| | gene | name | fitness | t score | description | |
|---|
| b4202 | rpsR | -3.2 | -2.2 | 30S ribosomal protein S18 (NCBI) | compare |
| b3636 | rpmG | -2.5 | -2.9 | 50S ribosomal protein L33 (NCBI) | compare |
| b3979 | thrT | -2.4 | -1.0 | tRNA-Thr (NCBI) | compare |
| b0738 | tolR | -2.3 | -4.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1332 | ynaJ | -2.2 | -1.3 | predicted inner membrane protein (NCBI) | compare |
| b2830 | nudH | -2.1 | -2.4 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2699 | recA | -2.1 | -2.4 | recombinase A (NCBI) | compare |
| b3863 | polA | -2.1 | -1.4 | DNA polymerase I (NCBI) | compare |
| b1346 | ydaQ | -2.0 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1493 | gadB | -2.0 | -1.2 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1085 | b1085 | -2.0 | -3.7 | orf, hypothetical protein (VIMSS) | compare |
| b3183 | obgE | -1.9 | -1.7 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0739 | tolA | -1.9 | -4.5 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0630 | lipB | -1.9 | -2.1 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0114 | aceE | -1.8 | -1.3 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b1291 | sapD | -1.8 | -2.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3619 | rfaD | -1.8 | -5.3 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0890 | ftsK | -1.8 | -4.9 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3426 | glpD | -1.7 | -5.6 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b1290 | sapF | -1.7 | -2.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1025 | ycdT | -1.6 | -2.4 | predicted diguanylate cyclase (NCBI) | compare |
| b3811 | xerC | -1.6 | -2.2 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2935 | tktA | -1.6 | -2.1 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1613 | manA | -1.6 | -2.2 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b1236 | galU | -1.5 | -5.7 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2894 | xerD | -1.5 | -1.4 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4239 | treC | -1.5 | -3.8 | trehalose-6-P hydrolase (NCBI) | compare |
| b2285 | nuoE | -1.5 | -3.3 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0357 | yaiN | -1.5 | -1.9 | putative alpha helix chain (VIMSS) | compare |
| b2846 | yqeH | -1.5 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2528 | iscA | -1.4 | -1.7 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3613 | yibP | -1.4 | -4.7 | putative membrane protein (VIMSS) | compare |
| b4155 | yjeA | -1.4 | -1.0 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b0232 | yafN | -1.4 | -0.8 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3500 | gor | -1.4 | -2.0 | glutathione reductase (NCBI) | compare |
| b4177 | purA | -1.4 | -1.9 | adenylosuccinate synthetase (NCBI) | compare |
| b0222 | lpcA | -1.4 | -3.5 | phosphoheptose isomerase (NCBI) | compare |
| b4042 | dgkA | -1.4 | -2.6 | diacylglycerol kinase (NCBI) | compare |
| b2168 | fruK | -1.4 | -1.1 | 1-phosphofructokinase (NCBI) | compare |
| b3405 | ompR | -1.3 | -5.0 | osmolarity response regulator (NCBI) | compare |
| b3778 | rep | -1.3 | -5.9 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b0200 | gmhB | -1.3 | -1.9 | hypothetical protein (NCBI) | compare |
| b4041 | plsB | -1.3 | -2.2 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b4179 | vacB | -1.3 | -6.6 | putative enzyme (VIMSS) | compare |
| b3261 | fis | -1.3 | -2.4 | DNA-binding protein Fis (NCBI) | compare |
| b2820 | recB | -1.3 | -1.7 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0053 | surA | -1.3 | -5.7 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1506 | yneL | -1.3 | -1.6 | predicted transcriptional regulator (NCBI) | compare |
| b1361 | ydaW | -1.3 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b4651 | yibW | -1.3 | -0.8 | no description | compare |
