Experiment set24S487 for Agrobacterium fabrum C58

Compare to:

LB

200 most important genes:

  gene name fitness t score description  
Atu2554 -2.3 -2.2 lysyl-tRNA synthetase compare
Atu3707 -2.2 -1.5 phosphoserine aminotransferase compare
Atu1110 -2.1 -2.7 cytosol aminopeptidase compare
Atu0486 -2.0 -4.7 dihydroorotate dehydrogenase compare
Atu3739 -1.9 -4.0 phosphoglycerate kinase compare
Atu4072 -1.8 -1.6 nodulation protein N compare
Atu3469 -1.7 -2.6 phosphoglyceromutase compare
Atu4317 -1.7 -2.4 TetR family transcriptional regulator compare
Atu0331 -1.6 -2.1 sigma-54 modulation protein compare
Atu0769 -1.6 -1.7 protoheme IX farnesyltransferase compare
Atu1030 -1.5 -1.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1446 -1.5 -1.5 two component response regulator compare
Atu4217 -1.4 -0.9 TetR family transcriptional regulator compare
Atu2207 -1.4 -2.7 two component sensor kinase compare
Atu1364 -1.3 -3.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0912 -1.3 -1.4 Na+/H+ antiporter compare
Atu1503 -1.3 -1.4 hypothetical protein compare
Atu1850 -1.3 -1.6 phosphoribosylformylglycinamidine synthetase II compare
Atu0298 -1.2 -5.1 orotidine 5 compare
Atu6165 -1.2 -1.9 hypothetical protein compare
Atu3011 -1.2 -2.5 ArsR family transcriptional regulator compare
Atu4882 -1.2 -2.5 hypothetical protein compare
Atu2832 -1.2 -2.0 tRNA modification GTPase compare
Atu2807 -1.2 -4.7 cob(I)alamin adenosyltransferase compare
Atu0422 -1.2 -1.8 ABC transporter, membrane spanning protein compare
Atu4469 -1.2 -3.3 iron ABC transporter permease compare
Atu1847 -1.1 -2.0 hypothetical protein compare
Atu4889 -1.1 -4.8 hypothetical protein compare
Atu1760 -1.1 -1.1 hypothetical protein compare
Atu3014 -1.1 -1.4 hypothetical protein compare
Atu1737 -1.1 -1.8 hypothetical protein compare
Atu0322 -1.1 -4.4 enoyl CoA hydratase compare
Atu1356 -1.1 -4.8 hypothetical protein compare
Atu1542 -1.1 -3.6 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1417 -1.1 -5.3 enoyl-CoA hydratase compare
Atu2125 -1.1 -0.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu2532 -1.1 -2.8 transcriptional regulator, MarR family compare
Atu3740 -1.0 -5.6 fructose bisphosphate aldolase compare
Atu3008 -1.0 -1.1 hypothetical protein compare
Atu2772 -1.0 -3.9 Invasion protein A compare
Atu3481 -1.0 -3.8 enoyl-CoA hydratase compare
Atu1163 -1.0 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0050 -1.0 -2.7 two component response regulator compare
Atu3017 -1.0 -1.5 phosphoglyceromutase compare
Atu2692 -1.0 -2.4 intracellular septation protein compare
Atu1891 -1.0 -2.1 cobalamin biosynthesis protein compare
Atu0043 -1.0 -1.5 imidazoleglycerol-phosphate dehydratase compare
Atu5142 -1.0 -2.0 hypothetical protein compare
Atu2352 -0.9 -1.7 hypothetical protein compare
Atu0846 -0.9 -2.9 transcriptional regulator, MarR family compare
Atu1588 -0.9 -2.8 homoserine dehydrogenase compare
Atu2808 -0.9 -4.2 cobyric acid synthase compare
Atu1357 -0.9 -5.8 hypothetical protein compare
Atu0399 -0.9 -2.9 dihydroorotase compare
Atu2115 -0.9 -4.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1103 -0.9 -1.9 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2041 -0.9 -2.1 acetyltransferase compare
Atu1620 -0.9 -5.0 triosephosphate isomerase compare
Atu2442 -0.9 -2.0 hypothetical protein compare
Atu0690 -0.8 -1.2 hypothetical protein compare
Atu0189 -0.8 -0.7 ABC transporter, membrane spanning protein (peptide) compare
Atu2239 -0.8 -2.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu0119 -0.8 -1.1 hypothetical protein compare
Atu1754 -0.8 -1.4 hypothetical protein compare
Atu1075 -0.8 -3.9 amidophosphoribosyltransferase compare
