Experiment set23S653 for Agrobacterium fabrum C58

Compare to:

P1L4

200 most important genes:

  gene name fitness t score description  
Atu0153 -4.6 -4.4 transcriptional regulator, Fur family compare
Atu1417 -4.3 -8.3 enoyl-CoA hydratase compare
Atu0162 -4.1 -7.8 biopolymer transport protein compare
Atu1422 -4.0 -9.5 transcriptional regulator, MarR family compare
Atu3908 -3.9 -9.8 GntR family transcriptional regulator compare
Atu1140 -3.8 -5.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2522 -3.8 -14.2 agrobacterium chromosomal virulence protein B compare
Atu1845 -3.8 -4.5 phosphoribosylformylglycinamidine synthase I compare
Atu0163 -3.6 -6.9 tonB protein compare
Atu0161 -3.6 -10.1 biopolymer transport protein compare
Atu4711 -3.6 -7.5 two component sensor kinase compare
Atu1359 -3.5 -1.7 dnaK deletion suppressor protein compare
Atu4616 -3.3 -2.2 dTDP-4-dehydrorhamnose reductase compare
Atu1075 -3.0 -5.6 amidophosphoribosyltransferase compare
Atu0678 -2.8 -4.1 histidyl-tRNA synthetase compare
Atu0050 -2.7 -4.1 two component response regulator compare
Atu1844 -2.7 -1.8 Phosphoribosylformylglycinamidine synthetase compare
Atu1030 -2.7 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0537 -2.7 -3.2 histidinol dehydrogenase compare
Atu1750 -2.6 -4.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu0038 -2.5 -3.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1419 -2.5 -7.1 transcriptional regulator, GntR family compare
Atu3598 -2.5 -2.4 thiol:disulfide interchange protein compare
Atu0030 -2.4 -1.6 phosphocarrier protein HPr compare
Atu0486 -2.4 -3.3 dihydroorotate dehydrogenase compare
Atu0043 -2.3 -1.6 imidazoleglycerol-phosphate dehydratase compare
Atu1683 -2.3 -1.5 hypothetical protein compare
Atu1850 -2.3 -3.3 phosphoribosylformylglycinamidine synthetase II compare
Atu3353 -2.2 -11.9 mannose-1-phosphate guanylyltransferase compare
Atu3755 -2.2 -3.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1307 -2.2 -3.6 dihydroorotase compare
Atu0422 -2.2 -2.5 ABC transporter, membrane spanning protein compare
Atu3754 -2.1 -4.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0784 -2.1 -4.2 hypothetical protein compare
Atu8167 -2.1 -7.2 putative transmembrane protein compare
Atu0647 -2.0 -3.5 phosphoribosylamine--glycine ligase compare
Atu1141 -2.0 -5.0 Phosphoribosylglycinamide synthetase compare
Atu0400 -1.9 -2.5 orotate phosphoribosyltransferase compare
Atu4613 -1.9 -13.0 glycosyltransferase compare
Atu4614 -1.9 -8.0 glycosyltransferase compare
Atu2017 -1.9 -1.6 hypothetical protein compare
Atu2346 -1.9 -8.7 ABC transporter, membrane spanning protein (sugar) compare
Atu4618 -1.8 -10.8 dTDP-rhamnose-3,5-epimerase compare
Atu4617 -1.8 -7.7 dTDP-D-glucose-4,6-dehydratase compare
Atu4166 -1.8 -3.3 UDP-glucose 4-epimerase compare
Atu8025 -1.8 -1.7 hypothetical protein compare
Atu3311 -1.8 -13.1 phosphomannose isomerase compare
Atu4773 -1.8 -2.0 two component response regulator compare
Atu2692 -1.8 -2.7 intracellular septation protein compare
Atu2347 -1.8 -6.5 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu2183 -1.7 -7.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0842 -1.7 -2.5 hypothetical protein compare
Atu0679 -1.7 -2.8 ATP phosphoribosyltransferase compare
Atu2368 -1.7 -1.8 hypothetical protein compare
Atu1952 -1.7 -1.9 hypothetical protein compare
Atu0361 -1.7 -1.1 transcriptional regulator compare
Atu3763 -1.7 -1.1 hypothetical protein compare
Atu1308 -1.6 -3.8 aspartate carbamoyl transferase catalytic subunit compare
Atu1535 -1.6 -3.0 cytochrome c oxidase, FixQ chain compare
Atu4055 -1.6 -6.1 endo-1,3-1,4-beta-glycanase compare
Atu1619 -1.6 -3.3 protein-export membrane protein SECG compare
Atu0354 -1.6 -1.7 ferric uptake regulator compare
Atu0298 -1.6 -3.2 orotidine 5 compare
Atu3469 -1.6 -2.3 phosphoglyceromutase compare
