Experiment set24S508 for Agrobacterium fabrum C58

Compare to:

Bethi_Library_OD1.0

200 most important genes:

  gene name fitness t score description  
Atu1417 -3.5 -9.3 enoyl-CoA hydratase compare
Atu3908 -3.4 -13.0 GntR family transcriptional regulator compare
Atu1359 -3.2 -1.5 dnaK deletion suppressor protein compare
Atu0162 -3.2 -8.9 biopolymer transport protein compare
Atu2040 -3.1 -4.2 phosphoserine phosphatase compare
Atu0161 -2.7 -11.1 biopolymer transport protein compare
Atu3706 -2.6 -4.0 D-3-phosphoglycerate dehydrogenase compare
Atu0777 -2.6 -1.2 hypothetical protein compare
Atu0163 -2.6 -5.5 tonB protein compare
Atu4072 -2.5 -1.6 nodulation protein N compare
Atu3730 -2.4 -1.6 hypothetical protein compare
Atu0679 -2.4 -5.1 ATP phosphoribosyltransferase compare
Atu4711 -2.4 -6.8 two component sensor kinase compare
Atu0769 -2.3 -2.1 protoheme IX farnesyltransferase compare
Atu0678 -2.3 -5.1 histidyl-tRNA synthetase compare
Atu1422 -2.2 -8.6 transcriptional regulator, MarR family compare
Atu1030 -2.2 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0537 -2.1 -6.5 histidinol dehydrogenase compare
Atu2555 -2.1 -2.8 L-lysine 2,3-aminomutase compare
Atu4616 -2.1 -1.4 dTDP-4-dehydrorhamnose reductase compare
Atu3755 -2.1 -3.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3707 -2.0 -1.4 phosphoserine aminotransferase compare
Atu2183 -2.0 -5.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0399 -2.0 -4.3 dihydroorotase compare
Atu1205 -1.9 -9.9 threonine dehydratase compare
Atu4317 -1.9 -2.5 TetR family transcriptional regulator compare
Atu0030 -1.9 -1.7 phosphocarrier protein HPr compare
Atu1140 -1.9 -3.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1750 -1.9 -5.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu0189 -1.9 -1.2 ABC transporter, membrane spanning protein (peptide) compare
Atu3353 -1.8 -9.6 mannose-1-phosphate guanylyltransferase compare
Atu1141 -1.8 -4.1 Phosphoribosylglycinamide synthetase compare
Atu4618 -1.8 -9.8 dTDP-rhamnose-3,5-epimerase compare
Atu4166 -1.8 -2.6 UDP-glucose 4-epimerase compare
Atu3183 -1.8 -1.4 hypothetical protein compare
Atu0043 -1.7 -2.0 imidazoleglycerol-phosphate dehydratase compare
Atu3754 -1.7 -5.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1588 -1.7 -3.5 homoserine dehydrogenase compare
Atu4613 -1.7 -10.5 glycosyltransferase compare
Atu4614 -1.7 -4.4 glycosyltransferase compare
Atu1446 -1.7 -1.9 two component response regulator compare
Atu1028 -1.7 -1.6 hypothetical protein compare
Atu3311 -1.7 -11.8 phosphomannose isomerase compare
Atu4617 -1.6 -7.5 dTDP-D-glucose-4,6-dehydratase compare
Atu4610 -1.6 -7.4 sugar nucleotide epimerase/dehydratase compare
Atu0298 -1.5 -5.7 orotidine 5 compare
Atu1646 -1.5 -3.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu0041 -1.5 -1.4 glutamine amidotransferase compare
Atu0017 -1.5 -3.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2522 -1.5 -9.8 agrobacterium chromosomal virulence protein B compare
Atu1845 -1.5 -3.7 phosphoribosylformylglycinamidine synthase I compare
Atu0784 -1.5 -3.1 hypothetical protein compare
Atu0354 -1.5 -1.3 ferric uptake regulator compare
Atu0486 -1.5 -3.4 dihydroorotate dehydrogenase compare
Atu2800 -1.4 -3.2 precorrin-3B C17-methyltransferase compare
Atu0039 -1.4 -0.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu2692 -1.4 -2.5 intracellular septation protein compare
Atu6021 -1.4 -9.3 D-nopaline dehydrogenase compare
Atu4615 -1.3 -6.2 glucose-1-phosphate thymidylyltransferase compare
Atu1182 -1.3 -1.8 hypothetical protein compare
Atu4773 -1.3 -1.3 two component response regulator compare
Atu4502 -1.3 -4.8 cobalamin synthesis protein compare
Atu0690 -1.3 -1.7 hypothetical protein compare
Atu0641 -1.3 -3.4 hypothetical protein compare
