| | gene | name | fitness | t score | description | |
|---|
| b1882 | cheY | -2.9 | -1.1 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1104 | ycfL | -2.8 | -2.1 | hypothetical protein (NCBI) | compare |
| b4503 | yafF | -2.7 | -1.4 | no description | compare |
| b2894 | xerD | -2.7 | -1.8 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1567 | intK | -2.6 | -2.8 | Qin prophage; predicted protein (RefSeq) | compare |
| b1841 | yobA | -2.5 | -2.3 | hypothetical protein (NCBI) | compare |
| b2259 | pmrD | -2.4 | -1.5 | polymyxin resistance protein B (VIMSS) | compare |
| b0142 | folK | -2.4 | -0.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b0730 | mngR | -2.4 | -2.3 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b2531 | iscR | -2.3 | -2.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1361 | ydaW | -2.2 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1540 | ydfH | -2.0 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1984 | asnW | -2.0 | -1.5 | tRNA-Asn (NCBI) | compare |
| b0200 | gmhB | -2.0 | -1.9 | hypothetical protein (NCBI) | compare |
| b3863 | polA | -2.0 | -2.2 | DNA polymerase I (NCBI) | compare |
| b1613 | manA | -1.9 | -2.4 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3290 | trkA | -1.9 | -3.1 | potassium transporter peripheral membrane component (NCBI) | compare |
| b4048 | yjbM | -1.9 | -1.3 | hypothetical protein (NCBI) | compare |
| b3183 | obgE | -1.8 | -1.3 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0630 | lipB | -1.8 | -1.7 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2934 | cmtB | -1.7 | -1.2 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1176 | minC | -1.7 | -2.7 | septum formation inhibitor (NCBI) | compare |
| b2699 | recA | -1.7 | -1.6 | recombinase A (NCBI) | compare |
| b0737 | tolQ | -1.7 | -3.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1709 | btuD | -1.7 | -1.2 | vitamin B12-transporter ATPase (NCBI) | compare |
| b4375 | prfC | -1.6 | -5.5 | peptide chain release factor 3 (NCBI) | compare |
| b1412 | azoR | -1.6 | -1.8 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b3169 | nusA | -1.5 | -2.2 | transcription elongation factor NusA (NCBI) | compare |
| b3162 | deaD | -1.5 | -4.5 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1454 | yncG | -1.5 | -2.5 | predicted enzyme (NCBI) | compare |
| b1871 | yecP | -1.5 | -3.8 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b3261 | fis | -1.5 | -2.4 | DNA-binding protein Fis (NCBI) | compare |
| b4685 | yrbN | -1.5 | -3.5 | expressed protein (RefSeq) | compare |
| b1383 | ydbL | -1.4 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b1961 | dcm | -1.4 | -1.5 | DNA cytosine methylase (NCBI) | compare |
| b0247 | ykfG | -1.4 | -1.5 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1429 | tehA | -1.4 | -1.0 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b4647 | mokA | -1.4 | -0.9 | no description | compare |
| b2248 | yfaX | -1.3 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1348 | lar | -1.3 | -1.5 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1563 | relE | -1.3 | -1.7 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b1758 | b1758 | -1.3 | -1.0 | putative cytochrome oxidase (VIMSS) | compare |
| b3341 | rpsG | -1.2 | -0.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b2330 | yfcB | -1.2 | -1.5 | putative adenine-specific methylase (VIMSS) | compare |
| b1819 | manZ | -1.2 | -3.1 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b4203 | rplI | -1.2 | -3.6 | 50S ribosomal protein L9 (NCBI) | compare |
| b2642 | yfjW | -1.2 | -1.1 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1582 | ynfA | -1.2 | -1.9 | hypothetical protein (NCBI) | compare |
| b2939 | yqgB | -1.2 | -1.7 | predicted protein (RefSeq) | compare |
