Experiment set24S524 for Agrobacterium fabrum C58

Compare to:

LB with Erythromycin 12.5 ug/mL

200 most important genes:

  gene name fitness t score description  
Atu2550 -5.8 -14.4 RND multidrug efflux membrane permease compare
Atu2551 -5.5 -12.8 RND multidrug efflux transporter conserved
Atu0357 -5.1 -8.4 phosphate starvation inducible protein conserved
Atu1131 -4.8 -4.7 outer membrane protein compare
Atu8147 -4.6 -11.9 hypothetical protein compare
Atu0257 -4.5 -8.5 hypothetical protein compare
Atu3779 -4.5 -8.0 lytic murein transglycosylase compare
Atu2777 -4.3 -12.3 hypothetical protein compare
Atu1303 -4.3 -11.6 exoribonuclease conserved
Atu1644 -4.1 -2.8 hypothetical protein compare
Atu1647 -4.0 -6.0 ABC transporter, membrane spanning protein compare
Atu1451 -3.9 -8.7 GTP-binding protein HFLX conserved
Atu1175 -3.8 -2.4 hypothetical protein compare
Atu2722 -3.8 -7.2 porin compare
Atu0498 -3.8 -9.0 hypothetical protein compare
Atu1447 -3.6 -2.5 two component sensor kinase compare
Atu2304 -3.6 -11.1 bacteroid development protein compare
Atu2207 -3.6 -2.5 two component sensor kinase compare
Atu8130 -3.6 -13.5 hypothetical protein compare
Atu4610 -3.4 -8.8 sugar nucleotide epimerase/dehydratase compare
Atu1177 -3.4 -4.3 hypothetical protein compare
Atu3468 -3.3 -1.5 hypothetical protein compare
Atu1645 -3.3 -3.2 ABC transporter, substrate binding protein compare
Atu2306 -3.3 -8.1 methionine aminopeptidase compare
Atu0876 -3.3 -2.2 superoxide dismutase compare
Atu1619 -3.2 -2.7 protein-export membrane protein SECG compare
Atu0687 -3.2 -2.6 hypothetical protein compare
Atu0233 -3.2 -12.6 lysozyme compare
Atu1359 -3.1 -1.3 dnaK deletion suppressor protein compare
Atu0119 -3.1 -1.9 hypothetical protein compare
Atu8167 -3.0 -6.4 putative transmembrane protein compare
Atu1021 -3.0 -3.3 outer membrane protein compare
Atu1495 -2.9 -3.4 hypothetical protein compare
Atu3798 -2.9 -6.4 TetR family transcriptional regulator compare
Atu0302 -2.9 -8.8 tetrapyrrole methylase family protein compare
Atu0931 -2.8 -9.6 penicillin binding protein compare
Atu1646 -2.7 -3.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu4099 -2.6 -7.1 hypothetical protein compare
Atu3780 -2.6 -5.1 hypothetical protein compare
Atu3496 -2.5 -5.9 hypothetical protein compare
Atu3886 -2.5 -7.6 lysophospholipase compare
Atu1285 -2.4 -5.8 metal dependent hydrolase compare
Atu1658 -2.4 -5.2 conserved protein involved in phosphoglycerol modification of cyclic glucan compare
Atu0525 -2.4 -4.9 transcriptional regulator, LuxR family compare
Atu4072 -2.3 -1.6 nodulation protein N compare
Atu0124 -2.3 -4.8 hypothetical protein compare
Atu1056 -2.3 -4.5 hypothetical protein compare
Atu3608 -2.3 -4.1 hypothetical protein compare
Atu4418 -2.3 -5.1 glutaryl-CoA dehydrogenase compare
Atu3730 -2.2 -1.5 hypothetical protein compare
Atu0972 -2.2 -1.5 lipA protein compare
Atu0780 -2.2 -10.3 hypothetical protein compare
Atu0533 -2.1 -2.8 putative inhibitor of septum formation compare
Atu1369 -2.1 -7.0 HIT family protein compare
Atu1868 -2.1 -6.0 tRNA/rRNA methyltransferase compare
Atu0105 -2.0 -3.7 hypothetical protein compare
Atu0999 -1.9 -3.4 magnesium transport protein compare
Atu1157 -1.9 -6.5 hypothetical protein compare
Atu1076 -1.9 -3.3 colicin V production protein compare
Atu4669 -1.9 -6.6 hypothetical protein compare
Atu0086 -1.9 -1.1 ribosome-binding factor A compare
Atu4346 -1.9 -6.5 hypothetical protein compare
Atu1149 -1.9 -2.2 adenylate cyclase compare
Atu1683 -1.9 -1.2 hypothetical protein compare
Atu2040 -1.9 -3.8 phosphoserine phosphatase compare
Atu0479 -1.8 -5.6 ABC transporter, substrate binding protein (amino acid) compare
Atu1380 -1.8 -9.5 zinc metallopeptidase compare