Atu4468 -0.8 -3.2 iron transport ABC transporter permease compare
Atu4711 -0.8 -2.9 two component sensor kinase compare
Atu2258 -0.8 -2.3 acetyltransferase compare
Atu1445 -0.8 -3.3 two component sensor kinase compare
Atu1028 -0.8 -1.3 hypothetical protein compare
Atu2640 -0.8 -1.0 hypothetical protein compare
Atu4418 -0.8 -2.5 glutaryl-CoA dehydrogenase compare
Atu4514 -0.8 -2.5 RpiR family transcriptional regulator compare
Atu8023 -0.8 -1.4 hypothetical protein compare
Atu3727 -0.8 -1.7 hypothetical protein compare
Atu2657 -0.8 -1.5 hypothetical protein compare
Atu8056 -0.7 -1.0 hypothetical protein compare
Atu2831 -0.7 -1.6 glucose inhibited division protein A compare
Atu3478 -0.7 -3.7 3-methylcrotonoyl-CoA carboxylase beta subunit compare
Atu0368 -0.7 -2.1 tRNA pseudouridine synthase I compare
Atu2802 -0.7 -2.6 precorrin-8X methylmutase compare
Atu5163 -0.7 -2.7 type IV secretion protein AvhB2 compare
Atu4881 -0.7 -3.5 hypothetical protein compare
Atu3755 -0.7 -2.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4470 -0.7 -2.8 iron ABC transporter ATPase compare
Atu1189 -0.7 -2.4 hypothetical protein compare
Atu8018 -0.7 -0.8 hypothetical protein compare
Atu3579 -0.7 -2.4 lactoylglutathione lyase compare
Atu8094 -0.7 -2.3 hypothetical protein compare
Atu3468 -0.7 -0.7 hypothetical protein compare
Atu0361 -0.7 -1.0 transcriptional regulator compare
Atu1359 -0.7 -0.7 dnaK deletion suppressor protein compare
Atu2804 -0.7 -4.3 cobaltochelatase subunit compare
Atu4892 -0.7 -5.1 hypothetical protein compare
Atu4471 -0.7 -4.0 ABC transporter substrate-binding protein compare
Atu8202 -0.7 -2.6 hypothetical protein compare
Atu4223 -0.7 -1.2 sarcosine oxidase delta subunit compare
Atu0647 -0.7 -2.6 phosphoribosylamine--glycine ligase compare
Atu2809 -0.7 -3.4 cobalamin biosynthesis protein compare
Atu3754 -0.7 -2.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1522 -0.7 -3.8 transcriptional regulator, LacI family compare
Atu4419 -0.7 -3.9 LysR family transcriptional regulator compare
Atu4878 -0.7 -2.6 hypothetical protein compare
Atu2462 -0.7 -1.7 hypothetical protein compare
Atu3010 -0.7 -3.9 hypothetical protein compare
Atu8099 -0.7 -2.1 hypothetical protein compare
Atu2036 -0.7 -0.6 acetolactate synthase III, large subunit compare
Atu2803 -0.7 -1.9 Cobalamin biosynthesis associated protein compare
Atu2798 -0.7 -1.9 precorrin-6y methyltransferase compare
Atu1846 -0.7 -0.9 hypothetical protein compare
Atu1607 -0.7 -1.5 DNA repair protein compare
Atu0107 -0.7 -1.6 hypothetical protein compare
Atu2796 -0.7 -2.2 precorrin-4 C11-methyltransferase compare
Atu2113 -0.6 -1.6 N-acetylmuramoyl-L-alanine amidase compare
Atu1141 -0.6 -3.0 Phosphoribosylglycinamide synthetase compare
Atu3485 -0.6 -4.6 short chain dehydrogenase compare
Atu3396 -0.6 -3.8 ABC transporter substrate-binding protein compare
Atu1577 -0.6 -2.8 ABC transporter, substrate binding protein (amino acid) compare
Atu3835 -0.6 -2.8 hypothetical protein compare
Atu3476 -0.6 -2.2 AsnC family transcriptional regulator compare
Atu1455 -0.6 -1.3 hypothetical protein compare
Atu3688 -0.6 -2.6 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu5443 -0.6 -2.8 TetR family transcriptional regulator compare
Atu0755 -0.6 -1.5 hypothetical protein compare
Atu0784 -0.6 -1.6 hypothetical protein compare
Atu1766 -0.6 -2.5 hypothetical protein compare
Atu1140 -0.6 -2.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0184 -0.6 -1.5 glucokinase compare
Atu8191 -0.6 -1.2 hypothetical protein compare
Atu1464 -0.6 -3.0 glycine cleavage system T protein, aminomethyltransferase compare
Atu3479 -0.6 -3.3 3-methylcrotonyl-CoA carboxylase subunit alpha compare