| b3181 | greA | -1.1 | -4.9 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b1108 | ycfP | -1.1 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1236 | galU | -1.1 | -3.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1590 | ynfH | -1.1 | -2.7 | oxidoreductase, membrane subunit (NCBI) | compare |
| b3728 | pstS | -1.1 | -3.4 | phosphate transporter subunit (NCBI) | compare |
| b2822 | recC | -1.1 | -4.6 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1553 | ydfP | -1.1 | -2.1 | Qin prophage; conserved protein (NCBI) | compare |
| b0114 | aceE | -1.1 | -0.7 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b0145 | dksA | -1.1 | -2.1 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0049 | apaH | -1.1 | -2.4 | diadenosinetetraphosphatase (NCBI) | compare |
| b4544 | yfbW | -1.0 | -3.2 | hypothetical protein (NCBI) | compare |
| b4603 | rseX | -1.0 | -0.6 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1493 | gadB | -1.0 | -0.6 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1196 | ycgY | -1.0 | -2.2 | hypothetical protein (NCBI) | compare |
| b2930 | yggF | -1.0 | -2.6 | predicted hexoseP phosphatase (NCBI) | compare |
| b0617 | citD | -1.0 | -1.5 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b0890 | ftsK | -1.0 | -3.8 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0641 | rlpB | -1.0 | -2.2 | minor lipoprotein (NCBI) | compare |
| b4453 | ldrD | -1.0 | -1.7 | toxic polypeptide, small (NCBI) | compare |
| b0741 | pal | -1.0 | -2.8 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1727 | yniC | -1.0 | -2.2 | predicted hydrolase (NCBI) | compare |
| b2579 | yfiD | -1.0 | -1.4 | pyruvate formate lyase subunit (NCBI) | compare |
| b2576 | srmB | -0.9 | -2.3 | ATP-dependent RNA helicase (NCBI) | compare |
| b0222 | lpcA | -0.9 | -1.3 | phosphoheptose isomerase (NCBI) | compare |
| b1516 | lsrB | -0.9 | -2.9 | AI2 transporter (NCBI) | compare |
| b1129 | phoQ | -0.9 | -0.6 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b1860 | ruvB | -0.9 | -0.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b2288 | nuoA | -0.9 | -1.7 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0051 | ksgA | -0.9 | -2.3 | dimethyladenosine transferase (NCBI) | compare |
| b1850 | eda | -0.9 | -1.4 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0439 | lon | -0.9 | -3.4 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b4146 | yjeK | -0.9 | -2.3 | predicted lysine aminomutase (NCBI) | compare |
| b1443 | ydcV | -0.9 | -2.7 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b2356 | yfdM | -0.9 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3613 | yibP | -0.9 | -2.7 | putative membrane protein (VIMSS) | compare |
| b1677 | lpp | -0.9 | -1.1 | murein lipoprotein (NCBI) | compare |
| b4538 | yoeF | -0.9 | -1.1 | hypothetical protein (RefSeq) | compare |
| b1025 | ycdT | -0.9 | -1.3 | predicted diguanylate cyclase (NCBI) | compare |
| b2830 | nudH | -0.9 | -1.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1595 | ynfL | -0.9 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2935 | tktA | -0.9 | -1.6 | transketolase 1, thiamin-binding (NCBI) | compare |
| b4593 | ymgI | -0.9 | -0.6 | hypothetical protein (RefSeq) | compare |
| b1765 | ydjA | -0.8 | -0.5 | predicted oxidoreductase (NCBI) | compare |
| b0796 | ybiH | -0.8 | -3.3 | putative transcriptional regulator (VIMSS) | compare |
| b3463 | ftsE | -0.8 | -0.6 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1070 | flgN | -0.8 | -0.8 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b3500 | gor | -0.8 | -1.2 | glutathione reductase (NCBI) | compare |
| b3811 | xerC | -0.8 | -1.9 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1290 | sapF | -0.8 | -1.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3101 | yqjF | -0.8 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1675 | ydhZ | -0.8 | -3.3 | hypothetical protein (NCBI) | compare |
| b1273 | yciN | -0.8 | -1.0 | hypothetical protein (NCBI) | compare |
