Experiment set24S522 for Agrobacterium fabrum C58

Compare to:

LB with Erythromycin 6.25 ug/mL

200 most important genes:

  gene name fitness t score description  
Atu2550 -7.1 -10.8 RND multidrug efflux membrane permease compare
Atu2551 -5.9 -10.6 RND multidrug efflux transporter compare
Atu1303 -5.3 -8.8 exoribonuclease compare
Atu0257 -4.5 -8.0 hypothetical protein compare
Atu1644 -4.3 -2.9 hypothetical protein compare
Atu1647 -4.1 -4.8 ABC transporter, membrane spanning protein compare
Atu1646 -3.9 -2.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu1447 -3.8 -2.6 two component sensor kinase compare
Atu1175 -3.8 -2.7 hypothetical protein compare
Atu4610 -3.6 -10.3 sugar nucleotide epimerase/dehydratase compare
Atu1645 -3.5 -3.4 ABC transporter, substrate binding protein compare
Atu3779 -3.3 -9.4 lytic murein transglycosylase compare
Atu2207 -3.1 -3.0 two component sensor kinase compare
Atu1131 -3.1 -8.5 outer membrane protein compare
Atu0687 -2.7 -3.2 hypothetical protein compare
Atu0357 -2.6 -9.3 phosphate starvation inducible protein compare
Atu1451 -2.6 -9.2 GTP-binding protein HFLX conserved
Atu4072 -2.6 -1.7 nodulation protein N compare
Atu3730 -2.5 -1.6 hypothetical protein compare
Atu1619 -2.4 -1.9 protein-export membrane protein SECG compare
Atu1021 -2.3 -2.9 outer membrane protein compare
Atu8167 -2.1 -6.6 putative transmembrane protein compare
Atu2722 -2.1 -6.4 porin compare
Atu2304 -2.0 -9.5 bacteroid development protein compare
Atu2205 -1.9 -3.2 transcriptional regulator, MarR family compare
Atu0086 -1.9 -1.2 ribosome-binding factor A compare
Atu3886 -1.9 -7.9 lysophospholipase compare
Atu8147 -1.8 -9.4 hypothetical protein compare
Atu0926 -1.8 -4.4 hypothetical protein compare
Atu1359 -1.8 -1.2 dnaK deletion suppressor protein compare
Atu2777 -1.7 -7.2 hypothetical protein compare
Atu1163 -1.6 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu8130 -1.6 -9.3 hypothetical protein compare
Atu1838 -1.5 -1.0 ABC transporter, substrate binding protein (amino acid) compare
Atu1177 -1.5 -3.3 hypothetical protein compare
Atu0141 -1.5 -1.4 cytochrome O ubiquinol oxidase subunit I compare
Atu1446 -1.5 -1.9 two component response regulator compare
Atu0479 -1.5 -5.5 ABC transporter, substrate binding protein (amino acid) compare
Atu0399 -1.5 -4.0 dihydroorotase compare
Atu0769 -1.4 -1.6 protoheme IX farnesyltransferase compare
Atu1793 -1.4 -5.4 phosphatidylcholine synthase compare
Atu4317 -1.4 -2.0 TetR family transcriptional regulator compare
Atu4099 -1.4 -5.9 hypothetical protein compare
Atu1030 -1.4 -1.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1356 -1.4 -6.1 hypothetical protein compare
Atu0498 -1.4 -5.0 hypothetical protein compare
Atu4677 -1.4 -1.6 hypothetical protein compare
Atu0302 -1.4 -7.1 tetrapyrrole methylase family protein compare
Atu0972 -1.4 -1.9 lipA protein compare
Atu3780 -1.4 -3.9 hypothetical protein compare
Atu1056 -1.4 -3.5 hypothetical protein compare
Atu1028 -1.3 -1.6 hypothetical protein compare
Atu0124 -1.3 -4.0 hypothetical protein compare
Atu4217 -1.3 -0.8 TetR family transcriptional regulator compare
Atu1357 -1.3 -6.9 hypothetical protein compare
Atu0533 -1.3 -1.9 putative inhibitor of septum formation compare
Atu2634 -1.3 -2.0 hypothetical protein compare
Atu2710 -1.3 -0.9 hypothetical protein compare
Atu3496 -1.2 -4.8 hypothetical protein compare
Atu3798 -1.2 -5.0 TetR family transcriptional regulator compare
Atu1469 -1.2 -3.0 hypothetical protein compare
Atu0931 -1.2 -6.3 penicillin binding protein compare
Atu4418 -1.2 -2.9 glutaryl-CoA dehydrogenase compare
Atu3120 -1.2 -1.4 hypothetical protein compare
Atu1658 -1.2 -4.0 conserved protein involved in phosphoglycerol modification of cyclic glucan compare
