Experiment set24S512 for Agrobacterium fabrum C58

Compare to:

Bethi_Library_OD1.0

200 most important genes:

  gene name fitness t score description  
Atu3908 -4.0 -11.9 GntR family transcriptional regulator compare
Atu1417 -3.6 -7.9 enoyl-CoA hydratase compare
Atu4711 -3.5 -8.0 two component sensor kinase compare
Atu0679 -3.3 -6.3 ATP phosphoribosyltransferase compare
Atu4773 -3.2 -2.2 two component response regulator compare
Atu0163 -3.2 -7.6 tonB protein compare
Atu2040 -3.2 -3.7 phosphoserine phosphatase compare
Atu0162 -3.2 -7.1 biopolymer transport protein compare
Atu1422 -3.1 -10.8 transcriptional regulator, MarR family compare
Atu0537 -3.1 -6.2 histidinol dehydrogenase compare
Atu1075 -3.1 -6.6 amidophosphoribosyltransferase compare
Atu1359 -3.1 -1.6 dnaK deletion suppressor protein compare
Atu1141 -3.1 -7.3 Phosphoribosylglycinamide synthetase compare
Atu0031 -2.9 -1.4 PTS system, IIA component compare
Atu6098 -2.7 -1.4 transcriptional regulator, HTH family compare
Atu1850 -2.6 -4.2 phosphoribosylformylglycinamidine synthetase II compare
Atu0678 -2.5 -5.9 histidyl-tRNA synthetase compare
Atu3754 -2.5 -6.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1845 -2.5 -4.1 phosphoribosylformylglycinamidine synthase I compare
Atu0161 -2.5 -9.6 biopolymer transport protein compare
Atu0647 -2.4 -5.3 phosphoribosylamine--glycine ligase compare
Atu1140 -2.4 -5.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1844 -2.3 -2.7 Phosphoribosylformylglycinamidine synthetase compare
Atu0298 -2.3 -5.9 orotidine 5 compare
Atu4317 -2.3 -2.6 TetR family transcriptional regulator compare
Atu0041 -2.3 -1.5 glutamine amidotransferase compare
Atu1205 -2.2 -10.2 threonine dehydratase compare
Atu3706 -2.2 -3.3 D-3-phosphoglycerate dehydrogenase compare
Atu2522 -2.2 -11.6 agrobacterium chromosomal virulence protein B compare
Atu2249 -2.1 -1.8 hypothetical protein compare
Atu1750 -2.1 -2.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu1588 -2.1 -2.8 homoserine dehydrogenase compare
Atu1419 -2.0 -6.2 transcriptional regulator, GntR family compare
Atu0769 -2.0 -1.8 protoheme IX farnesyltransferase compare
Atu3707 -2.0 -1.3 phosphoserine aminotransferase compare
Atu2207 -2.0 -3.4 two component sensor kinase compare
Atu3120 -1.9 -2.2 hypothetical protein compare
Atu0043 -1.9 -1.8 imidazoleglycerol-phosphate dehydratase compare
Atu3598 -1.9 -1.9 thiol:disulfide interchange protein compare
Atu0486 -1.9 -4.3 dihydroorotate dehydrogenase compare
Atu0399 -1.8 -3.8 dihydroorotase compare
Atu0086 -1.8 -1.2 ribosome-binding factor A compare
Atu2684 -1.8 -1.2 hypothetical protein compare
Atu4346 -1.8 -7.3 hypothetical protein compare
Atu1307 -1.8 -6.0 dihydroorotase compare
Atu1327 -1.7 -4.3 NADH-ubiquinone oxidoreductase compare
Atu0038 -1.7 -3.2 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1364 -1.7 -3.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0400 -1.7 -2.7 orotate phosphoribosyltransferase compare
Atu5125 -1.7 -2.9 GntR family transcriptional regulator compare
Atu0421 -1.7 -1.6 ABC transporter, membrane spanning protein compare
Atu4072 -1.6 -1.4 nodulation protein N compare
Atu3730 -1.6 -1.4 hypothetical protein compare
Atu6020 -1.5 -5.4 conserved hypothetical protein compare
Atu8167 -1.5 -5.8 putative transmembrane protein compare
Atu6019 -1.5 -10.8 D-nopaline dehydrogenase compare
Atu3755 -1.5 -3.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2183 -1.5 -7.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0099 -1.4 -7.9 prephenate dehydratase compare
Atu6153 -1.4 -4.5 conserved hypothetical protein compare
Atu0784 -1.4 -2.2 hypothetical protein compare
Atu2798 -1.4 -3.1 precorrin-6y methyltransferase compare
Atu3485 -1.4 -7.8 short chain dehydrogenase compare
Atu4616 -1.4 -1.2 dTDP-4-dehydrorhamnose reductase compare