Atu0786 -1.3 -4.8 peptidase, family M16 compare
Atu2554 -1.3 -1.6 lysyl-tRNA synthetase compare
Atu1308 -1.3 -3.4 aspartate carbamoyl transferase catalytic subunit compare
Atu4217 -1.3 -0.8 TetR family transcriptional regulator compare
Atu1307 -1.2 -3.7 dihydroorotase compare
Atu0188 -1.2 -0.8 ABC transporter, membrane spanning protein (peptide) compare
Atu1850 -1.2 -2.7 phosphoribosylformylglycinamidine synthetase II compare
Atu2207 -1.2 -1.8 two component sensor kinase compare
Atu1327 -1.2 -3.4 NADH-ubiquinone oxidoreductase compare
Atu4346 -1.2 -3.7 hypothetical protein compare
Atu4161 -1.2 -1.7 hypothetical protein compare
Atu0029 -1.2 -3.4 S-adenosylhomocysteine hydrolase compare
Atu0912 -1.2 -1.3 Na+/H+ antiporter compare
Atu1513 -1.2 -3.7 ABC excinuclease subunit A compare
Atu5125 -1.2 -2.5 GntR family transcriptional regulator compare
Atu2041 -1.2 -2.2 acetyltransferase compare
Atu8167 -1.2 -5.1 putative transmembrane protein compare
Atu4686 -1.1 -2.3 hypothetical protein compare
Atu1354 -1.1 -0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu6019 -1.1 -8.7 D-nopaline dehydrogenase compare
Atu0115 -1.1 -0.9 hypothetical protein compare
Atu1688 -1.1 -4.1 indole-3-glycerol-phosphate synthase compare
Atu0400 -1.1 -2.3 orotate phosphoribosyltransferase compare
Atu0101 -1.1 -3.1 cytochrome c compare
Atu1419 -1.1 -3.6 transcriptional regulator, GntR family compare
Atu1077 -1.1 -2.2 DNA repair protein compare
Atu0038 -1.1 -2.1 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu8094 -1.1 -2.9 hypothetical protein compare
Atu8191 -1.0 -1.6 hypothetical protein compare
Atu3885 -1.0 -4.8 inositol monophosphatase compare
Atu1099 -1.0 -3.6 hypothetical protein compare
Atu1175 -1.0 -1.5 hypothetical protein compare
Atu3598 -1.0 -1.2 thiol:disulfide interchange protein compare
Atu2073 -1.0 -2.7 membrane protein compare
Atu0703 -1.0 -1.9 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu3001 -1.0 -1.4 hypothetical protein compare
Atu1470 -1.0 -0.9 Camphor resistance protein compare
Atu2239 -1.0 -2.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4608 -1.0 -6.4 hypothetical protein compare
Atu1647 -1.0 -3.7 ABC transporter, membrane spanning protein compare
Atu4609 -1.0 -5.5 glycosyltransferase compare
Atu1075 -1.0 -4.3 amidophosphoribosyltransferase compare
Atu2376 -1.0 -2.9 hypothetical protein compare
Atu0647 -1.0 -2.7 phosphoribosylamine--glycine ligase compare
Atu2379 -0.9 -5.0 phosphomannomutase compare
Atu1325 -0.9 -1.1 acetyltransferase compare
Atu2532 -0.9 -3.4 transcriptional regulator, MarR family compare
Atu1110 -0.9 -1.6 cytosol aminopeptidase compare
Atu2684 -0.9 -1.0 hypothetical protein compare
Atu0331 -0.9 -1.2 sigma-54 modulation protein compare
Atu4498 -0.9 -5.0 hypothetical protein compare
Atu1687 -0.9 -3.7 anthranilate phosphoribosyltransferase compare
Atu2650 -0.9 -5.2 glycerol-3-phosphate dehydrogenase compare
Atu0895 -0.9 -0.8 ABC transporter, substrate binding protein compare
Atu2368 -0.9 -1.1 hypothetical protein compare
Atu1163 -0.9 -0.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2347 -0.9 -4.7 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu8168 -0.9 -2.3 hypothetical protein compare
Atu2791 -0.9 -4.2 3-isopropylmalate dehydrogenase compare
Atu1364 -0.9 -2.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2824 -0.9 -1.6 hypothetical protein compare
Atu6098 -0.9 -0.7 transcriptional regulator, HTH family compare
Atu2286 -0.9 -1.3 hypothetical protein compare
Atu1535 -0.9 -2.8 cytochrome c oxidase, FixQ chain compare
Atu2289 -0.9 -6.8 anthranilate synthase component I and II compare
Atu1620 -0.9 -4.8 triosephosphate isomerase compare
Atu3009 -0.9 -1.0 exopolysaccharide production protein compare
Atu1774 -0.9 -1.5 ABC transporter, substrate binding protein (peptide) compare