| b4647 | mokA | -1.2 | -0.8 | no description | compare |
| b3839 | tatC | -1.2 | -5.5 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3290 | trkA | -1.2 | -2.7 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3728 | pstS | -1.2 | -3.1 | phosphate transporter subunit (NCBI) | compare |
| b4048 | yjbM | -1.2 | -1.7 | hypothetical protein (NCBI) | compare |
| b4596 | yciZ | -1.1 | -1.8 | hypothetical protein (RefSeq) | compare |
| b2498 | upp | -1.1 | -2.6 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b4375 | prfC | -1.1 | -4.6 | peptide chain release factor 3 (NCBI) | compare |
| b4201 | priB | -1.1 | -2.1 | primosomal replication protein N (NCBI) | compare |
| b3621 | rfaC | -1.1 | -3.8 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2284 | nuoF | -1.1 | -3.8 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b2318 | truA | -1.1 | -2.7 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0888 | trxB | -1.1 | -3.5 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2934 | cmtB | -1.1 | -0.7 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1850 | eda | -1.1 | -1.4 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0658 | ybeX | -1.1 | -1.2 | predicteed ion transport (NCBI) | compare |
| b1176 | minC | -1.1 | -2.2 | septum formation inhibitor (NCBI) | compare |
| b0051 | ksgA | -1.1 | -4.1 | dimethyladenosine transferase (NCBI) | compare |
| b0767 | ybhE | -1.1 | -2.8 | 6-phosphogluconolactonase (NCBI) | compare |
| b1351 | racC | -1.1 | -0.7 | Rac prophage; predicted protein (NCBI) | compare |
| b1690 | ydiM | -1.1 | -2.2 | predicted transporter (NCBI) | compare |
| b1165 | ymgA | -1.1 | -0.7 | hypothetical protein (NCBI) | compare |
| b1129 | phoQ | -1.0 | -1.2 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b3162 | deaD | -1.0 | -4.2 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1363 | trkG | -1.0 | -0.7 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1865 | nudB | -1.0 | -1.2 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1497 | b1497 | -1.0 | -0.6 | putative enzyme (VIMSS) | compare |
| b3741 | gidA | -1.0 | -3.9 | glucose-inhibited division protein A (NCBI) | compare |
| b4345 | mcrC | -1.0 | -0.7 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b1258 | yciF | -1.0 | -0.9 | hypothetical protein (NCBI) | compare |
| b3386 | rpe | -1.0 | -0.7 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b3916 | pfkA | -1.0 | -2.7 | 6-phosphofructokinase (NCBI) | compare |
| b1130 | phoP | -1.0 | -1.6 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b4203 | rplI | -1.0 | -4.0 | 50S ribosomal protein L9 (NCBI) | compare |
| b1882 | cheY | -1.0 | -0.7 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b2912 | ygfA | -1.0 | -2.4 | putative ligase (VIMSS) | compare |
| b3706 | trmE | -1.0 | -3.4 | tRNA modification GTPase (NCBI) | compare |
| b2071 | yegJ | -1.0 | -1.6 | hypothetical protein (NCBI) | compare |
| b3052 | rfaE | -1.0 | -3.8 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b4410 | ecnA | -1.0 | -1.2 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b4414 | tff | -0.9 | -3.3 | unknown RNA (NCBI) | compare |
| b3623 | rfaK | -0.9 | -1.9 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b3210 | arcB | -0.9 | -5.7 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b4373 | rimI | -0.9 | -3.1 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b3977 | tyrU | -0.9 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b3649 | rpoZ | -0.9 | -3.2 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b1252 | tonB | -0.9 | -2.1 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b0018 | mokC | -0.9 | -1.2 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1103 | ycfF | -0.9 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2904 | gcvH | -0.9 | -2.1 | glycine cleavage system protein H (NCBI) | compare |