Atu0030 -1.4 -1.5 phosphocarrier protein HPr compare
Atu6021 -1.4 -8.8 D-nopaline dehydrogenase compare
Atu1620 -1.4 -6.6 triosephosphate isomerase compare
Atu3311 -1.4 -9.6 phosphomannose isomerase compare
Atu0354 -1.3 -1.2 ferric uptake regulator compare
Atu1308 -1.3 -4.3 aspartate carbamoyl transferase catalytic subunit compare
Atu0153 -1.3 -3.5 transcriptional regulator, Fur family compare
Atu1030 -1.3 -1.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0039 -1.3 -0.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu3885 -1.3 -4.4 inositol monophosphatase compare
Atu1902 -1.3 -4.4 transketolase compare
Atu4618 -1.3 -7.3 dTDP-rhamnose-3,5-epimerase compare
Atu3009 -1.3 -1.6 exopolysaccharide production protein compare
Atu4217 -1.3 -0.8 TetR family transcriptional regulator compare
Atu3353 -1.3 -7.9 mannose-1-phosphate guanylyltransferase compare
Atu3017 -1.2 -1.7 phosphoglyceromutase compare
Atu4166 -1.2 -1.2 UDP-glucose 4-epimerase compare
Atu0269 -1.2 -2.8 exodeoxyribonuclease VII large subunit compare
Atu4614 -1.2 -5.7 glycosyltransferase compare
Atu4887 -1.2 -4.0 hypothetical protein compare
Atu1688 -1.2 -4.8 indole-3-glycerol-phosphate synthase compare
Atu4613 -1.2 -7.7 glycosyltransferase compare
Atu2289 -1.2 -8.6 anthranilate synthase component I and II compare
Atu2347 -1.2 -5.2 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu0017 -1.2 -2.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu8202 -1.2 -3.8 hypothetical protein compare
Atu2791 -1.2 -5.0 3-isopropylmalate dehydrogenase compare
Atu4617 -1.2 -7.4 dTDP-D-glucose-4,6-dehydratase compare
Atu4610 -1.2 -6.6 sugar nucleotide epimerase/dehydratase compare
Atu4055 -1.1 -4.3 endo-1,3-1,4-beta-glycanase compare
Atu1019 -1.1 -1.9 hypothetical protein compare
Atu0190 -1.1 -1.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4608 -1.1 -7.6 hypothetical protein compare
Atu3014 -1.1 -2.8 hypothetical protein compare
Atu8087 -1.1 -1.0 putative peptidoglycan binding protein compare
Atu4882 -1.1 -2.2 hypothetical protein compare
Atu0050 -1.0 -2.7 two component response regulator compare
Atu4502 -1.0 -4.3 cobalamin synthesis protein compare
Atu3963 -1.0 -4.7 GntR family transcriptional regulator compare
Atu3740 -1.0 -5.1 fructose bisphosphate aldolase compare
Atu2650 -1.0 -5.7 glycerol-3-phosphate dehydrogenase compare
Atu1354 -1.0 -0.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3008 -1.0 -1.0 hypothetical protein compare
Atu2709 -1.0 -7.4 3-isopropylmalate dehydratase, large subunit compare
Atu4615 -1.0 -4.9 glucose-1-phosphate thymidylyltransferase compare
Atu2555 -1.0 -1.8 L-lysine 2,3-aminomutase compare
Atu0331 -1.0 -1.4 sigma-54 modulation protein compare
Atu2346 -1.0 -6.2 ABC transporter, membrane spanning protein (sugar) compare
Atu3011 -1.0 -2.8 ArsR family transcriptional regulator compare
Atu3013 -1.0 -3.5 hypothetical protein compare
Atu2718 -1.0 -4.0 homoserine O-succinyltransferase compare
Atu2376 -1.0 -3.0 hypothetical protein compare
Atu3739 -1.0 -2.5 phosphoglycerate kinase compare
Atu0119 -1.0 -1.1 hypothetical protein compare
Atu4609 -1.0 -6.1 glycosyltransferase compare
Atu1535 -1.0 -2.6 cytochrome c oxidase, FixQ chain compare
Atu3509 -0.9 -3.3 hypothetical protein compare
Atu4685 -0.9 -4.4 LacI family transcriptional regulator compare
Atu0795 -0.9 -1.7 hypothetical protein compare
Atu4893 -0.9 -3.3 hypothetical protein compare
Atu2264 -0.9 -5.7 2-isopropylmalate synthase compare
Atu3010 -0.9 -4.9 hypothetical protein compare
Atu3469 -0.9 -1.7 phosphoglyceromutase compare
Atu3144 -0.9 -2.6 GntR family transcriptional regulator compare
Atu0029 -0.9 -2.7 S-adenosylhomocysteine hydrolase compare
Atu4499 -0.9 -3.6 hypothetical protein compare
Atu1513 -0.9 -2.8 ABC excinuclease subunit A compare
