Experiment set24S500 for Agrobacterium fabrum C58

Compare to:

Bethi_Library_OD0.1

200 most important genes:

  gene name fitness t score description  
Atu1417 -4.8 -7.3 enoyl-CoA hydratase compare
Atu0679 -4.2 -6.4 ATP phosphoribosyltransferase compare
Atu2522 -4.1 -15.8 agrobacterium chromosomal virulence protein B compare
Atu3908 -4.1 -13.3 GntR family transcriptional regulator compare
Atu2040 -3.9 -3.8 phosphoserine phosphatase compare
Atu4317 -3.9 -2.6 TetR family transcriptional regulator compare
Atu1422 -3.8 -11.1 transcriptional regulator, MarR family compare
Atu0038 -3.6 -5.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0537 -3.4 -6.0 histidinol dehydrogenase compare
Atu1850 -3.3 -4.2 phosphoribosylformylglycinamidine synthetase II compare
Atu1075 -3.3 -8.5 amidophosphoribosyltransferase compare
Atu1307 -3.3 -9.2 dihydroorotase compare
Atu0678 -3.3 -5.9 histidyl-tRNA synthetase compare
Atu1359 -3.2 -1.6 dnaK deletion suppressor protein compare
Atu4711 -3.2 -7.6 two component sensor kinase compare
Atu1750 -3.2 -6.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu1205 -3.2 -11.8 threonine dehydratase compare
Atu1419 -3.1 -7.7 transcriptional regulator, GntR family compare
Atu0769 -3.1 -2.1 protoheme IX farnesyltransferase compare
Atu1140 -3.1 -6.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu6098 -3.0 -1.5 transcriptional regulator, HTH family compare
Atu0031 -3.0 -1.5 PTS system, IIA component compare
Atu0486 -3.0 -5.3 dihydroorotate dehydrogenase compare
Atu3754 -2.9 -5.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3706 -2.9 -3.9 D-3-phosphoglycerate dehydrogenase compare
Atu1141 -2.9 -7.0 Phosphoribosylglycinamide synthetase compare
Atu0162 -2.8 -9.1 biopolymer transport protein compare
Atu0298 -2.8 -7.3 orotidine 5 compare
Atu0399 -2.7 -4.1 dihydroorotase compare
Atu0043 -2.6 -1.8 imidazoleglycerol-phosphate dehydratase compare
Atu0784 -2.5 -4.1 hypothetical protein compare
Atu2790 -2.5 -2.8 3-isopropylmalate dehydratase, small subunit compare
Atu0030 -2.5 -2.1 phosphocarrier protein HPr compare
Atu1308 -2.5 -7.9 aspartate carbamoyl transferase catalytic subunit compare
Atu0041 -2.5 -1.7 glutamine amidotransferase compare
Atu0163 -2.4 -7.5 tonB protein compare
Atu1588 -2.4 -2.8 homoserine dehydrogenase compare
Atu4166 -2.3 -2.7 UDP-glucose 4-epimerase compare
Atu8167 -2.3 -8.0 putative transmembrane protein compare
Atu1030 -2.3 -1.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4617 -2.3 -11.8 dTDP-D-glucose-4,6-dehydratase compare
Atu2347 -2.3 -11.1 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu2207 -2.3 -3.6 two component sensor kinase compare
Atu0161 -2.2 -10.6 biopolymer transport protein compare
Atu3468 -2.2 -1.5 hypothetical protein compare
Atu0647 -2.2 -5.6 phosphoribosylamine--glycine ligase compare
Atu4773 -2.2 -1.5 two component response regulator compare
Atu3707 -2.1 -1.4 phosphoserine aminotransferase compare
Atu4613 -2.1 -12.8 glycosyltransferase compare
Atu0017 -2.1 -3.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2289 -2.1 -13.9 anthranilate synthase component I and II compare
Atu0331 -2.1 -2.3 sigma-54 modulation protein compare
Atu4618 -2.1 -11.1 dTDP-rhamnose-3,5-epimerase compare
Atu2346 -2.0 -10.3 ABC transporter, membrane spanning protein (sugar) compare
Atu0400 -2.0 -3.9 orotate phosphoribosyltransferase compare
Atu0141 -2.0 -1.8 cytochrome O ubiquinol oxidase subunit I compare
Atu3712 -2.0 -1.8 hypothetical protein compare
Atu1327 -1.9 -3.7 NADH-ubiquinone oxidoreductase compare
Atu0876 -1.9 -1.9 superoxide dismutase compare
Atu1845 -1.9 -3.6 phosphoribosylformylglycinamidine synthase I compare
Atu3353 -1.9 -9.8 mannose-1-phosphate guanylyltransferase compare
Atu8162 -1.9 -2.1 hypothetical protein compare
