Experiment set22S199 for Agrobacterium fabrum C58

Compare to:

Benthi_leaf_LB

200 most important genes:

  gene name fitness t score description  
Atu1163 -2.8 -1.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu8087 -2.3 -1.5 putative peptidoglycan binding protein compare
Atu0999 -2.2 -6.0 magnesium transport protein compare
Atu2125 -1.9 -1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu2439 -1.8 -1.4 hypothetical protein compare
Atu1810 -1.6 -0.9 hypothetical protein compare
Atu0040 -1.6 -0.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4217 -1.6 -1.8 TetR family transcriptional regulator compare
Atu0533 -1.6 -3.2 putative inhibitor of septum formation compare
Atu3598 -1.6 -3.0 thiol:disulfide interchange protein compare
Atu4317 -1.5 -3.4 TetR family transcriptional regulator compare
Atu1774 -1.5 -4.7 ABC transporter, substrate binding protein (peptide) compare
Atu2217 -1.4 -5.0 hypothetical protein compare
Atu0190 -1.4 -3.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2040 -1.4 -4.7 phosphoserine phosphatase compare
Atu5540 -1.4 -1.9 hypothetical protein compare
Atu0142 -1.4 -4.5 cytochrome o ubiquinol oxidase subunit II compare
Atu1354 -1.4 -0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1356 -1.3 -7.0 hypothetical protein compare
Atu0769 -1.3 -1.7 protoheme IX farnesyltransferase compare
Atu1602 -1.3 -5.8 transcriptional activator, Crp family compare
Atu2083 -1.2 -3.3 DNA repair protein RecN compare
Atu0331 -1.2 -2.6 sigma-54 modulation protein compare
Atu0925 -1.2 -4.5 hypothetical protein compare
Atu1793 -1.2 -7.7 phosphatidylcholine synthase compare
Atu4072 -1.2 -1.2 nodulation protein N compare
Atu0977 -1.2 -3.3 serine protease DO-like protease compare
Atu0086 -1.1 -0.9 ribosome-binding factor A compare
Atu0189 -1.1 -1.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0784 -1.1 -3.9 hypothetical protein compare
Atu0030 -1.1 -1.8 phosphocarrier protein HPr compare
Atu1619 -1.1 -2.8 protein-export membrane protein SECG compare
Atu1739 -1.1 -3.7 permease compare
Atu0041 -1.1 -1.0 glutamine amidotransferase compare
Atu0269 -1.1 -3.5 exodeoxyribonuclease VII large subunit compare
Atu0399 -1.1 -4.1 dihydroorotase compare
Atu1028 -1.0 -1.7 hypothetical protein compare
Atu1232 -1.0 -2.1 hypothetical protein compare
Atu1357 -1.0 -6.6 hypothetical protein compare
Atu0051 -1.0 -3.4 two component sensor kinase compare
Atu0876 -0.9 -0.9 superoxide dismutase compare
Atu0031 -0.9 -1.0 PTS system, IIA component compare
Atu2036 -0.9 -1.7 acetolactate synthase III, large subunit compare
Atu1513 -0.9 -3.9 ABC excinuclease subunit A compare
Atu0924 -0.9 -2.7 hypothetical protein compare
Atu4840 -0.9 -3.5 hypothetical protein compare
Atu8118 -0.9 -4.7 putative universal stress protein compare
Atu1535 -0.9 -2.1 cytochrome c oxidase, FixQ chain compare
Atu0050 -0.9 -3.3 two component response regulator compare
Atu2633 -0.9 -1.9 RhtB family transporter compare
Atu0043 -0.9 -1.1 imidazoleglycerol-phosphate dehydratase compare
Atu1714 -0.8 -1.3 exonuclease III compare
Atu0141 -0.8 -1.2 cytochrome O ubiquinol oxidase subunit I compare
Atu2335 -0.8 -1.3 hypothetical protein compare
Atu3518 -0.8 -4.7 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu1683 -0.8 -1.4 hypothetical protein compare
Atu2710 -0.8 -1.8 hypothetical protein compare
Atu1254 -0.8 -1.8 transcriptional regulator, ArsR family compare
Atu3706 -0.8 -3.3 D-3-phosphoglycerate dehydrogenase compare
Atu4618 -0.8 -4.9 dTDP-rhamnose-3,5-epimerase compare
Atu2832 -0.8 -1.8 tRNA modification GTPase compare
Atu1529 -0.8 -3.9 nitrogen fixation protein FixH compare
Atu1566 -0.8 -1.4 hypothetical protein compare