Atu2521 -1.6 -8.5 Protein regulated by acid pH compare
Atu2433 -1.5 -1.4 hypothetical protein compare
Atu1327 -1.5 -2.8 NADH-ubiquinone oxidoreductase compare
Atu3012 -1.5 -2.5 hypothetical protein compare
Atu6165 -1.5 -1.3 hypothetical protein compare
Atu1163 -1.5 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0977 -1.4 -2.6 serine protease DO-like protease compare
Atu0401 -1.4 -5.5 fructokinase compare
Atu8162 -1.4 -1.6 hypothetical protein compare
Atu0269 -1.4 -3.2 exodeoxyribonuclease VII large subunit compare
Atu0912 -1.4 -1.3 Na+/H+ antiporter compare
Atu4498 -1.4 -5.0 hypothetical protein compare
Atu0062 -1.4 -5.7 transcriptional regulator, ROK family compare
Atu1364 -1.4 -3.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4610 -1.4 -7.3 sugar nucleotide epimerase/dehydratase compare
Atu4232 -1.4 -3.8 GntR family transcriptional regulator compare
Atu2379 -1.4 -7.3 phosphomannomutase compare
Atu4685 -1.4 -6.1 LacI family transcriptional regulator compare
Atu0115 -1.4 -1.1 hypothetical protein compare
Atu0051 -1.4 -2.9 two component sensor kinase compare
Atu4615 -1.3 -6.2 glucose-1-phosphate thymidylyltransferase compare
Atu2264 -1.3 -7.8 2-isopropylmalate synthase compare
Atu6019 -1.3 -8.9 D-nopaline dehydrogenase compare
Atu1714 -1.3 -1.0 exonuclease III compare
Atu4502 -1.3 -4.5 cobalamin synthesis protein compare
Atu2217 -1.3 -4.1 hypothetical protein compare
Atu2040 -1.3 -2.8 phosphoserine phosphatase compare
Atu0399 -1.3 -1.5 dihydroorotase compare
Atu0971 -1.3 -0.9 two component sensor kinase compare
Atu2289 -1.3 -6.1 anthranilate synthase component I and II compare
Atu1588 -1.3 -2.1 homoserine dehydrogenase compare
Atu0837 -1.3 -3.3 transcriptional regulator, MarR family compare
Atu2207 -1.3 -2.6 two component sensor kinase compare
Atu3707 -1.3 -0.8 phosphoserine aminotransferase compare
Atu1354 -1.3 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1446 -1.2 -1.6 two component response regulator compare
Atu3468 -1.2 -0.9 hypothetical protein compare
Atu4162 -1.2 -4.9 two-component response regulator compare
Atu6021 -1.2 -6.8 D-nopaline dehydrogenase compare
Atu4317 -1.2 -1.3 TetR family transcriptional regulator compare
Atu6020 -1.2 -2.5 conserved hypothetical protein compare
Atu0039 -1.2 -0.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu0119 -1.2 -1.4 hypothetical protein compare
Atu0894 -1.2 -1.1 ABC transporter, membrane spanning protein compare
Atu4608 -1.2 -8.0 hypothetical protein compare
Atu0041 -1.2 -0.8 glutamine amidotransferase compare
Atu4451 -1.2 -6.0 mannitol 2-dehydrogenase compare
Atu1620 -1.2 -6.0 triosephosphate isomerase compare
Atu3963 -1.2 -5.2 GntR family transcriptional regulator compare
Atu4609 -1.2 -7.2 glycosyltransferase compare
Atu5125 -1.2 -1.9 GntR family transcriptional regulator compare
Atu0432 -1.1 -5.4 O-succinylhomoserine sulfhydrylase compare
Atu0565 -1.1 -3.2 hypothetical protein compare
Atu8191 -1.1 -1.3 hypothetical protein compare
Atu1534 -1.1 -4.6 cytochrome-c oxidase, FixP chain compare
Atu8018 -1.1 -1.0 hypothetical protein compare
Atu0184 -1.1 -2.2 glucokinase compare
Atu0141 -1.1 -1.0 cytochrome O ubiquinol oxidase subunit I compare
Atu0769 -1.1 -0.7 protoheme IX farnesyltransferase compare
Atu0795 -1.1 -2.0 hypothetical protein compare
Atu3759 -1.1 -1.3 hypothetical protein compare
Atu2555 -1.1 -2.1 L-lysine 2,3-aminomutase compare
Atu2554 -1.1 -1.2 lysyl-tRNA synthetase compare
Atu2709 -1.1 -7.4 3-isopropylmalate dehydratase, large subunit compare
Atu1099 -1.1 -4.3 hypothetical protein compare
Atu2824 -1.1 -1.5 hypothetical protein compare
Atu8036 -1.1 -2.7 protein YBGT-like protein compare
Atu3009 -1.1 -1.2 exopolysaccharide production protein compare
Atu8095 -1.1 -4.6 hypothetical protein compare
Atu0999 -1.1 -2.1 magnesium transport protein compare
