Experiment set24IT027 for Pseudomonas simiae WCS417

Compare to:

Only library

200 most important genes:

  gene name fitness t score description  
PS417_24705 -3.8 -2.0 D-alanyl-D-alanine carboxypeptidase compare
PS417_06095 -3.3 -1.7 energy transducer TonB compare
PS417_12355 -3.2 -2.5 magnesium chelatase compare
PS417_01130 -3.2 -3.7 L-glyceraldehyde 3-phosphate reductase compare
PS417_27135 -2.7 -0.7 glutamine synthetase compare
PS417_02160 -2.7 -1.4 hypothetical protein compare
PS417_26605 -2.5 -1.3 malonate decarboxylase subunit beta compare
PS417_17215 -2.3 -2.1 peptidylprolyl isomerase compare
PS417_08410 -2.3 -1.6 hypothetical protein compare
PS417_21015 -2.2 -2.7 EstX protein compare
PS417_06245 -2.1 -1.1 zinc metallopeptidase RseP compare
PS417_20855 -2.1 -1.1 hypothetical protein compare
PS417_27795 -2.0 -0.5 orotate phosphoribosyltransferase compare
PS417_19605 -2.0 -1.0 hypothetical protein compare
PS417_19955 -2.0 -1.6 hypothetical protein compare
PS417_02695 -2.0 -1.6 protein hupE compare
PS417_22840 -2.0 -1.2 tRNA-Met compare
PS417_18055 -2.0 -1.1 general secretion pathway protein GspK compare
PS417_07560 -2.0 -0.8 universal stress protein UspA compare
PS417_09420 -2.0 -2.0 LysR family transcriptional regulator compare
PS417_01920 -1.9 -0.6 ATP-dependent protease subunit HslV compare
PS417_10675 -1.8 -0.8 TetR family transcriptional regulator compare
PS417_25710 -1.8 -1.2 indole-3-glycerol-phosphate synthase compare
PS417_20585 -1.8 -5.8 chemotaxis protein compare
PS417_27865 -1.8 -2.7 LysR family transcriptional regulator compare
PS417_02070 -1.8 -0.9 membrane protein compare
PS417_13620 -1.8 -1.4 thermostable hemolysin compare
PS417_26805 -1.7 -1.0 cell division protein FtsE compare
PS417_26755 -1.7 -1.9 nucleoside-triphosphate diphosphatase compare
PS417_21255 -1.7 -2.2 hypothetical protein compare
PS417_14590 -1.7 -1.4 LysR family transcriptional regulator compare
PS417_08685 -1.7 -1.2 flagellar hook-length control protein FliK compare
PS417_13755 -1.6 -2.2 oxidoreductase compare
PS417_22565 -1.6 -0.4 formyltetrahydrofolate deformylase compare
PS417_19610 -1.6 -1.7 molybdenum cofactor sulfurase compare
PS417_08245 -1.6 -0.8 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_21480 -1.6 -0.8 23S rRNA pseudouridylate synthase compare
PS417_04650 -1.5 -0.6 D-alanine--D-alanine ligase compare
PS417_04385 -1.5 -2.0 organic solvent ABC transporter substrate-binding protein compare
PS417_19625 -1.5 -3.0 histidine kinase compare
PS417_04380 -1.5 -0.8 ABC transporter permease compare
PS417_18885 -1.5 -1.7 GntR family transcriptional regulator compare
PS417_12535 -1.5 -2.1 nitrilase compare
PS417_03560 -1.5 -0.7 GTP-binding protein compare
PS417_21850 -1.5 -1.0 LysR family transcriptional regulator compare
PS417_00085 -1.5 -1.8 16S rRNA methyltransferase compare
PS417_26340 -1.5 -3.3 betaine-aldehyde dehydrogenase compare
PS417_08130 -1.5 -1.3 aspartate aminotransferase compare
PS417_08135 -1.4 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_00755 -1.4 -0.6 biofilm PGA synthesis protein PgaD compare
PS417_00355 -1.4 -1.2 metal ABC transporter permease compare
PS417_25225 -1.4 -1.6 MFS transporter compare
PS417_23025 -1.4 -2.4 murein transglycosylase compare
PS417_09930 -1.4 -1.3 hypothetical protein compare
PS417_27300 -1.4 -0.7 cell division protein ZapA compare
PS417_22300 -1.4 -1.1 LTXXQ domain protein compare
PS417_23545 -1.3 -1.1 gamma-glutamyl kinase compare
PS417_12005 -1.3 -2.1 hypothetical protein compare
PS417_22085 -1.3 -1.4 aldehyde dehydrogenase compare
PS417_14260 -1.3 -2.3 phosphate ABC transporter permease compare
PS417_12390 -1.3 -1.4 hypothetical protein compare
PS417_00370 -1.3 -0.6 hypothetical protein compare
PS417_04585 -1.3 -1.1 hypothetical protein compare
PS417_16855 -1.3 -1.2 cation:proton antiporter compare
PS417_11225 -1.3 -3.7 glyoxalase compare