| b2281 | nuoI | -0.8 | -1.3 | NADH dehydrogenase subunit I (NCBI) | compare |
| b1123 | potD | -0.8 | -2.7 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b4458 | oxyS | -0.8 | -1.1 | global regulatory RNA (NCBI) | compare |
| b2488 | hyfH | -0.8 | -2.3 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b1566 | flxA | -0.8 | -1.4 | Qin prophage; predicted protein (NCBI) | compare |
| b1242 | ychE | -0.8 | -1.7 | predicted inner membrane protein (NCBI) | compare |
| b1971 | yedY | -0.8 | -2.5 | hypothetical protein (NCBI) | compare |
| b1610 | tus | -0.8 | -3.0 | DNA replication terminus site-binding protein (NCBI) | compare |
| b2329 | aroC | -0.8 | -3.1 | chorismate synthase (NCBI) | compare |
| b2820 | recB | -0.8 | -1.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0294 | ykgK | -0.8 | -2.2 | predicted regulator (NCBI) | compare |
| b1936 | intG | -0.8 | -0.7 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b2105 | yohL | -0.8 | -1.9 | hypothetical protein (NCBI) | compare |
| b4631 | ykgQ | -0.8 | -1.2 | no description | compare |
| b0828 | iaaA | -0.7 | -2.1 | L-asparaginase (NCBI) | compare |
| b2362 | yfdS | -0.7 | -2.3 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2284 | nuoF | -0.7 | -2.6 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1523 | yneG | -0.7 | -0.6 | hypothetical protein (NCBI) | compare |
| b4649 | ysaD | -0.7 | -2.8 | no description | compare |
| b1462 | b1462 | -0.7 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1263 | trpD | -0.7 | -1.9 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b1120 | cobB | -0.7 | -1.4 | deacetylase of acs and cheY, regulates chemotaxis (NCBI) | compare |
| b0946 | ycbW | -0.7 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b3512 | GadE | -0.7 | -2.3 | acid-responsive regulator of gadA and gadBC (Katherine Huang) | compare |
| b2325 | yfcL | -0.7 | -2.0 | hypothetical protein (NCBI) | compare |
| b3844 | fre | -0.7 | -2.8 | NAD(P)H-flavin reductase (NCBI) | compare |
| b1185 | dsbB | -0.7 | -1.1 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b1949 | fliQ | -0.7 | -1.5 | flagellar biosynthesis protein Q (NCBI) | compare |
| b2569 | lepA | -0.7 | -2.5 | GTP-binding protein LepA (NCBI) | compare |
| b3426 | glpD | -0.7 | -2.6 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b2518 | ndk | -0.7 | -1.3 | nucleoside diphosphate kinase (NCBI) | compare |
| b4172 | hfq | -0.7 | -0.6 | RNA-binding protein Hfq (NCBI) | compare |
| b1302 | puuE | -0.7 | -2.0 | GABA aminotransferase, PLP-dependent (NCBI) | compare |
| b4413 | sokC | -0.7 | -1.1 | regulatory antisense RNA (NCBI) | compare |
| b1359 | ydaU | -0.7 | -1.4 | Rac prophage; conserved protein (NCBI) | compare |
| b4515 | ybgT | -0.7 | -1.0 | hypothetical protein (NCBI) | compare |
| b3839 | tatC | -0.6 | -3.4 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1160 | elbA | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b3999 | yjaG | -0.6 | -3.9 | hypothetical protein (NCBI) | compare |
| b1282 | yciH | -0.6 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4529 | ydbJ | -0.6 | -0.6 | hypothetical protein (NCBI) | compare |
| b1060 | yceP | -0.6 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3950 | frwB | -0.6 | -1.2 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b1130 | phoP | -0.6 | -0.7 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2906 | visC | -0.6 | -2.8 | hypothetical protein (NCBI) | compare |
| b2027 | wzzB | -0.6 | -1.9 | regulator of length of O-antigen component of lipopolysaccharide chains (VIMSS) | compare |
| b1512 | lsrR | -0.6 | -1.5 | lsr operon transcriptional repressor (NCBI) | compare |
| b4570 | lomR | -0.6 | -0.8 | no description | compare |
| b0101 | yacG | -0.6 | -0.9 | zinc-binding protein (NCBI) | compare |
| b1344 | ydaO | -0.6 | -1.9 | predicted C32 tRNA thiolase (NCBI) | compare |
