Experiment set22IT066 for Escherichia coli BW25113

Compare to:

T7_phage 0.00015625 MOI TC3

Genes with specific phenotypes:

  gene name fitness t score description  
b2038 rfbC -2.4 -5.2 dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) compare
b2040 rfbD -1.7 -5.2 dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) compare
b3832 rmuC +1.0 7.0 predicted recombination limiting protein (NCBI) compare
b1140 intE +1.0 5.5 e14 prophage; predicted integrase (NCBI) compare
b3723 bglG +1.1 5.0 transcriptional antiterminator of the bgl operon (NCBI) compare
b0137 yadL +1.1 6.3 predicted fimbrial-like adhesin protein (NCBI) compare
b0138 yadM +1.2 6.7 putative fimbrial-like protein (VIMSS) compare
b2593 yfiH +1.4 7.4 hypothetical protein (NCBI) compare
b4519 icdC +1.4 6.0 no description compare
b3507 dctR +1.6 10.6 protein involved in metabolism of C4-dicarboxylates (Katherine Huang) compare
b3508 yhiD +1.6 12.8 predicted Mg(2+) transport ATPase inner membrane protein (NCBI) compare
b3625 rfaY +1.6 6.1 lipopolysaccharide core biosynthesis protein (NCBI) compare
b2393 nupC +1.6 6.1 nucleoside (except guanosine) transporter (NCBI) compare
b2742 nlpD +1.6 5.5 predicted outer membrane lipoprotein (NCBI) compare
b3511 hdeD +1.6 13.3 acid-resistance membrane protein (NCBI) compare
b1856 yebA +1.7 8.0 orf, hypothetical protein (VIMSS) compare
b3510 hdeA +1.7 14.2 acid-resistance protein, possible chaperone , subunit of HdeA dimer, inactive form of acid-resistance protein (Katherine Huang) compare
b2819 recD +1.8 10.1 exonuclease V (RecBCD complex), alpha chain (NCBI) compare
b3509 hdeB +1.8 10.2 orf, hypothetical protein (VIMSS) compare
b3928 yiiU +1.9 8.5 hypothetical protein (NCBI) compare
b3700 recF +1.9 13.1 recombination protein F (NCBI) compare
b4527 b1354 +2.2 6.5 orf, hypothetical protein (VIMSS) compare
b2565 recO +2.2 6.9 DNA repair protein RecO (NCBI) compare
b0472 recR +2.2 9.9 recombination protein RecR (NCBI) compare
b2616 recN +2.3 12.0 recombination and repair protein (NCBI) compare
b2892 recJ +2.3 14.6 ssDNA exonuclease, 5' --> 3'-specific (NCBI) compare
b2435 amiA +2.9 13.4 N-acetylmuramoyl-l-alanine amidase I (NCBI) compare
b2011 sbcB +3.1 17.1 exonuclease I (NCBI) compare


Specific phenotypes for phage T7_phage across organisms