Atu2633 -0.9 -1.0 RhtB family transporter compare
Atu5114 -0.9 -2.6 hypothetical protein compare
Atu2058 -0.9 -2.4 hypothetical protein compare
Atu4894 -0.9 -4.0 transposase compare
Atu2125 -0.9 -0.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0690 -0.8 -1.3 hypothetical protein compare
Atu4540 -0.8 -1.9 protocatechuate 3,4-dioxygenase subunit beta compare
Atu1968 -0.8 -1.4 hypothetical protein compare
Atu3019 -0.8 -5.1 hypothetical protein compare
Atu4099 -0.8 -3.0 hypothetical protein compare
Atu4889 -0.8 -3.3 hypothetical protein compare
Atu4514 -0.8 -3.2 RpiR family transcriptional regulator compare
Atu4019 -0.8 -4.1 two component response regulator compare
Atu2073 -0.8 -2.4 membrane protein compare
Atu0051 -0.8 -2.3 two component sensor kinase compare
Atu1163 -0.8 -0.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0152 -0.8 -1.3 hypothetical protein compare
Atu4671 -0.8 -2.4 response regulator compare
Atu2217 -0.8 -2.6 hypothetical protein compare
Atu1468 -0.8 -4.4 hypothetical protein compare
Atu3219 -0.8 -5.6 dihydroxy-acid dehydratase compare
Atu2193 -0.8 -0.8 hypothetical protein compare
Atu2692 -0.8 -2.0 intracellular septation protein compare
Atu4148 -0.8 -2.8 UDP-glucuronic acid epimerase compare
Atu4498 -0.8 -3.6 hypothetical protein compare
Atu0422 -0.8 -1.3 ABC transporter, membrane spanning protein compare
Atu1677 -0.8 -1.4 queuine tRNA-ribosyltransferase compare
Atu4446 -0.8 -3.5 hypothetical protein compare
Atu6145 -0.8 -5.1 arabinose phosphate phosphatase compare
Atu1527 -0.8 -1.4 nitrogen fixation protein FixS compare
Atu4892 -0.8 -5.2 hypothetical protein compare
Atu0346 -0.8 -1.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu4077 -0.8 -3.1 glycogen branching protein compare
Atu2348 -0.7 -3.7 sugar binding protein compare
Atu6018 -0.7 -4.9 arginase compare
Atu6016 -0.7 -5.4 ornithine cyclodeaminase compare
Atu0026 -0.7 -0.7 hypothetical protein compare
Atu6017 -0.7 -5.5 NAD/NADP octopine/nopaline dehydrogenase compare
Atu8161 -0.7 -0.9 hypothetical protein compare
Atu0368 -0.7 -2.0 tRNA pseudouridine synthase I compare
Atu1904 -0.7 -2.1 transcriptional regulator compare
Atu4888 -0.7 -2.6 hypothetical protein compare
Atu0876 -0.7 -0.9 superoxide dismutase compare
Atu3016 -0.7 -3.4 phosphoglyceromutase compare
Atu1678 -0.7 -2.3 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu2379 -0.7 -4.0 phosphomannomutase compare
Atu1705 -0.7 -2.3 SEC-independent protein translocase protein compare
Atu1518 -0.7 -2.5 transcriptional regulator, Fur family compare
Atu0703 -0.7 -1.4 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu2041 -0.7 -1.6 acetyltransferase compare
Atu0912 -0.7 -0.9 Na+/H+ antiporter compare
Atu3486 -0.7 -1.1 DeoR family transcriptional regulator compare
Atu1339 -0.7 -1.4 ribonuclease E compare
Atu5493 -0.7 -1.9 hypothetical protein compare
Atu4686 -0.7 -1.4 hypothetical protein compare
Atu2115 -0.7 -3.6 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu3554 -0.7 -2.1 hypothetical protein compare
Atu2113 -0.7 -1.9 N-acetylmuramoyl-L-alanine amidase compare
Atu4879 -0.7 -3.7 hypothetical protein compare
Atu0499 -0.7 -3.7 hypothetical protein compare
Atu0361 -0.7 -0.9 transcriptional regulator compare
Atu1463 -0.7 -2.2 glycine cleavage system component H compare
Atu3162 -0.7 -3.3 LacI family transcriptional regulator compare
Atu0995 -0.7 -3.6 hypothetical protein compare
Atu6036 -0.7 -1.0 entry-exclusion protein compare
Atu3018 -0.7 -2.3 hypothetical protein compare
Atu2155 -0.7 -5.2 methionine synthase compare
Atu1446 -0.7 -1.1 two component response regulator compare
Atu2001 -0.7 -3.1 excinuclease ABC subunit B compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in in planta experiments

For in planta Bethi_Library_OD1.0 across organisms