.5 -6.0 hypothetical protein compare
Atu6165 -2.4 -2.3 hypothetical protein compare
Atu4149 -2.4 -10.1 UDP-glucose 6-dehydrogenase compare
Atu2592 -2.2 -7.0 hypothetical protein compare
Atu4148 -2.2 -6.8 UDP-glucuronic acid epimerase compare
Atu2582 -2.1 -7.5 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1446 -2.1 -2.4 two component response regulator compare
Atu0769 -2.1 -1.9 protoheme IX farnesyltransferase compare
Atu0995 -1.8 -7.8 hypothetical protein compare
Atu2692 -1.6 -3.3 intracellular septation protein compare
Atu8167 -1.6 -5.8 putative transmembrane protein compare
Atu1356 -1.5 -7.0 hypothetical protein compare
Atu0031 -1.5 -1.0 PTS system, IIA component compare
Atu1175 -1.5 -2.1 hypothetical protein compare
Atu0895 -1.5 -1.0 ABC transporter, substrate binding protein compare
Atu1339 -1.5 -2.0 ribonuclease E compare
Atu2207 -1.4 -2.8 two component sensor kinase compare
Atu4610 -1.4 -6.9 sugar nucleotide epimerase/dehydratase compare
Atu2577 -1.4 -10.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu4317 -1.4 -1.8 TetR family transcriptional regulator compare
Atu6098 -1.4 -0.9 transcriptional regulator, HTH family compare
Atu1028 -1.3 -1.6 hypothetical protein compare
Atu4217 -1.3 -0.8 TetR family transcriptional regulator compare
Atu1619 -1.3 -1.6 protein-export membrane protein SECG compare
Atu0894 -1.3 -0.8 ABC transporter, membrane spanning protein compare
Atu2368 -1.2 -1.2 hypothetical protein compare
Atu1225 -1.2 -1.4 hypothetical protein compare
Atu2682 -1.2 -2.5 hypothetical protein compare
Atu3461 -1.2 -2.1 GntR family transcriptional regulator compare
Atu1357 -1.2 -6.9 hypothetical protein compare
Atu0677 -1.2 -2.2 hypothetical protein compare
Atu1495 -1.2 -2.4 hypothetical protein compare
Atu3423 -1.1 -2.1 hypothetical protein compare
Atu0331 -1.1 -1.6 sigma-54 modulation protein compare
Atu0190 -1.1 -1.5 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2831 -1.1 -2.0 glucose inhibited division protein A compare
Atu0784 -1.1 -2.5 hypothetical protein compare
Atu2832 -1.1 -1.7 tRNA modification GTPase compare
Atu0809 -1.1 -1.1 hypothetical protein compare
Atu8168 -1.1 -2.6 hypothetical protein compare
Atu0354 -1.1 -1.2 ferric uptake regulator compare
Atu0399 -1.1 -3.2 dihydroorotase compare
Atu1838 -1.1 -1.0 ABC transporter, substrate binding protein (amino acid) compare
Atu0977 -1.0 -1.9 serine protease DO-like protease compare
Atu1469 -1.0 -1.7 hypothetical protein compare
Atu2205 -1.0 -2.7 transcriptional regulator, MarR family compare
Atu3579 -1.0 -2.8 lactoylglutathione lyase compare
Atu0920 -1.0 -2.8 hypothetical protein compare
Atu1308 -0.9 -4.3 aspartate carbamoyl transferase catalytic subunit compare
Atu2634 -0.9 -1.4 hypothetical protein compare
Atu3120 -0.9 -1.0 hypothetical protein compare
Atu1364 -0.9 -2.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1677 -0.9 -2.0 queuine tRNA-ribosyltransferase compare
Atu1971 -0.9 -2.6 hypothetical protein compare
Atu4530 -0.9 -2.8 TetR family transcriptional regulator compare
Atu2163 -0.9 -1.0 hypothetical protein compare
Atu2656 -0.9 -3.7 hypothetical protein compare
Atu1760 -0.9 -0.8 hypothetical protein compare
Atu2472 -0.8 -1.2 hypothetical protein compare
Atu3727 -0.8 -2.2 hypothetical protein compare
Atu0999 -0.8 -2.7 magnesium transport protein compare
Atu1258 -0.8 -3.2 ATP-dependent Clp protease, proteolytic subunit compare
Atu0434 -0.8 -1.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0189 -0.8 -0.7 ABC transporter, membrane spanning protein (peptide) compare