Atu4615 -1.8 -9.4 glucose-1-phosphate thymidylyltransferase compare
Atu2183 -1.8 -6.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4882 -1.8 -3.2 hypothetical protein compare
Atu1844 -1.8 -2.8 Phosphoribosylformylglycinamidine synthetase compare
Atu0099 -1.8 -8.3 prephenate dehydratase compare
Atu2791 -1.8 -7.1 3-isopropylmalate dehydrogenase compare
Atu3469 -1.7 -2.7 phosphoglyceromutase compare
Atu4677 -1.7 -2.2 hypothetical protein compare
Atu4346 -1.7 -6.0 hypothetical protein compare
Atu3009 -1.7 -1.9 exopolysaccharide production protein compare
Atu0269 -1.7 -3.8 exodeoxyribonuclease VII large subunit compare
Atu2073 -1.7 -4.4 membrane protein compare
Atu3311 -1.7 -12.6 phosphomannose isomerase compare
Atu0361 -1.7 -1.6 transcriptional regulator compare
Atu0419 -1.7 -3.4 two component sensor kinase compare
Atu1077 -1.7 -3.2 DNA repair protein compare
Atu3413 -1.6 -3.8 AsnC family transcriptional regulator compare
Atu4055 -1.6 -6.3 endo-1,3-1,4-beta-glycanase compare
Atu2264 -1.6 -9.3 2-isopropylmalate synthase compare
Atu3885 -1.5 -6.9 inositol monophosphatase compare
Atu4614 -1.5 -6.7 glycosyltransferase compare
Atu6019 -1.5 -10.5 D-nopaline dehydrogenase compare
Atu6021 -1.5 -9.5 D-nopaline dehydrogenase compare
Atu0039 -1.5 -0.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu1688 -1.4 -4.7 indole-3-glycerol-phosphate synthase compare
Atu3012 -1.4 -2.0 hypothetical protein compare
Atu2113 -1.4 -3.3 N-acetylmuramoyl-L-alanine amidase compare
Atu3755 -1.4 -3.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3183 -1.4 -1.4 hypothetical protein compare
Atu3008 -1.4 -1.3 hypothetical protein compare
Atu1687 -1.4 -6.1 anthranilate phosphoribosyltransferase compare
Atu2718 -1.4 -4.5 homoserine O-succinyltransferase compare
Atu4616 -1.3 -1.2 dTDP-4-dehydrorhamnose reductase compare
Atu4609 -1.3 -8.2 glycosyltransferase compare
Atu2709 -1.3 -9.5 3-isopropylmalate dehydratase, large subunit compare
Atu0912 -1.3 -1.4 Na+/H+ antiporter compare
Atu2650 -1.3 -6.6 glycerol-3-phosphate dehydrogenase compare
Atu0319 -1.3 -1.4 ubiquinone biosynthesis protein compare
Atu2521 -1.3 -9.4 Protein regulated by acid pH compare
Atu1620 -1.3 -6.8 triosephosphate isomerase compare
Atu4881 -1.3 -4.6 hypothetical protein compare
Atu0101 -1.3 -3.3 cytochrome c compare
Atu3730 -1.3 -1.1 hypothetical protein compare
Atu0188 -1.3 -0.8 ABC transporter, membrane spanning protein (peptide) compare
Atu3011 -1.2 -3.3 ArsR family transcriptional regulator compare
Atu3598 -1.2 -1.5 thiol:disulfide interchange protein compare
Atu1714 -1.2 -1.4 exonuclease III compare
Atu4018 -1.2 -6.8 two component sensor kinase compare
Atu1570 -1.2 -1.3 hypothetical protein compare
Atu0977 -1.2 -2.1 serine protease DO-like protease compare
Atu0703 -1.2 -2.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu8094 -1.2 -3.5 hypothetical protein compare
Atu4608 -1.2 -7.6 hypothetical protein compare
Atu6020 -1.2 -5.0 conserved hypothetical protein compare
Atu3739 -1.2 -3.1 phosphoglycerate kinase compare
Atu3485 -1.2 -7.6 short chain dehydrogenase compare
Atu1902 -1.2 -4.4 transketolase compare
Atu1803 -1.1 -2.8 cold shock protein compare
Atu0432 -1.1 -6.0 O-succinylhomoserine sulfhydrylase compare
Atu1099 -1.1 -3.9 hypothetical protein compare
Atu1705 -1.1 -3.1 SEC-independent protein translocase protein compare
Atu0050 -1.1 -3.1 two component response regulator compare
Atu3017 -1.1 -1.6 phosphoglyceromutase compare
Atu2270 -1.1 -1.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu1364 -1.1 -3.0 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1354 -1.1 -0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu4610 -1.1 -5.8 sugar nucleotide epimerase/dehydratase compare
Atu4502 -1.1 -4.5 cobalamin synthesis protein compare
Atu4498 -1.1 -5.3 hypothetical protein compare