PS417_26120 -1.3 -1.5 hypothetical protein compare
PS417_26085 -1.3 -3.4 peptidase compare
PS417_13895 -1.3 -2.0 chemotaxis protein CheB compare
PS417_20715 -1.3 -2.3 cytochrome Cbb3 compare
PS417_02820 -1.3 -1.9 urea ABC transporter ATP-binding protein compare
PS417_14295 -1.3 -2.0 AraC family transcriptional regulator compare
PS417_15285 -1.2 -0.6 type VI secretion protein compare
PS417_21830 -1.2 -2.9 TetR family transcriptional regulator compare
PS417_03525 -1.2 -1.2 hypothetical protein compare
PS417_28030 -1.2 -1.9 hypothetical protein compare
PS417_12740 -1.2 -2.5 secretion protein HlyD compare
PS417_06505 -1.2 -1.5 membrane protein compare
PS417_04220 -1.2 -1.0 4-carboxymuconolactone decarboxylase compare
PS417_26370 -1.2 -1.3 RNA helicase compare
PS417_23825 -1.2 -2.8 penicillin-binding protein compare
PS417_02415 -1.2 -1.6 phosphoserine phosphatase compare
PS417_23380 -1.2 -1.8 cytochrome o ubiquinol oxidase subunit III compare
PS417_24620 -1.2 -1.3 hypothetical protein compare
PS417_15390 -1.2 -1.7 hypothetical protein compare
PS417_18455 -1.2 -1.1 hypothetical protein compare
PS417_14140 -1.1 -1.2 membrane protein compare
PS417_04365 -1.1 -0.6 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_00685 -1.1 -3.2 hypothetical protein compare
PS417_11125 -1.1 -2.4 hypothetical protein compare
PS417_25175 -1.1 -2.0 hypothetical protein compare
PS417_27110 -1.1 -3.0 spermidine/putrescine ABC transporter permease compare
PS417_06745 -1.1 -1.4 polysaccharide deacetylase compare
PS417_08545 -1.1 -1.1 aromatic ring-opening dioxygenase LigB compare
PS417_21125 -1.1 -3.6 phosphoadenosine phosphosulfate reductase compare
PS417_11715 -1.1 -2.4 chromophore maturation protein PvdO compare
PS417_14805 -1.1 -1.3 AraC family transcriptional regulator compare
PS417_17155 -1.1 -1.9 cytochrome B561 compare
PS417_17000 -1.1 -1.5 MerR family transcriptional regulator compare
PS417_27235 -1.1 -1.5 ribonucleotide reductase compare
PS417_03380 -1.1 -0.6 hypothetical protein compare
PS417_11725 -1.1 -1.8 peptidase M19 compare
PS417_21625 -1.1 -0.5 DNA-binding protein compare
PS417_05905 -1.1 -1.6 hypothetical protein compare
PS417_19590 -1.1 -1.7 enoyl-CoA hydratase compare
PS417_28350 -1.1 -3.1 fatty acid methyltransferase compare
PS417_02255 -1.1 -1.0 lipopolysaccharide kinase compare
PS417_00535 -1.1 -1.2 Holliday junction resolvase compare
PS417_22175 -1.1 -1.4 amino acid transporter LysE compare
PS417_06945 -1.1 -0.6 membrane protein compare
PS417_08350 -1.1 -2.3 preprotein translocase subunit TatD compare
PS417_01270 -1.1 -1.3 iron ABC transporter substrate-binding protein compare
PS417_12870 -1.0 -1.1 enoyl-CoA hydratase compare
PS417_21510 -1.0 -1.1 histidine kinase compare
PS417_15215 -1.0 -0.9 protein activator of alkane oxidation PraA compare
PS417_23715 -1.0 -2.0 cupin compare
PS417_03285 -1.0 -2.7 chromosome partitioning protein compare
PS417_02210 -1.0 -2.6 diguanylate cyclase compare
PS417_21670 -1.0 -1.8 6,7-dimethyl-8-ribityllumazine synthase compare
PS417_15370 -1.0 -1.8 kinase compare
PS417_05535 -1.0 -1.3 Fis family transcriptional regulator compare
PS417_04015 -1.0 -2.1 choline ABC transporter permease compare
PS417_26850 -1.0 -0.6 twin-arginine translocation pathway signal protein compare
PS417_01310 -1.0 -2.2 ATPase compare
PS417_23160 -1.0 -1.5 50S rRNA methyltransferase compare
PS417_06540 -1.0 -1.0 membrane protein compare
PS417_22345 -1.0 -2.3 acetyl-CoA carboxylase compare
PS417_26990 -1.0 -0.3 RNA pyrophosphohydrolase compare
PS417_04965 -1.0 -1.4 hypothetical protein compare
PS417_27870 -1.0 -1.1 ATP-dependent DNA helicase RecG compare
PS417_20340 -1.0 -0.8 hypothetical protein compare
PS417_00075 -1.0 -2.1 hypothetical protein compare
PS417_22250 -1.0 -3.1 pseudouridine synthase compare
PS417_02225 -1.0 -1.5 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_25915 -1.0 -1.6 carbon-nitrogen hydrolase compare