Atu2640 -1.1 -1.4 hypothetical protein compare
Atu1705 -1.1 -2.5 SEC-independent protein translocase protein compare
Atu1530 -1.0 -5.9 nitrogen fixation protein FixG compare
Atu3719 -1.0 -5.1 MutT/nudix family protein compare
Atu6131 -1.0 -2.5 TraR Antiactivator compare
Atu2439 -1.0 -0.6 hypothetical protein compare
Atu2052 -1.0 -1.8 hypothetical protein compare
Atu6144 -1.0 -6.5 agrocinopine phosphodiesterase compare
Atu2718 -1.0 -4.1 homoserine O-succinyltransferase compare
Atu3750 -1.0 -1.8 thiamine-phosphate pyrophosphorylase compare
Atu0979 -1.0 -2.8 two component sensor kinase compare
Atu4499 -1.0 -3.0 hypothetical protein compare
Atu3485 -1.0 -5.9 short chain dehydrogenase compare
Atu0099 -1.0 -5.3 prephenate dehydratase compare
Atu2791 -1.0 -4.3 3-isopropylmalate dehydrogenase compare
Atu1513 -1.0 -3.2 ABC excinuclease subunit A compare
Atu0677 -1.0 -2.0 hypothetical protein compare
Atu3219 -1.0 -6.0 dihydroxy-acid dehydratase compare
Atu0687 -1.0 -1.9 hypothetical protein compare
Atu3740 -1.0 -5.7 fructose bisphosphate aldolase compare
Atu8118 -1.0 -4.0 putative universal stress protein compare
Atu1793 -1.0 -3.6 phosphatidylcholine synthase compare
Atu2790 -1.0 -1.6 3-isopropylmalate dehydratase, small subunit compare
Atu6150 -1.0 -5.9 P-450 monooxygenase compare
Atu1902 -1.0 -3.5 transketolase compare
Atu0205 -0.9 -5.1 methylmalonate-semialdehyde dehydrogenase compare
Atu1537 -0.9 -5.1 cytochrome-c oxidase, FixN chain compare
Atu1602 -0.9 -4.4 transcriptional activator, Crp family compare
Atu6017 -0.9 -6.8 NAD/NADP octopine/nopaline dehydrogenase compare
Atu0536 -0.9 -4.2 hypothetical protein compare
Atu1904 -0.9 -3.1 transcriptional regulator compare
Atu5164 -0.9 -0.8 type IV secretion protein AvhB3 compare
Atu4148 -0.9 -3.6 UDP-glucuronic acid epimerase compare
Atu2683 -0.9 -1.5 hypothetical protein compare
Atu0355 -0.9 -3.7 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu3572 -0.9 -3.6 transcriptional regulator compare
Atu1223 -0.9 -0.5 hypothetical protein compare
Atu4217 -0.9 -0.6 TetR family transcriptional regulator compare
Atu0368 -0.9 -2.0 tRNA pseudouridine synthase I compare
Atu1205 -0.9 -4.0 threonine dehydratase compare
Atu0029 -0.9 -2.3 S-adenosylhomocysteine hydrolase compare
Atu0328 -0.9 -3.9 heat-inducible transcription repressor compare
Atu6195 -0.9 -3.0 conserved hypothetical protein compare
Atu1077 -0.9 -1.9 DNA repair protein compare
Atu1232 -0.9 -1.4 hypothetical protein compare
Atu0339 -0.9 -2.1 hypothetical protein compare
Atu3999 -0.9 -1.6 dithiobiotin synthetase compare
Atu4446 -0.9 -4.1 hypothetical protein compare
Atu1527 -0.9 -3.0 nitrogen fixation protein FixS compare
Atu1589 -0.9 -2.6 aminotransferase, class I compare
Atu1464 -0.9 -3.6 glycine cleavage system T protein, aminomethyltransferase compare
Atu0142 -0.9 -1.6 cytochrome o ubiquinol oxidase subunit II compare
Atu4346 -0.8 -3.8 hypothetical protein compare
Atu2590 -0.8 -4.9 hypothetical protein compare
Atu3885 -0.8 -3.3 inositol monophosphatase compare
Atu2650 -0.8 -4.1 glycerol-3-phosphate dehydrogenase compare
Atu1810 -0.8 -0.5 hypothetical protein compare
Atu6016 -0.8 -5.9 ornithine cyclodeaminase compare
Atu1129 -0.8 -3.3 excinuclease ABC chain C compare
Atu2239 -0.8 -1.9 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu1891 -0.8 -2.0 cobalamin biosynthesis protein compare
Atu6018 -0.8 -5.5 arginase compare
Atu1592 -0.8 -3.6 hypothetical protein compare
Atu0888 -0.8 -3.3 transcriptional regulator, MerR family compare
Atu2584 -0.8 -2.9 hypothetical protein compare
Atu2585 -0.8 -2.9 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For no phage Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct in Agrobacterium fabrum C58

For no phage Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct across organisms