Atu0149 -1.2 -3.5 enoyl-(acyl-carrier-protein) reductase compare
Atu1076 -1.2 -2.6 colicin V production protein compare
Atu0920 -1.1 -3.3 hypothetical protein compare
Atu1683 -1.1 -1.0 hypothetical protein compare
Atu2554 -1.1 -1.6 lysyl-tRNA synthetase compare
Atu0486 -1.1 -3.1 dihydroorotate dehydrogenase compare
Atu0220 -1.1 -3.6 components of type IV pilus compare
Atu4148 -1.1 -4.0 UDP-glucuronic acid epimerase compare
Atu0780 -1.1 -5.3 hypothetical protein compare
Atu1285 -1.1 -4.3 metal dependent hydrolase compare
Atu0030 -1.1 -1.3 phosphocarrier protein HPr compare
Atu0788 -1.0 -2.6 hypothetical protein compare
Atu0361 -1.0 -1.3 transcriptional regulator compare
Atu2692 -1.0 -2.6 intracellular septation protein compare
Atu2306 -1.0 -2.9 methionine aminopeptidase compare
Atu3718 -1.0 -4.8 hypothetical protein compare
Atu0050 -1.0 -2.7 two component response regulator compare
Atu3835 -1.0 -3.0 hypothetical protein compare
Atu0894 -1.0 -0.8 ABC transporter, membrane spanning protein compare
Atu0269 -1.0 -2.6 exodeoxyribonuclease VII large subunit compare
Atu3413 -1.0 -2.4 AsnC family transcriptional regulator compare
Atu4043 -0.9 -4.9 hypothetical protein compare
Atu2766 -0.9 -7.5 NAD-glutamate dehydrogenase compare
Atu3249 -0.9 -3.6 septum formation inhibitor compare
Atu2592 -0.9 -4.4 hypothetical protein compare
Atu8161 -0.9 -1.6 hypothetical protein compare
Atu0499 -0.9 -5.0 hypothetical protein compare
Atu4505 -0.9 -3.8 LacI family transcriptional regulator compare
Atu0812 -0.9 -2.0 hypothetical protein compare
Atu2824 -0.9 -1.7 hypothetical protein compare
Atu0233 -0.9 -5.3 lysozyme compare
Atu3667 -0.9 -2.3 aspartate alpha-decarboxylase compare
Atu0999 -0.8 -2.6 magnesium transport protein compare
Atu1369 -0.8 -3.8 HIT family protein compare
Atu0043 -0.8 -1.4 imidazoleglycerol-phosphate dehydratase compare
Atu0225 -0.8 -0.9 hypothetical protein compare
Atu3740 -0.8 -4.0 fructose bisphosphate aldolase compare
Atu3750 -0.8 -1.6 thiamine-phosphate pyrophosphorylase compare
Atu2281 -0.8 -4.3 ABC transporter, substrate binding protein (proline/glycine betaine) compare
Atu2614 -0.8 -3.7 hypothetical protein compare
Atu1364 -0.8 -2.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu6098 -0.8 -0.6 transcriptional regulator, HTH family compare
Atu2783 -0.8 -2.9 acetyltransferase compare
Atu0806 -0.8 -5.1 hypothetical protein compare
Atu3578 -0.8 -1.6 glycerol-3-phosphate dehydrogenase compare
Atu0925 -0.8 -1.7 hypothetical protein compare
Atu3469 -0.8 -1.5 phosphoglyceromutase compare
Atu1495 -0.8 -1.8 hypothetical protein compare
Atu0565 -0.8 -2.5 hypothetical protein compare
Atu0382 -0.8 -2.6 hypothetical protein compare
Atu2803 -0.8 -2.1 Cobalamin biosynthesis associated protein compare
Atu0105 -0.8 -1.8 hypothetical protein compare
Atu2040 -0.8 -2.2 phosphoserine phosphatase compare
Atu1868 -0.8 -3.1 tRNA/rRNA methyltransferase compare
Atu1333 -0.8 -1.9 outer membrane protein compare
Atu4214 -0.8 -2.0 cold shock protein compare
Atu0230 -0.7 -1.4 hypothetical protein compare
Atu4669 -0.7 -4.2 hypothetical protein compare
Atu1339 -0.7 -1.8 ribonuclease E compare
Atu4897 -0.7 -0.9 hypothetical protein compare
Atu0525 -0.7 -3.4 transcriptional regulator, LuxR family compare
Atu1844 -0.7 -1.2 Phosphoribosylformylglycinamidine synthetase compare
Atu0298 -0.7 -3.2 orotidine 5 compare
Atu2472 -0.7 -1.3 hypothetical protein compare
Atu2439 -0.7 -0.4 hypothetical protein compare
Atu0662 -0.7 -2.9 transcriptional regulator, GntR family compare
Atu0895 -0.7 -0.7 ABC transporter, substrate binding protein compare
Atu3793 -0.7 -5.4 aspartate ammonia-lyase compare
Atu1968 -0.7 -1.2 hypothetical protein compare