| b0610 | rnk | -0.6 | -1.6 | nucleoside diphosphate kinase regulator (NCBI) | compare |
| b3164 | pnp | -0.6 | -1.8 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0454 | ybaZ | -0.6 | -2.9 | predicted methyltransferase (NCBI) | compare |
| b1164 | ycgZ | -0.6 | -0.6 | hypothetical protein (NCBI) | compare |
| b3002 | yqhA | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b4435 | isrC | -0.6 | -0.9 | unknown RNA (NCBI) | compare |
| b0424 | thiJ | -0.6 | -2.1 | 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis (VIMSS) | compare |
| b3623 | rfaK | -0.6 | -1.6 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b1486 | ddpB | -0.6 | -1.3 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b1271 | yciK | -0.6 | -1.7 | short chain dehydrogenase (NCBI) | compare |
| b4640 | yoeG | -0.6 | -1.3 | no description | compare |
| b1074 | flgC | -0.6 | -1.0 | flagellar basal-body rod protein C (NCBI) | compare |
| b1735 | chbR | -0.6 | -1.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1817 | manX | -0.6 | -2.3 | fused mannose-specific PTS enzymes: IIA component/IIB component (NCBI) | compare |
| b2629 | yfjM | -0.6 | -1.6 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b0082 | mraW | -0.6 | -1.4 | S-adenosyl-methyltransferase (NCBI) | compare |
| b1507 | hipA | -0.6 | -1.4 | regulator with hipB (NCBI) | compare |
| b1764 | selD | -0.6 | -2.2 | selenophosphate synthetase (NCBI) | compare |
| b1674 | ydhY | -0.6 | -2.7 | predicted 4Fe-4S ferridoxin-type protein (NCBI) | compare |
| b1126 | potA | -0.6 | -1.8 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b2466 | ypfG | -0.6 | -1.8 | hypothetical protein (NCBI) | compare |
| b1307 | pspD | -0.6 | -0.8 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b2277 | nuoM | -0.6 | -2.1 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1660 | ydhC | -0.6 | -1.4 | predicted transporter (NCBI) | compare |
| b3860 | dsbA | -0.6 | -3.4 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b0720 | gltA | -0.6 | -2.6 | citrate synthase (NCBI) | compare |
| b4060 | yjcB | -0.6 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b1513 | lsrA | -0.6 | -1.8 | fused AI2 transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b3636 | rpmG | -0.6 | -1.0 | 50S ribosomal protein L33 (NCBI) | compare |
| b0437 | clpP | -0.6 | -1.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1838 | pphA | -0.6 | -1.9 | protein phosphatase 1 modulates phosphoproteins, signals protein misfolding (VIMSS) | compare |
| b3443 | yrhA | -0.5 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2449 | yffR | -0.5 | -1.8 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0059 | hepA | -0.5 | -4.1 | ATP-dependent helicase HepA (NCBI) | compare |
| b2072 | yegK | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b2809 | b2809 | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2807 | ygdD | -0.5 | -1.6 | conserved inner membrane protein (NCBI) | compare |
| b1693 | aroD | -0.5 | -1.7 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3280 | yrdB | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b0976 | hyaE | -0.5 | -1.4 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b2326 | yfcM | -0.5 | -2.5 | hypothetical protein (NCBI) | compare |
| b1848 | yebG | -0.5 | -0.8 | conserved protein regulated by LexA (NCBI) | compare |
| b1814 | sdaA | -0.5 | -1.7 | L-serine deaminase I (NCBI) | compare |
| b3229 | sspA | -0.5 | -1.5 | stringent starvation protein A (NCBI) | compare |
| b3190 | yrbA | -0.5 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b4596 | yciZ | -0.5 | -0.9 | hypothetical protein (RefSeq) | compare |
| b3032 | cpdA | -0.5 | -2.3 | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | compare |
| b0189 | yaeO | -0.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0401 | brnQ | -0.5 | -2.6 | predicted branched chain amino acid transporter (LIV-II) (NCBI) | compare |