Atu1467 -0.9 -2.4 hypothetical protein compare
Atu1678 -0.9 -2.5 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1589 -0.9 -2.7 aminotransferase, class I compare
Atu3469 -0.9 -1.6 phosphoglyceromutase compare
Atu1904 -0.9 -1.7 transcriptional regulator compare
Atu6020 -0.9 -3.7 conserved hypothetical protein compare
Atu0876 -0.8 -1.0 superoxide dismutase compare
Atu0499 -0.8 -4.4 hypothetical protein compare
Atu2406 -0.8 -1.7 hypothetical protein compare
Atu2722 -0.8 -3.6 porin compare
Atu0031 -0.8 -0.6 PTS system, IIA component compare
Atu1447 -0.8 -1.1 two component sensor kinase compare
Atu0977 -0.8 -1.6 serine protease DO-like protease compare
Atu2348 -0.8 -4.1 sugar binding protein compare
Atu0269 -0.8 -2.1 exodeoxyribonuclease VII large subunit compare
Atu6165 -0.8 -1.0 hypothetical protein compare
Atu1836 -0.8 -1.2 hypothetical protein compare
Atu1705 -0.8 -2.0 SEC-independent protein translocase protein compare
Atu0422 -0.8 -1.1 ABC transporter, membrane spanning protein compare
Atu3663 -0.8 -0.9 hypothetical protein compare
Atu3218 -0.8 -1.9 hypothetical protein compare
Atu1902 -0.8 -3.1 transketolase compare
Atu1803 -0.8 -2.6 cold shock protein compare
Atu4187 -0.8 -0.8 tRNA-Met compare
Atu4418 -0.8 -2.2 glutaryl-CoA dehydrogenase compare
Atu2184 -0.8 -2.8 transcriptional regulator, AsnC family compare
Atu1260 -0.8 -1.2 hypothetical protein compare
Atu0190 -0.8 -1.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2140 -0.8 -2.1 hypothetical protein compare
Atu0482 -0.8 -3.4 polysaccharide deacetylase compare
Atu5427 -0.8 -2.7 hypothetical protein compare
Atu2718 -0.8 -3.2 homoserine O-succinyltransferase compare
Atu1644 -0.8 -1.3 hypothetical protein compare
Atu2803 -0.8 -2.1 Cobalamin biosynthesis associated protein compare
Atu0149 -0.8 -2.5 enoyl-(acyl-carrier-protein) reductase compare
Atu8041 -0.8 -1.9 hypothetical protein compare
Atu4199 -0.7 -4.3 TetR family transcriptional regulator compare
Atu3299 -0.7 -1.4 hypothetical protein compare
Atu0941 -0.7 -0.6 hypothetical protein compare
Atu1602 -0.7 -2.6 transcriptional activator, Crp family compare
Atu0361 -0.7 -1.0 transcriptional regulator compare
Atu8053 -0.7 -1.5 hypothetical protein compare
Atu2346 -0.7 -4.9 ABC transporter, membrane spanning protein (sugar) compare
Atu1062 -0.7 -1.3 phosphatidylserine synthase compare
Atu1527 -0.7 -2.1 nitrogen fixation protein FixS compare
Atu3006 -0.7 -2.0 hypothetical protein compare
Atu2335 -0.7 -0.9 hypothetical protein compare
Atu2807 -0.7 -3.0 cob(I)alamin adenosyltransferase compare
Atu4540 -0.7 -1.2 protocatechuate 3,4-dioxygenase subunit beta compare
Atu8056 -0.7 -0.9 hypothetical protein compare
Atu8025 -0.7 -1.0 hypothetical protein compare
Atu0051 -0.7 -2.2 two component sensor kinase compare
Atu2237 -0.7 -1.9 cytochrome c1 compare
Atu0153 -0.7 -1.9 transcriptional regulator, Fur family compare
Atu0099 -0.7 -3.9 prephenate dehydratase compare
Atu0460 -0.7 -3.1 hypothetical protein compare
Atu3757 -0.7 -1.7 hypothetical protein compare
Atu1891 -0.7 -1.5 cobalamin biosynthesis protein compare
Atu1619 -0.7 -1.0 protein-export membrane protein SECG compare
Atu2579 -0.7 -2.7 metal dependant beta lactamase protein compare
Atu1356 -0.7 -3.8 hypothetical protein compare
Atu1129 -0.7 -3.2 excinuclease ABC chain C compare
Atu2439 -0.7 -0.4 hypothetical protein compare
Atu1780 -0.7 -3.9 ATP-dependent DNA helicase compare
Atu2036 -0.7 -0.5 acetolactate synthase III, large subunit compare
Atu1468 -0.7 -3.6 hypothetical protein compare
Atu2672 -0.7 -1.8 hypothetical protein compare
Atu3634 -0.7 -2.0 penicillin-binding protein dacf precursor compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in in planta experiments

For in planta Bethi_Library_OD1.0 across organisms