Atu2824 -0.8 -1.6 hypothetical protein compare
Atu8041 -0.8 -1.7 hypothetical protein compare
Atu6189 -0.8 -1.0 protein secretion chaperone compare
Atu1513 -0.8 -2.7 ABC excinuclease subunit A compare
Atu4072 -0.8 -0.7 nodulation protein N compare
Atu5485 -0.8 -1.9 hypothetical protein compare
Atu1570 -0.8 -0.9 hypothetical protein compare
Atu0486 -0.8 -2.4 dihydroorotate dehydrogenase compare
Atu2722 -0.8 -3.1 porin compare
Atu3678 -0.8 -2.2 siderophore biosynthesis protein compare
Atu8018 -0.8 -0.8 hypothetical protein compare
Atu0029 -0.8 -2.4 S-adenosylhomocysteine hydrolase compare
Atu4093 -0.8 -1.8 hypothetical protein compare
Atu0422 -0.8 -1.1 ABC transporter, membrane spanning protein compare
Atu5489 -0.7 -1.5 hypothetical protein compare
Atu1518 -0.7 -2.6 transcriptional regulator, Fur family compare
Atu1793 -0.7 -2.9 phosphatidylcholine synthase compare
Atu4068 -0.7 -1.7 sarcosine oxidase delta subunit compare
Atu2335 -0.7 -0.9 hypothetical protein compare
Atu1387 -0.7 -1.6 transcriptional regulator, GntR family compare
Atu1449 -0.7 -3.0 potassium uptake protein compare
Atu2554 -0.7 -1.2 lysyl-tRNA synthetase compare
Atu2045 -0.7 -2.6 HFLK protein compare
Atu8166 -0.7 -1.9 hypothetical protein compare
Atu4234 -0.7 -2.6 amino acid ABC transporter permease compare
Atu0109 -0.7 -1.6 transcriptional regulator, MarR family compare
Atu1182 -0.7 -1.0 hypothetical protein compare
Atu1759 -0.7 -3.9 L-serine dehydratase compare
Atu4711 -0.7 -2.6 two component sensor kinase compare
Atu2439 -0.7 -0.4 hypothetical protein compare
Atu0535 -0.7 -2.0 hypothetical protein compare
Atu1204 -0.7 -2.3 potassium uptake protein compare
Atu2286 -0.7 -1.1 hypothetical protein compare
Atu1588 -0.7 -2.0 homoserine dehydrogenase compare
Atu1303 -0.7 -4.6 exoribonuclease compare
Atu2249 -0.7 -0.9 hypothetical protein compare
Atu4792 -0.7 -0.7 hypothetical protein compare
Atu1447 -0.7 -0.9 two component sensor kinase compare
Atu3400 -0.7 -1.2 hypothetical protein compare
Atu4214 -0.7 -2.2 cold shock protein compare
Atu0795 -0.7 -1.3 hypothetical protein compare
Atu1076 -0.7 -1.7 colicin V production protein compare
Atu1131 -0.7 -3.4 outer membrane protein compare
Atu2169 -0.7 -2.0 hypothetical protein compare
Atu1515 -0.7 -2.3 hypothetical protein compare
Atu3698 -0.7 -2.1 thioredoxin compare
Atu1573 -0.7 -1.0 hypothetical protein compare
Atu4470 -0.7 -2.7 iron ABC transporter ATPase compare
Atu4518 -0.6 -2.6 branched chain amino acid ABC transporter permease compare
Atu3739 -0.6 -1.8 phosphoglycerate kinase compare
Atu2036 -0.6 -0.7 acetolactate synthase III, large subunit compare
Atu4454 -0.6 -2.0 RpiR family transcriptional regulator compare
Atu2662 -0.6 -0.7 acetyltransferase compare
Atu3064 -0.6 -2.5 ABC transporter permease compare
Atu3469 -0.6 -1.3 phosphoglyceromutase compare
Atu3466 -0.6 -1.2 ArsR family transcriptional regulator compare
Atu6045 -0.6 -1.2 replication protein C compare
Atu0141 -0.6 -0.8 cytochrome O ubiquinol oxidase subunit I compare
Atu8096 -0.6 -1.0 hypothetical protein compare
Atu1774 -0.6 -1.1 ABC transporter, substrate binding protein (peptide) compare
Atu2333 -0.6 -2.7 ATP-dependent RNA helicase compare
Atu2114 -0.6 -2.0 molecular chaperone, DnaJ family compare
Atu1646 -0.6 -1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu2040 -0.6 -1.7 phosphoserine phosphatase compare
Atu2579 -0.6 -3.0 metal dependant beta lactamase protein compare
Atu3627 -0.6 -1.8 hypothetical protein compare
Atu0298 -0.6 -2.7 orotidine 5 compare
Atu0660 -0.6 -2.6 hydrolase compare