| b1370 | insH-5 | -0.9 | -2.0 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b2567 | rnc | -0.9 | -1.0 | ribonuclease III (NCBI) | compare |
| b1576 | ydfD | -0.9 | -0.4 | Qin prophage; predicted protein (NCBI) | compare |
| b4146 | yjeK | -0.9 | -2.1 | predicted lysine aminomutase (NCBI) | compare |
| b1499 | ydeO | -0.9 | -0.4 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b0729 | sucD | -0.9 | -2.1 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3204 | ptsN | -0.9 | -3.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3609 | secB | -0.9 | -2.7 | export protein SecB (NCBI) | compare |
| b1286 | rnb | -0.9 | -1.9 | exoribonuclease II (NCBI) | compare |
| b0125 | hpt | -0.9 | -4.1 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b1545 | pinQ | -0.9 | -0.3 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b3725 | pstB | -0.9 | -1.1 | phosphate transporter subunit (NCBI) | compare |
| b1001 | yccE | -0.8 | -0.5 | hypothetical protein (NCBI) | compare |
| b1863 | ruvC | -0.8 | -1.5 | Holliday junction resolvase (NCBI) | compare |
| b3026 | qseC | -0.8 | -2.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2698 | recX | -0.8 | -1.6 | RecA regulator RecX (NCBI) | compare |
| b0439 | lon | -0.8 | -3.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2822 | recC | -0.8 | -3.4 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b0705 | ybfL | -0.8 | -0.6 | putative receptor protein (VIMSS) | compare |
| b2297 | pta | -0.8 | -0.8 | phosphate acetyltransferase (NCBI) | compare |
| b2569 | lepA | -0.8 | -2.6 | GTP-binding protein LepA (NCBI) | compare |
| b1347 | ydaC | -0.8 | -0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b3875 | ompL | -0.8 | -2.2 | predicted outer membrane porin L (NCBI) | compare |
| b0145 | dksA | -0.8 | -2.5 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1058 | yceO | -0.8 | -0.4 | hypothetical protein (NCBI) | compare |
| b2288 | nuoA | -0.8 | -2.3 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0740 | tolB | -0.8 | -2.7 | translocation protein TolB precursor (NCBI) | compare |
| b1773 | ydjI | -0.8 | -1.9 | predicted aldolase (NCBI) | compare |
| b4545 | ypdJ | -0.8 | -1.1 | no description | compare |
| b3761 | trpT | -0.8 | -1.3 | tRNA-Trp (NCBI) | compare |
| b2276 | nuoN | -0.8 | -3.2 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b2259 | pmrD | -0.8 | -1.0 | polymyxin resistance protein B (VIMSS) | compare |
| b4590 | ybfK | -0.8 | -0.5 | hypothetical protein (RefSeq) | compare |
| b2055 | wcaE | -0.8 | -0.5 | predicted glycosyl transferase (NCBI) | compare |
| b1182 | hlyE | -0.8 | -0.7 | hemolysin E (VIMSS) | compare |
| b1579 | intQ | -0.8 | -2.6 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b4520 | ymgF | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b3631 | rfaG | -0.8 | -6.0 | glucosyltransferase I (NCBI) | compare |
| b2377 | yfdY | -0.8 | -1.3 | predicted inner membrane protein (NCBI) | compare |
| b1712 | ihfA | -0.8 | -1.4 | integration host factor subunit alpha (NCBI) | compare |
| b3781 | trxA | -0.8 | -2.5 | thioredoxin 1 (VIMSS) | compare |
| b1855 | lpxM | -0.8 | -3.8 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0722 | sdhD | -0.8 | -3.3 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b1109 | ndh | -0.8 | -1.8 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b2642 | yfjW | -0.8 | -0.5 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2446 | yffO | -0.8 | -2.0 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b1292 | sapC | -0.8 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0310 | ykgH | -0.7 | -0.9 | predicted inner membrane protein (NCBI) | compare |
| b0726 | sucA | -0.7 | -2.7 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1257 | yciE | -0.7 | -0.4 | hypothetical protein (NCBI) | compare |