Atu0894 -1.1 -0.9 ABC transporter, membrane spanning protein compare
Atu2237 -1.1 -3.4 cytochrome c1 compare
Atu0062 -1.0 -6.0 transcriptional regulator, ROK family compare
Atu6150 -1.0 -6.6 P-450 monooxygenase compare
Atu0142 -1.0 -2.4 cytochrome o ubiquinol oxidase subunit II compare
Atu4499 -1.0 -3.8 hypothetical protein compare
Atu8168 -1.0 -1.5 hypothetical protein compare
Atu0401 -1.0 -2.8 fructokinase compare
Atu4889 -1.0 -3.4 hypothetical protein compare
Atu3010 -1.0 -5.4 hypothetical protein compare
Atu3018 -1.0 -3.3 hypothetical protein compare
Atu4896 -1.0 -1.2 acetyltransferase compare
Atu2379 -1.0 -5.2 phosphomannomutase compare
Atu1439 -1.0 -1.0 hypothetical protein compare
Atu1457 -0.9 -2.1 hypothetical protein compare
Atu0029 -0.9 -2.7 S-adenosylhomocysteine hydrolase compare
Atu3496 -0.9 -4.1 hypothetical protein compare
Atu3423 -0.9 -1.9 hypothetical protein compare
Atu4878 -0.9 -3.3 hypothetical protein compare
Atu4892 -0.9 -6.1 hypothetical protein compare
Atu8191 -0.9 -1.5 hypothetical protein compare
Atu4514 -0.9 -3.0 RpiR family transcriptional regulator compare
Atu2682 -0.9 -2.9 hypothetical protein compare
Atu3798 -0.9 -3.9 TetR family transcriptional regulator compare
Atu4217 -0.9 -0.7 TetR family transcriptional regulator compare
Atu4019 -0.9 -4.5 two component response regulator compare
Atu4505 -0.9 -3.7 LacI family transcriptional regulator compare
Atu2200 -0.8 -1.6 cold shock protein compare
Atu0071 -0.8 -3.8 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu4887 -0.8 -3.0 hypothetical protein compare
Atu1589 -0.8 -2.8 aminotransferase, class I compare
Atu3511 -0.8 -1.4 glutaredoxin compare
Atu3572 -0.8 -4.7 transcriptional regulator compare
Atu1447 -0.8 -1.4 two component sensor kinase compare
Atu4888 -0.8 -2.8 hypothetical protein compare
Atu1129 -0.8 -3.6 excinuclease ABC chain C compare
Atu6144 -0.8 -5.4 agrocinopine phosphodiesterase compare
Atu4053 -0.8 -1.3 succinoglycan biosynthesis protein compare
Atu2450 -0.8 -1.6 hypothetical protein compare
Atu4099 -0.8 -3.4 hypothetical protein compare
Atu1028 -0.8 -1.3 hypothetical protein compare
Atu2692 -0.8 -2.2 intracellular septation protein compare
Atu0837 -0.8 -3.2 transcriptional regulator, MarR family compare
Atu3006 -0.8 -2.1 hypothetical protein compare
Atu4685 -0.8 -3.5 LacI family transcriptional regulator compare
Atu2803 -0.8 -2.3 Cobalamin biosynthesis associated protein compare
Atu1527 -0.8 -2.5 nitrogen fixation protein FixS compare
Atu3219 -0.8 -5.5 dihydroxy-acid dehydratase compare
Atu0421 -0.8 -1.0 ABC transporter, membrane spanning protein compare
Atu1468 -0.8 -4.1 hypothetical protein compare
Atu0846 -0.8 -2.2 transcriptional regulator, MarR family compare
Atu2238 -0.7 -2.7 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu6016 -0.7 -5.9 ornithine cyclodeaminase compare
Atu2548 -0.7 -5.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1779 -0.7 -1.5 hypothetical protein compare
Atu2376 -0.7 -1.6 hypothetical protein compare
Atu2439 -0.7 -0.4 hypothetical protein compare
Atu2036 -0.7 -0.5 acetolactate synthase III, large subunit compare
Atu3740 -0.7 -3.8 fructose bisphosphate aldolase compare
Atu1189 -0.7 -2.4 hypothetical protein compare
Atu2155 -0.7 -5.8 methionine synthase compare
Atu8138 -0.7 -0.7 hypothetical protein compare
Atu0499 -0.7 -3.4 hypothetical protein compare
Atu4077 -0.7 -3.2 glycogen branching protein compare
Atu1904 -0.7 -2.2 transcriptional regulator compare
Atu2239 -0.7 -2.0 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4161 -0.7 -1.3 hypothetical protein compare
Atu8018 -0.7 -0.8 hypothetical protein compare
Atu4879 -0.7 -3.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in in planta experiments

For in planta Bethi_Library_OD0.1 across organisms