Atu1359 -0.6 -0.5 dnaK deletion suppressor protein compare
Atu1099 -0.6 -2.5 hypothetical protein compare
Atu4117 -0.6 -2.4 dipeptide ABC transporter ATPase compare
Atu3730 -0.6 -0.6 hypothetical protein compare
Atu2052 -0.6 -0.8 hypothetical protein compare
Atu2028 -0.6 -1.1 transcriptional regulator, ArsR family compare
Atu1467 -0.6 -1.8 hypothetical protein compare
Atu1781 -0.6 -2.3 hypothetical protein compare
Atu4366 -0.6 -2.0 short chain dehydrogenase compare
Atu0971 -0.6 -0.4 two component sensor kinase compare
Atu0043 -0.6 -0.9 imidazoleglycerol-phosphate dehydratase compare
Atu1689 -0.6 -2.3 molybdenum cofactor biosynthesis protein C compare
Atu0142 -0.6 -1.5 cytochrome o ubiquinol oxidase subunit II compare
Atu8094 -0.6 -1.8 hypothetical protein compare
Atu1291 -0.6 -0.8 hypothetical protein compare
Atu1149 -0.6 -0.8 adenylate cyclase compare
Atu2433 -0.6 -0.8 hypothetical protein compare
Atu0679 -0.5 -2.4 ATP phosphoribosyltransferase compare
Atu2578 -0.5 -2.6 cAMP-dependent protein kinase regulatory subunit compare
Atu1818 -0.5 -1.2 hypothetical protein compare
Atu0689 -0.5 -3.5 ribosomal large subunit pseudouridine synthase B compare
Atu2238 -0.5 -2.2 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1784 -0.5 -2.7 hypothetical protein compare
Atu0499 -0.5 -2.8 hypothetical protein compare
Atu2120 -0.5 -2.1 O-methyltransferase compare
Atu2281 -0.5 -2.9 ABC transporter, substrate binding protein (proline/glycine betaine) compare
Atu1062 -0.5 -1.1 phosphatidylserine synthase compare
Atu2267 -0.5 -2.1 hypothetical protein compare
Atu3634 -0.5 -1.4 penicillin-binding protein dacf precursor compare
Atu1904 -0.5 -1.1 transcriptional regulator compare
Atu8025 -0.5 -0.9 hypothetical protein compare
Atu1445 -0.5 -2.0 two component sensor kinase compare
Atu0184 -0.5 -1.1 glucokinase compare
Atu2057 -0.5 -0.8 DNA helicase II compare
Atu1847 -0.5 -1.1 hypothetical protein compare
Atu1140 -0.5 -1.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1327 -0.5 -1.6 NADH-ubiquinone oxidoreductase compare
Atu0836 -0.5 -1.1 Glutathione-S-transferase compare
Atu5028 -0.5 -1.8 IS426 transposase compare
Atu0496 -0.5 -1.9 hypothetical protein compare
Atu4245 -0.5 -1.7 polyamine ABC transporter permease compare
Atu4838 -0.5 -2.2 outer membrane lipoprotein compare
Atu4077 -0.5 -2.3 glycogen branching protein compare
Atu4677 -0.5 -0.8 hypothetical protein compare
Atu3780 -0.5 -1.7 hypothetical protein compare
Atu3264 -0.5 -1.6 IclR family transcriptional regulator compare
Atu0897 -0.5 -3.7 protease II compare
Atu3750 -0.5 -1.0 thiamine-phosphate pyrophosphorylase compare
Atu0460 -0.5 -2.0 hypothetical protein compare
Atu3009 -0.5 -0.6 exopolysaccharide production protein compare
Atu0339 -0.5 -1.0 hypothetical protein compare
Atu2549 -0.5 -2.0 transcriptional regulator, TetR family compare
Atu0893 -0.5 -0.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0272 -0.5 -1.7 transcriptional regulator, MarR family compare
Atu1360 -0.5 -3.0 hypothetical protein compare
Atu0587 -0.5 -2.2 teichoic acid biosynthesis protein compare
Atu6121 -0.5 -2.7 conserved hypothetical protein compare
Atu0185 -0.5 -2.7 methylglyoxal synthase compare
Atu0188 -0.5 -0.4 ABC transporter, membrane spanning protein (peptide) compare
Atu3295 -0.5 -1.5 hypothetical protein compare
Atu1223 -0.5 -0.7 hypothetical protein compare
Atu1725 -0.5 -1.1 hypothetical protein compare
Atu0824 -0.5 -0.6 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress Hygromycin B in Agrobacterium fabrum C58

For stress Hygromycin B across organisms