| b3198 | kdsC | -0.7 | -1.7 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3027 | ygiZ | -0.7 | -0.5 | conserved inner membrane protein (NCBI) | compare |
| b1837 | yebW | -0.7 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0706 | ybfD | -0.7 | -1.5 | hypothetical protein (NCBI) | compare |
| b2278 | nuoL | -0.7 | -4.3 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2504 | yfgG | -0.7 | -1.0 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b3630 | rfaP | -0.7 | -5.0 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2280 | nuoJ | -0.7 | -2.9 | NADH dehydrogenase subunit J (NCBI) | compare |
| b4435 | isrC | -0.7 | -1.4 | unknown RNA (NCBI) | compare |
| b2620 | smpB | -0.7 | -0.8 | SsrA-binding protein (NCBI) | compare |
| b2283 | nuoG | -0.7 | -3.8 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2330 | yfcB | -0.7 | -1.2 | putative adenine-specific methylase (VIMSS) | compare |
| b3493 | pitA | -0.7 | -3.8 | phosphate transporter, low-affinity (NCBI) | compare |
| b1635 | gst | -0.7 | -2.0 | glutathionine S-transferase (NCBI) | compare |
| b0683 | fur | -0.7 | -0.8 | ferric uptake regulator (NCBI) | compare |
| b1167 | ymgC | -0.7 | -0.3 | hypothetical protein (NCBI) | compare |
| b3264 | envR | -0.7 | -2.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1921 | fliZ | -0.7 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1969 | yedW | -0.7 | -2.5 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b1084 | rne | -0.7 | -3.2 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b3387 | dam | -0.7 | -4.8 | DNA adenine methylase (NCBI) | compare |
| b3962 | udhA | -0.7 | -3.2 | putative oxidoreductase (VIMSS) | compare |
| b4593 | ymgI | -0.6 | -0.5 | hypothetical protein (RefSeq) | compare |
| b3626 | rfaJ | -0.6 | -2.8 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b1121 | ycfZ | -0.6 | -1.3 | predicted inner membrane protein (NCBI) | compare |
| b3138 | agaB | -0.6 | -1.5 | N-acetylgalactosamine-specific enzyme IIB component of PTS (NCBI) | compare |
| b3624 | rfaZ | -0.6 | -1.3 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3658 | selC | -0.6 | -1.6 | tRNA-Sec (NCBI) | compare |
| b1409 | ynbB | -0.6 | -1.0 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b4497 | yeeL | -0.6 | -0.9 | no description | compare |
| b4494 | arpB | -0.6 | -1.5 | no description | compare |
| b1330 | ynaI | -0.6 | -2.6 | conserved inner membrane protein (NCBI) | compare |
| b0429 | cyoD | -0.6 | -2.6 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b1194 | ycgR | -0.6 | -2.2 | protein involved in flagellar function (NCBI) | compare |
| b4546 | ypeB | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b1139 | lit | -0.6 | -2.5 | e14 prophage; cell death peptidase, inhibitor of T4 late gene expression (NCBI) | compare |
| b3620 | rfaF | -0.6 | -2.4 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1548 | nohA | -0.6 | -1.1 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b4592 | yccB | -0.6 | -1.4 | hypothetical protein (RefSeq) | compare |
| b0737 | tolQ | -0.6 | -1.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2688 | gshA | -0.6 | -3.9 | glutamate--cysteine ligase (NCBI) | compare |
| b0560 | nohB | -0.6 | -1.5 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b0386 | proC | -0.6 | -1.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1183 | umuD | -0.6 | -0.6 | DNA polymerase V, subunit D (NCBI) | compare |
| b0099 | mutT | -0.6 | -2.9 | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP (NCBI) | compare |
| b0430 | cyoC | -0.6 | -2.8 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b4012 | yjaB | -0.6 | -1.4 | predicted acetyltransferase (NCBI) | compare |
| b3844 | fre | -0.6 | -3.3 | NAD(P)H-flavin reductase (NCBI) | compare |
| b2263 | yfbB | -0.6 | -1.2 | predicted peptidase (NCBI) | compare |
| b3238 | yhcN | -0.6 | -1.5 | orf, hypothetical protein (VIMSS) | compare |