Atu8138 -0.7 -0.9 hypothetical protein compare
Atu0978 -0.7 -2.0 two component response regulator compare
Atu1439 -0.7 -0.7 hypothetical protein compare
Atu0660 -0.7 -3.1 hydrolase compare
Atu3668 -0.7 -1.4 siderophore biosynthesis protein compare
Atu3121 -0.7 -0.6 cold shock protein compare
Atu2115 -0.7 -3.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2684 -0.7 -0.8 hypothetical protein compare
Atu4346 -0.6 -2.9 hypothetical protein compare
Atu1475 -0.6 -1.3 hypothetical protein compare
Atu2591 -0.6 -3.2 glucosyltransferase compare
Atu1499 -0.6 -3.5 penicillin binding protein compare
Atu3466 -0.6 -1.7 ArsR family transcriptional regulator compare
Atu3777 -0.6 -3.7 hypothetical protein compare
Atu1189 -0.6 -1.7 hypothetical protein compare
Atu0572 -0.6 -1.8 hypothetical protein compare
Atu3248 -0.6 -2.7 cell division inhibitor compare
Atu3884 -0.6 -3.5 hypothetical protein compare
Atu0190 -0.6 -1.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0009 -0.6 -3.4 membrane-bound lytic murein transglycosylase compare
Atu0977 -0.6 -1.2 serine protease DO-like protease compare
Atu1615 -0.6 -3.2 hypothetical protein compare
Atu4094 -0.6 -2.2 hypothetical protein compare
Atu3075 -0.6 -3.1 TetR family transcriptional regulator compare
Atu2590 -0.6 -3.7 hypothetical protein compare
Atu3608 -0.6 -2.2 hypothetical protein compare
Atu2727 -0.6 -3.0 transcriptional regulator, LuxR family compare
Atu2428 -0.6 -2.8 exopolysaccharide production protein PssB compare
Atu2382 -0.6 -2.5 hypothetical protein compare
Atu4527 -0.6 -0.7 hypothetical protein compare
Atu3518 -0.6 -3.2 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu3757 -0.6 -1.7 hypothetical protein compare
Atu2052 -0.6 -0.7 hypothetical protein compare
Atu2036 -0.6 -0.7 acetolactate synthase III, large subunit compare
Atu0759 -0.6 -3.5 hypothetical protein compare
Atu5125 -0.6 -1.5 GntR family transcriptional regulator compare
Atu2238 -0.6 -2.8 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1566 -0.6 -0.8 hypothetical protein compare
Atu5101 -0.6 -2.3 hypothetical protein compare
Atu3746 -0.6 -1.7 hypothetical protein compare
Atu3295 -0.6 -1.8 hypothetical protein compare
Atu0577 -0.6 -2.2 FLAF protein compare
Atu1184 -0.6 -1.7 hypothetical protein compare
Atu1871 -0.6 -2.2 glutathione S-transferase compare
Atu6131 -0.6 -2.0 TraR Antiactivator compare
Atu6165 -0.6 -0.7 hypothetical protein compare
Atu0010 -0.6 -3.3 hypothetical protein compare
Atu0103 -0.6 -3.9 penicillin-binding protein compare
Atu1698 -0.6 -2.5 molybdopterin-guanine dinucleotide biosynthesis protein A compare
Atu4366 -0.6 -2.1 short chain dehydrogenase compare
Atu8053 -0.5 -1.3 hypothetical protein compare
Atu2511 -0.5 -2.9 D-alanine aminotransferase compare
Atu1565 -0.5 -1.6 serine acetyltransferase compare
Atu1784 -0.5 -2.3 hypothetical protein compare
Atu1159 -0.5 -2.9 arginine-tRNA-protein transferase compare
Atu1896 -0.5 -2.0 hypothetical protein compare
Atu4003 -0.5 -2.4 hypothetical protein compare
Atu3203 -0.5 -2.4 RND multidrug efflux membrane permease compare
Atu3468 -0.5 -0.5 hypothetical protein compare
Atu1845 -0.5 -1.7 phosphoribosylformylglycinamidine synthase I compare
Atu0659 -0.5 -1.9 NTP pyrophosphohydrolase, MutT family compare
Atu3202 -0.5 -4.2 RND multidrug efflux transporter compare
Atu1629 -0.5 -0.7 transcriptional regulator, ArsR family compare
Atu0556 -0.5 -2.2 hypothetical protein compare
Atu3486 -0.5 -1.2 DeoR family transcriptional regulator compare
Atu4093 -0.5 -1.4 hypothetical protein compare


Specific Phenotypes

For 21 genes in this experiment

For stress Erythromycin in Agrobacterium fabrum C58

For stress Erythromycin across organisms