Experiment set22S225 for Agrobacterium fabrum C58

Compare to:

Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0

Genes with specific phenotypes:

  gene name fitness t score description  
Atu6144 -2.7 -15.8 agrocinopine phosphodiesterase compare
Atu4499 -2.0 -7.4 hypothetical protein compare
Atu6016 -1.8 -12.6 ornithine cyclodeaminase compare
Atu0071 -1.6 -6.7 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu6017 -1.5 -11.8 NAD/NADP octopine/nopaline dehydrogenase compare
Atu4498 -1.5 -7.5 hypothetical protein compare
Atu0070 -1.5 -6.3 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu6025 -1.4 -10.7 ABC transporter, membrane spanning protein (nopaline) compare
Atu6141 -1.4 -9.9 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) compare
Atu6018 -1.4 -10.4 arginase compare
Atu6139 -1.4 -11.4 ABC transporter, substrate binding protein (agrocinopines A and B) compare
Atu6150 -1.4 -8.4 P-450 monooxygenase compare
Atu6027 -1.4 -7.7 ABC transporter, substrate binding protein (nopaline) compare
Atu6143 -1.4 -9.5 ABC transporter, membrane spanning protein (agrocinopine) compare
Atu6026 -1.4 -6.2 ABC transporter, membrane spanning protein (nopaline) compare
Atu6142 -1.4 -10.1 ABC transporter, membrane spanning protein (agrocinopine) compare
Atu6140 -1.3 -9.1 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) compare
Atu6028 -1.3 -7.0 ABC transporter, nucleotide binding/ATPase protein (nopaline) compare
Atu6029 -1.2 -8.6 transcriptional regulator, LysR family for nopaline metabolism compare
Atu6145 -1.1 -8.0 arabinose phosphate phosphatase compare
Atu4007 -1.1 -7.1 arginase compare
Atu2348 +1.4 6.7 sugar binding protein compare
Atu6164 +1.5 9.5 trans-zeatin secretion protein compare
Atu5122 +1.5 10.4 3-ketoacyl-ACP reductase compare
Atu6178 +1.5 12.5 two component response regulator compare
Atu6166 +1.7 15.0 two component sensor kinase compare


Specific phenotypes for in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 across organisms