Atu4890 -0.6 -1.3 IS426 transposase compare
Atu3593 -0.6 -2.7 hypothetical protein compare
Atu0895 -0.6 -0.7 ABC transporter, substrate binding protein compare
Atu8052 -0.6 -1.1 hypothetical protein compare
Atu2127 -0.6 -3.0 L-carnitine dehydratase compare
Atu2237 -0.6 -2.2 cytochrome c1 compare
Atu4108 -0.6 -3.8 ribonuclease D compare
Atu1463 -0.6 -3.0 glycine cleavage system component H compare
Atu1062 -0.6 -1.2 phosphatidylserine synthase compare
Atu0703 -0.6 -1.0 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu2800 -0.6 -1.7 precorrin-3B C17-methyltransferase compare
Atu1971 -0.6 -2.0 hypothetical protein compare
Atu1694 -0.6 -1.2 hypothetical protein compare
Atu2070 -0.6 -3.0 aminopeptidase P compare
Atu3864 -0.6 -1.9 hypothetical protein compare
Atu2805 -0.6 -2.6 cobalamin synthesis protein compare
Atu2249 -0.6 -0.8 hypothetical protein compare
Atu1462 -0.6 -3.8 glycine cleavage system protein P2 compare
Atu0499 -0.5 -2.9 hypothetical protein compare
Atu3505 -0.5 -3.2 3-hydroxyisobutyryl-CoA hydrolase compare
Atu2128 -0.5 -3.9 acetolactate synthase large subunit compare
Atu4446 -0.5 -3.7 hypothetical protein compare
Atu3001 -0.5 -0.9 hypothetical protein compare
Atu0976 -0.5 -1.4 cycL protein compare
Atu1624 -0.5 -2.9 transcriptional regulator, TetR family compare
Atu1750 -0.5 -2.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu0788 -0.5 -2.1 hypothetical protein compare
Atu0051 -0.5 -1.8 two component sensor kinase compare
Atu1307 -0.5 -2.2 dihydroorotase compare
Atu4888 -0.5 -2.1 hypothetical protein compare
Atu3009 -0.5 -0.8 exopolysaccharide production protein compare
Atu0153 -0.5 -1.9 transcriptional regulator, Fur family compare
Atu2324 -0.5 -2.0 ureidoglycolate hydrolase compare
Atu0400 -0.5 -1.6 orotate phosphoribosyltransferase compare
Atu1518 -0.5 -2.1 transcriptional regulator, Fur family compare
Atu1904 -0.5 -2.0 transcriptional regulator compare
Atu5170 -0.5 -2.3 type IV secretion protein AvhB9 compare
Atu0017 -0.5 -1.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1221 -0.5 -2.5 hypothetical protein compare
Atu1449 -0.5 -1.9 potassium uptake protein compare
Atu0434 -0.5 -1.0 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1573 -0.5 -0.6 hypothetical protein compare
Atu4452 -0.5 -1.9 hypothetical protein compare
Atu0346 -0.5 -1.0 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0971 -0.5 -0.3 two component sensor kinase compare
Atu0269 -0.5 -1.6 exodeoxyribonuclease VII large subunit compare
Atu3474 -0.5 -3.4 acyl-CoA dehydrogenase compare
Atu3815 -0.5 -2.6 GntR family transcriptional regulator compare
Atu4670 -0.5 -2.1 hypothetical protein compare
Atu0031 -0.5 -0.5 PTS system, IIA component compare
Atu3020 -0.5 -3.0 GntR family transcriptional regulator compare
Atu0485 -0.5 -1.7 hypothetical protein compare
Atu1779 -0.5 -1.0 hypothetical protein compare
Atu0168 -0.5 -1.7 guanylate kinase compare
Atu3013 -0.5 -1.9 hypothetical protein compare
Atu2821 -0.5 -1.3 transcriptional regulator, GntR family compare
Atu4527 -0.5 -0.7 hypothetical protein compare
Atu3387 -0.5 -1.2 sigma factor compare
Atu3480 -0.5 -2.5 hydroxymethylglutaryl-CoA lyase compare
Atu0999 -0.5 -1.7 magnesium transport protein compare
Atu0924 -0.5 -1.3 hypothetical protein compare
Atu3733 -0.5 -1.0 hypothetical protein compare
Atu4893 -0.5 -2.0 hypothetical protein compare
Atu2722 -0.5 -2.1 porin compare
Atu3183 -0.5 -0.6 hypothetical protein compare
Atu3912 -0.5 -2.4 hypothetical protein compare
Atu4887 -0.5 -2.1 hypothetical protein compare
Atu0401 -0.5 -2.2 fructokinase compare
Atu1099 -0.5 -1.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb experiments