Atu0249 -1.8 -8.0 ABC transporter, substrate binding protein (sugar) compare
Atu0149 -1.8 -4.3 enoyl-(acyl-carrier-protein) reductase compare
Atu0920 -1.8 -2.4 hypothetical protein compare
Atu0524 -1.8 -6.3 transcriptional regulator, LuxR family compare
Atu2803 -1.8 -3.8 Cobalamin biosynthesis associated protein compare
Atu2554 -1.8 -2.0 lysyl-tRNA synthetase compare
Atu2766 -1.7 -13.2 NAD-glutamate dehydrogenase compare
Atu1103 -1.7 -2.7 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0662 -1.7 -4.9 transcriptional regulator, GntR family compare
Atu4043 -1.7 -6.3 hypothetical protein compare
Atu0659 -1.7 -5.6 NTP pyrophosphohydrolase, MutT family compare
Atu2205 -1.7 -1.2 transcriptional regulator, MarR family compare
Atu1606 -1.7 -4.4 methionine aminopeptidase compare
Atu4148 -1.7 -5.8 UDP-glucuronic acid epimerase compare
Atu0788 -1.6 -4.0 hypothetical protein compare
Atu1793 -1.6 -6.8 phosphatidylcholine synthase compare
Atu1874 -1.6 -1.8 RecA protein compare
Atu1333 -1.6 -2.5 outer membrane protein compare
Atu0050 -1.5 -3.7 two component response regulator compare
Atu8168 -1.5 -3.5 hypothetical protein compare
Atu2584 -1.5 -5.4 hypothetical protein compare
Atu3750 -1.5 -2.6 thiamine-phosphate pyrophosphorylase compare
Atu0925 -1.5 -2.2 hypothetical protein compare
Atu1163 -1.5 -0.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0926 -1.5 -2.6 hypothetical protein compare
Atu0328 -1.4 -5.8 heat-inducible transcription repressor compare
Atu1357 -1.4 -7.2 hypothetical protein compare
Atu1439 -1.4 -1.7 hypothetical protein compare
Atu0010 -1.4 -6.6 hypothetical protein compare
Atu2582 -1.4 -6.0 UDP-glucose/GDP-mannose dehydrogenase compare
Atu3835 -1.4 -4.4 hypothetical protein compare
Atu8025 -1.4 -1.2 hypothetical protein compare
Atu4108 -1.4 -8.3 ribonuclease D compare
Atu0051 -1.4 -3.7 two component sensor kinase compare
Atu3495 -1.4 -7.6 diguanylate cyclase compare
Atu4677 -1.4 -1.4 hypothetical protein compare
Atu3884 -1.3 -5.7 hypothetical protein compare
Atu0769 -1.3 -1.5 protoheme IX farnesyltransferase compare
Atu1685 -1.3 -0.9 hypothetical protein compare
Atu8129 -1.3 -6.6 hypothetical protein compare
Atu6165 -1.3 -1.1 hypothetical protein compare
Atu0684 -1.3 -4.2 hypothetical protein compare
Atu5516 -1.3 -9.7 hypothetical protein compare
Atu2577 -1.3 -9.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu1030 -1.3 -1.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2825 -1.3 -7.5 Sun protein compare
Atu2280 -1.3 -6.6 ABC transporter, membrane spanning protein (proline/glycine betaine) compare
Atu0701 -1.3 -7.1 GGDEF family protein compare
Atu0806 -1.3 -6.8 hypothetical protein compare
Atu5540 -1.3 -1.0 hypothetical protein compare
Atu1227 -1.2 -4.1 hypothetical protein compare
Atu2614 -1.2 -5.1 hypothetical protein compare
Atu2121 -1.2 -6.1 glycosyl hydrolase/lysozyme compare
Atu3718 -1.2 -3.9 hypothetical protein compare
Atu0544 -1.2 -2.0 hypothetical protein compare
Atu5124 -1.2 -7.8 glutamate-1-semialdehyde aminotransferase compare
Atu0499 -1.2 -6.1 hypothetical protein compare
Atu2511 -1.2 -6.3 D-alanine aminotransferase compare
Atu8087 -1.2 -0.9 putative peptidoglycan binding protein compare
Atu0654 -1.2 -5.7 transcriptional regulator, LysR family compare
Atu4007 -1.2 -6.8 arginase compare
Atu1621 -1.2 -3.8 hypothetical protein compare
Atu0141 -1.2 -1.3 cytochrome O ubiquinol oxidase subunit I compare
Atu0220 -1.2 -3.7 components of type IV pilus compare
Atu1838 -1.1 -1.1 ABC transporter, substrate binding protein (amino acid) compare
Atu0565 -1.1 -2.2 hypothetical protein compare
Atu1856 -1.1 -4.2 inositol monophosphatase family protein compare
Atu2727 -1.1 -4.7 transcriptional regulator, LuxR family compare
Atu4505 -1.1 -5.5 LacI family transcriptional regulator compare