Atu2684 -0.7 -1.2 hypothetical protein compare
Atu2304 -0.7 -4.9 bacteroid development protein compare
Atu3008 -0.7 -0.8 hypothetical protein compare
Atu0678 -0.7 -2.5 histidyl-tRNA synthetase compare
Atu2067 -0.7 -0.8 hypothetical protein compare
Atu0070 -0.7 -4.6 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu0353 -0.7 -4.3 acetyltransferase compare
Atu2616 -0.7 -1.4 hypothetical protein compare
Atu3763 -0.7 -0.7 hypothetical protein compare
Atu0340 -0.7 -1.4 SAM dependent methyltransferase compare
Atu0354 -0.7 -1.5 ferric uptake regulator compare
Atu0893 -0.7 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu2073 -0.7 -2.4 membrane protein compare
Atu1327 -0.7 -3.3 NADH-ubiquinone oxidoreductase compare
Atu0508 -0.7 -1.9 PH Adaption potassium efflux system compare
Atu2554 -0.7 -1.5 lysyl-tRNA synthetase compare
Atu3663 -0.7 -1.1 hypothetical protein compare
Atu1074 -0.7 -4.2 NAD/NADP dependent oxidoreductase compare
Atu1528 -0.7 -5.0 nitrogen fixation protein FixI compare
Atu2615 -0.7 -1.5 hypothetical protein compare
Atu5173 -0.7 -2.4 dehydrogenase compare
Atu0566 -0.7 -0.9 hypothetical protein compare
Atu8167 -0.7 -5.1 putative transmembrane protein compare
Atu2238 -0.7 -3.4 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu3469 -0.7 -1.6 phosphoglyceromutase compare
Atu2189 -0.7 -2.7 hypothetical protein compare
Atu0071 -0.7 -3.9 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu0184 -0.7 -2.7 glucokinase compare
Atu2746 -0.7 -1.7 hypothetical protein compare
Atu1308 -0.7 -4.1 aspartate carbamoyl transferase catalytic subunit compare
Atu3750 -0.7 -1.8 thiamine-phosphate pyrophosphorylase compare
Atu1803 -0.7 -2.8 cold shock protein compare
Atu8052 -0.7 -1.5 hypothetical protein compare
Atu0421 -0.7 -0.9 ABC transporter, membrane spanning protein compare
Atu0966 -0.7 -0.9 hypothetical protein compare
Atu2824 -0.6 -1.9 hypothetical protein compare
Atu1359 -0.6 -0.8 dnaK deletion suppressor protein compare
Atu1323 -0.6 -1.9 hypothetical protein compare
Atu2682 -0.6 -2.5 hypothetical protein compare
Atu1536 -0.6 -3.6 cytochrome C oxidase, FixO chain compare
Atu1364 -0.6 -2.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2555 -0.6 -1.4 L-lysine 2,3-aminomutase compare
Atu3697 -0.6 -1.9 ATP-dependent protease LA 2 compare
Atu3634 -0.6 -3.3 penicillin-binding protein dacf precursor compare
Atu3609 -0.6 -2.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu0422 -0.6 -1.3 ABC transporter, membrane spanning protein compare
Atu0039 -0.6 -0.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu2722 -0.6 -2.9 porin compare
Atu2052 -0.6 -1.8 hypothetical protein compare
Atu3519 -0.6 -2.7 peptidyl-prolyl cis-trans isomerase compare
Atu2578 -0.6 -2.4 cAMP-dependent protein kinase regulatory subunit compare
Atu0972 -0.6 -1.2 lipA protein compare
Atu4838 -0.6 -2.6 outer membrane lipoprotein compare
Atu5145 -0.6 -2.0 acetyltransferase compare
Atu0499 -0.6 -2.8 hypothetical protein compare
Atu0995 -0.6 -3.3 hypothetical protein compare
Atu3517 -0.6 -3.6 acetyltransferase compare
Atu1844 -0.6 -1.8 Phosphoribosylformylglycinamidine synthetase compare
Atu0895 -0.6 -1.0 ABC transporter, substrate binding protein compare
Atu1741 -0.6 -2.6 hypothetical protein compare
Atu1446 -0.6 -1.2 two component response regulator compare
Atu0677 -0.6 -1.3 hypothetical protein compare
Atu8054 -0.6 -0.8 hypothetical protein compare
Atu1173 -0.6 -3.6 MFS permease compare
Atu1285 -0.5 -3.0 metal dependent hydrolase compare
Atu6098 -0.5 -0.7 transcriptional regulator, HTH family compare
Atu2787 -0.5 -0.9 hypothetical protein compare
Atu4614 -0.5 -3.1 glycosyltransferase compare
Atu0477 -0.5 -0.7 hypothetical protein compare
