Experiment set22S223 for Agrobacterium fabrum C58

Compare to:

Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0

Genes with specific phenotypes:

  gene name fitness t score description  
Atu6144 -2.4 -13.3 agrocinopine phosphodiesterase compare
Atu4018 -2.0 -9.1 two component sensor kinase compare
Atu4499 -2.0 -6.2 hypothetical protein compare
Atu6150 -1.7 -11.0 P-450 monooxygenase compare
Atu6028 -1.7 -9.2 ABC transporter, nucleotide binding/ATPase protein (nopaline) compare
Atu6016 -1.6 -11.4 ornithine cyclodeaminase compare
Atu6027 -1.5 -7.4 ABC transporter, substrate binding protein (nopaline) compare
Atu6017 -1.5 -10.7 NAD/NADP octopine/nopaline dehydrogenase compare
Atu6018 -1.4 -9.9 arginase compare
Atu6029 -1.3 -9.8 transcriptional regulator, LysR family for nopaline metabolism compare
Atu6140 -1.3 -9.3 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) compare
Atu6141 -1.3 -8.2 ABC transporter, nucleotide binding/ATPase protein (agrocinopine) compare
Atu6026 -1.3 -7.1 ABC transporter, membrane spanning protein (nopaline) compare
Atu6025 -1.2 -9.5 ABC transporter, membrane spanning protein (nopaline) compare
Atu6139 -1.2 -8.6 ABC transporter, substrate binding protein (agrocinopines A and B) compare
Atu6142 -1.1 -7.9 ABC transporter, membrane spanning protein (agrocinopine) compare
Atu6143 -1.1 -6.6 ABC transporter, membrane spanning protein (agrocinopine) compare
Atu6168 +1.1 6.9 component of type IV secretion system, pilin subunit compare
Atu6164 +1.4 9.3 trans-zeatin secretion protein compare
Atu6178 +1.6 11.7 two component response regulator compare
Atu2348 +1.7 10.3 sugar binding protein compare
Atu6166 +1.9 16.1 two component sensor kinase compare


Specific phenotypes for in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 across organisms