Experiment set22S224 for Agrobacterium fabrum C58

Compare to:

Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0

Genes with specific phenotypes:

  gene name fitness t score description  
Atu6144 -2.1 -13.1 agrocinopine phosphodiesterase compare
Atu4498 -1.7 -6.6 hypothetical protein compare
Atu6016 -1.7 -12.6 ornithine cyclodeaminase compare
Atu6018 -1.6 -10.5 arginase compare
Atu6017 -1.5 -11.7 NAD/NADP octopine/nopaline dehydrogenase compare
Atu6028 -1.5 -8.1 ABC transporter, nucleotide binding/ATPase protein (nopaline) compare
Atu6026 -1.5 -6.6 ABC transporter, membrane spanning protein (nopaline) compare
Atu6143 -1.4 -9.2 ABC transporter, membrane spanning protein (agrocinopine) compare
Atu6139 -1.3 -10.6 ABC transporter, substrate binding protein (agrocinopines A and B) compare
Atu6027 -1.3 -6.3 ABC transporter, substrate binding protein (nopaline) compare
Atu6025 -1.2 -9.3 ABC transporter, membrane spanning protein (nopaline) compare
Atu6029 -1.2 -9.3 transcriptional regulator, LysR family for nopaline metabolism compare
Atu6150 -1.2 -7.4 P-450 monooxygenase compare
Atu6140 -1.1 -8.3 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) compare
Atu6141 -1.1 -7.9 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) compare
Atu6142 -1.1 -8.1 ABC transporter, membrane spanning protein (agrocinopine) compare
Atu6166 +1.3 11.5 two component sensor kinase compare


Specific phenotypes for in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 across organisms