PS417_15465 -1.0 -1.5 carboxynorspermidine decarboxylase compare
PS417_21730 -1.0 -3.2 peptidase M14 compare
PS417_07565 -1.0 -1.5 hypothetical protein compare
PS417_11185 -1.0 -1.2 dimethylallyltransferase compare
PS417_02740 -1.0 -1.5 LysR family transcriptional regulator compare
PS417_07085 -1.0 -2.4 transcriptional regulator compare
PS417_08125 -1.0 -0.2 prephenate dehydratase compare
PS417_03340 -1.0 -2.0 gluconate transporter compare
PS417_14710 -1.0 -0.8 isochorismatase compare
PS417_16665 -0.9 -1.0 hypothetical protein compare
PS417_07420 -0.9 -1.9 restriction endonuclease compare
PS417_03075 -0.9 -3.0 hypothetical protein compare
PS417_21220 -0.9 -2.6 acetyl-CoA acetyltransferase compare
PS417_09300 -0.9 -1.8 peptidylprolyl isomerase compare
PS417_19635 -0.9 -4.9 lipid kinase compare
PS417_07120 -0.9 -2.1 RNA polymerase sigma-H factor compare
PS417_12035 -0.9 -1.3 dihydroxyacetone kinase compare
PS417_18740 -0.9 -2.3 acetyltransferase compare
PS417_27105 -0.9 -2.2 spermidine/putrescine ABC transporter permease compare
PS417_15975 -0.9 -0.9 glutamate carboxypeptidase compare
PS417_15090 -0.9 -0.7 hypothetical protein compare
PS417_10330 -0.9 -2.1 histidine kinase compare
PS417_04020 -0.9 -3.0 glycine/betaine ABC transporter substrate-binding protein compare
PS417_10060 -0.9 -1.1 hypothetical protein compare
PS417_03930 -0.9 -4.0 thymidine phosphorylase compare
PS417_15110 -0.9 -1.3 protein BatD compare
PS417_17580 -0.9 -1.9 citrulline utilization hydrolase (from data) compare
PS417_10995 -0.9 -1.6 GntR family transcriptional regulator compare
PS417_23625 -0.9 -0.8 LysR family transcriptional regulator compare
PS417_07940 -0.9 -1.3 hypothetical protein compare
PS417_24115 -0.9 -1.1 hypothetical protein compare
PS417_06400 -0.9 -2.1 succinylglutamate desuccinylase compare
PS417_22410 -0.9 -2.7 hypothetical protein compare
PS417_12660 -0.9 -1.1 hypothetical protein compare
PS417_23455 -0.9 -2.6 LrgA compare
PS417_01515 -0.9 -2.8 alpha/beta hydrolase compare
PS417_27195 -0.9 -0.7 N-acetylglutamate synthase compare
PS417_13010 -0.9 -0.8 alpha/beta hydrolase compare
PS417_05785 -0.9 -1.4 tail protein compare
PS417_26985 -0.9 -2.7 phosphoenolpyruvate-protein phosphotransferase compare
PS417_06125 -0.9 -1.6 hypothetical protein compare
PS417_18780 -0.9 -0.8 flavin reductase compare
PS417_19615 -0.9 -3.2 chemotaxis protein CheW compare
PS417_20700 -0.9 -4.2 cbb3-type cytochrome c oxidase subunit I compare
PS417_25380 -0.9 -1.0 hypothetical protein compare
PS417_24535 -0.9 -0.9 membrane protein compare
PS417_16860 -0.9 -2.0 diadenosine tetraphosphate hydrolase compare
PS417_26000 -0.9 -3.8 8-amino-7-oxononanoate synthase compare
PS417_26270 -0.9 -1.6 AraC family transcriptional regulator compare
PS417_07190 -0.9 -2.6 MFS transporter compare
PS417_01585 -0.9 -2.4 amino acid ABC transporter substrate-binding protein compare
PS417_00660 -0.8 -1.3 DSBA oxidoreductase compare
PS417_19190 -0.8 -1.2 BolA family transcriptional regulator compare
PS417_21360 -0.8 -0.6 termination factor Rho compare
PS417_24990 -0.8 -2.2 exotoxin compare
PS417_00295 -0.8 -2.4 hypothetical protein compare
PS417_11760 -0.8 -1.1 Fis family transcriptional regulator compare
PS417_07305 -0.8 -1.0 3-beta hydroxysteroid dehydrogenase compare
PS417_04300 -0.8 -2.4 FagA protein compare
PS417_08925 -0.8 -1.9 membrane protein compare
PS417_08620 -0.8 -0.5 hypothetical protein compare
PS417_12335 -0.8 -1.7 cobalt transporter compare
PS417_06700 -0.8 -1.7 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) (from data) compare
PS417_04180 -0.8 -1.5 GntR family transcriptional regulator compare
PS417_11405 -0.8 -1.9 precorrin 6A synthase compare
PS417_03815 -0.8 -0.9 DNA transporter compare


Specific Phenotypes

None in this experiment

For Pseudomonas simiae WCS417 in nophagecontrol experiments

For nophagecontrol Only library across organisms