Atu3886 -0.5 -3.3 lysophospholipase compare
Atu1468 -0.5 -3.3 hypothetical protein compare
Atu1307 -0.5 -2.2 dihydroorotase compare
Atu3727 -0.5 -1.8 hypothetical protein compare
Atu4792 -0.5 -1.1 hypothetical protein compare
Atu0480 -0.5 -4.1 polysaccharide biosynthesis protein compare
Atu4711 -0.5 -1.9 two component sensor kinase compare
Atu0193 -0.5 -2.2 glutamine synthetase compare
Atu2043 -0.5 -3.1 htrA family protein compare
Atu1447 -0.5 -0.9 two component sensor kinase compare
Atu0401 -0.5 -3.1 fructokinase compare
Atu0971 -0.5 -0.8 two component sensor kinase compare
Atu3295 -0.5 -1.6 hypothetical protein compare
Atu0153 -0.5 -1.8 transcriptional regulator, Fur family compare
Atu0931 -0.5 -3.7 penicillin binding protein compare
Atu2001 -0.5 -3.7 excinuclease ABC subunit B compare
Atu4502 -0.5 -3.0 cobalamin synthesis protein compare
Atu3910 -0.5 -2.9 LamB/YcsF family protein compare
Atu8195 -0.5 -1.7 hypothetical protein compare
Atu8034 -0.5 -2.1 hypothetical protein compare
Atu3644 -0.5 -2.1 hypothetical protein compare
Atu0479 -0.5 -2.4 ABC transporter, substrate binding protein (amino acid) compare
Atu4179 -0.5 -1.9 hypothetical protein compare
Atu1705 -0.5 -2.6 SEC-independent protein translocase protein compare
Atu1530 -0.5 -3.2 nitrogen fixation protein FixG compare
Atu0434 -0.5 -0.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3299 -0.5 -1.0 hypothetical protein compare
Atu3249 -0.5 -2.8 septum formation inhibitor compare
Atu1500 -0.5 -2.0 rare lipoprotein A compare
Atu4854 -0.5 -2.8 hypothetical protein compare
Atu4486 -0.5 -2.5 nitroreductase compare
Atu0926 -0.5 -1.7 hypothetical protein compare
Atu8163 -0.5 -2.0 hypothetical protein compare
Atu2648 -0.5 -2.2 hypothetical protein compare
Atu0923 -0.5 -1.7 hypothetical protein compare
Atu4279 -0.5 -2.8 LysR family transcriptional regulator compare
Atu1750 -0.5 -1.2 phosphoribosyl c-AMP cyclohydrolase compare
Atu3777 -0.5 -2.9 hypothetical protein compare
Atu1182 -0.5 -0.8 hypothetical protein compare
Atu4610 -0.5 -3.0 sugar nucleotide epimerase/dehydratase compare
Atu0762 -0.5 -1.9 hypothetical protein compare
Atu2184 -0.5 -2.1 transcriptional regulator, AsnC family compare
Atu1838 -0.5 -0.9 ABC transporter, substrate binding protein (amino acid) compare
Atu1537 -0.5 -3.1 cytochrome-c oxidase, FixN chain compare
Atu4615 -0.5 -3.1 glucose-1-phosphate thymidylyltransferase compare
Atu1464 -0.5 -2.0 glycine cleavage system T protein, aminomethyltransferase compare
Atu0135 -0.4 -0.9 uracil phosphoribosyltransferase compare
Atu6189 -0.4 -1.1 protein secretion chaperone compare
Atu3427 -0.4 -2.1 hypothetical protein compare
Atu1009 -0.4 -1.7 hypothetical protein compare
Atu0419 -0.4 -1.3 two component sensor kinase compare
Atu0681 -0.4 -2.8 hypothetical protein compare
Atu1466 -0.4 -1.1 hypothetical protein compare
Atu1484 -0.4 -2.1 transcriptional regulator compare
Atu3246 -0.4 -2.2 amino acid ABC transporter substrate-binding protein compare
Atu3912 -0.4 -2.8 hypothetical protein compare
Atu3423 -0.4 -1.2 hypothetical protein compare
Atu4831 -0.4 -2.2 hypothetical protein compare
Atu4824 -0.4 -3.0 IclR family transcriptional regulator compare
Atu0280 -0.4 -1.3 hypothetical protein compare
Atu1130 -0.4 -2.0 dehydrogenase compare
Atu0601 -0.4 -2.8 oxidoreductase compare
Atu2224 -0.4 -2.9 aldehyde dehydrogenase compare
Atu2692 -0.4 -1.1 intracellular septation protein compare
Atu1971 -0.4 -2.0 hypothetical protein compare
Atu2442 -0.4 -1.6 hypothetical protein compare
Atu8203 -0.4 -1.7 hypothetical protein compare
Atu6138 -0.4 -2.2 Repressor of the acc and arc operons compare


Specific Phenotypes

For 1 genes in this experiment