Atu2804 -1.1 -6.5 cobaltochelatase subunit compare
Atu1499 -1.1 -5.4 penicillin binding protein conserved
Atu4477 -1.1 -4.5 TetR family transcriptional regulator compare
Atu1159 -1.1 -5.0 arginine-tRNA-protein transferase compare
Atu2590 -1.1 -6.0 hypothetical protein compare
Atu2692 -1.1 -2.8 intracellular septation protein compare
Atu0344 -1.1 -2.0 hypothetical protein compare
Atu3707 -1.1 -1.0 phosphoserine aminotransferase compare
Atu3732 -1.1 -7.5 hemolysin compare
Atu3075 -1.1 -4.4 TetR family transcriptional regulator compare
Atu1845 -1.1 -3.1 phosphoribosylformylglycinamidine synthase I compare
Atu0886 -1.1 -1.2 hypothetical protein compare
Atu1847 -1.1 -1.9 hypothetical protein compare
Atu4540 -1.1 -2.1 protocatechuate 3,4-dioxygenase subunit beta compare
Atu5142 -1.1 -2.1 hypothetical protein compare
Atu1356 -1.1 -5.3 hypothetical protein compare
Atu1130 -1.1 -3.5 dehydrogenase compare
Atu2710 -1.1 -0.7 hypothetical protein compare
Atu2583 -1.1 -6.5 glycosyltransferase compare
Atu3631 -1.0 -3.7 hypothetical protein compare
Atu2281 -1.0 -4.3 ABC transporter, substrate binding protein (proline/glycine betaine) compare
Atu0419 -1.0 -2.4 two component sensor kinase compare
Atu0399 -1.0 -3.2 dihydroorotase compare
Atu3203 -1.0 -4.4 RND multidrug efflux membrane permease conserved
Atu2591 -1.0 -5.7 glucosyltransferase compare
Atu0977 -1.0 -1.8 serine protease DO-like protease compare
Atu2802 -1.0 -3.4 precorrin-8X methylmutase compare
Atu1615 -1.0 -5.0 hypothetical protein compare
Atu2592 -1.0 -4.8 hypothetical protein compare
Atu8131 -1.0 -6.9 pH adaption potassium efflux system protein compare
Atu1677 -1.0 -2.4 queuine tRNA-ribosyltransferase compare
Atu2017 -1.0 -0.9 hypothetical protein compare
Atu1762 -1.0 -6.2 hypothetical protein compare
Atu0591 -1.0 -6.7 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu1474 -1.0 -3.2 hypothetical protein compare
Atu0225 -1.0 -0.9 hypothetical protein compare
Atu2279 -1.0 -4.3 ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) compare
Atu2807 -1.0 -3.6 cob(I)alamin adenosyltransferase compare
Atu4040 -1.0 -2.2 hypothetical protein compare
Atu0361 -1.0 -1.2 transcriptional regulator compare
Atu0355 -1.0 -4.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu0103 -0.9 -5.8 penicillin-binding protein compare
Atu1478 -0.9 -4.9 hypothetical protein compare
Atu0759 -0.9 -5.5 hypothetical protein compare
Atu3267 -0.9 -2.2 dipeptide ABC transporter permease compare
Atu0009 -0.9 -4.2 membrane-bound lytic murein transglycosylase compare
Atu0566 -0.9 -1.1 hypothetical protein compare
Atu3634 -0.9 -3.3 penicillin-binding protein dacf precursor compare
Atu1213 -0.9 -1.6 hypothetical protein compare
Atu1601 -0.9 -5.1 oxygen-independent coproporphyrinogen III oxidase compare
Atu3616 -0.9 -3.7 hypothetical protein compare
Atu2229 -0.9 -4.7 ABC transporter, substrate binding protein (amino acid) compare
Atu0298 -0.9 -3.9 orotidine 5 compare
Atu2801 -0.9 -1.9 precorrin-2 C20 methyltransferase compare
Atu3777 -0.9 -4.7 hypothetical protein compare
Atu0212 -0.9 -3.7 hypothetical protein compare
Atu2428 -0.9 -3.8 exopolysaccharide production protein PssB compare
Atu0510 -0.9 -4.5 pH adaption potassium efflux system protein compare
Atu3494 -0.9 -3.4 hypothetical protein compare
Atu3740 -0.9 -3.8 fructose bisphosphate aldolase compare
Atu3623 -0.9 -1.9 DnaJ family molecular chaperone compare
Atu1028 -0.9 -0.8 hypothetical protein compare
Atu3754 -0.9 -2.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1182 -0.9 -1.3 hypothetical protein compare


Specific Phenotypes

For 86 genes in this experiment

For stress Erythromycin in Agrobacterium fabrum C58

For stress Erythromycin across organisms