Experiment set22IT004 for Pseudomonas putida KT2440
Growth with Sodium Chloride 500 mM; with MOPS
Group: stressMedia: soilextract_PNNL_Prosser_PlotA_B_20191220 + D-Glucose (10 mM) + Ammonium chloride (10 mM) + 3-(N-morpholino)propanesulfonic acid (40 mM) + Sodium Chloride (500 mM), pH=7
Culturing: Putida_ML5_PNNL, 96 deep-well microplate; 1 mL volume, Aerobic, at 30 (C)
By: Joshua Elmore on 1/6/20
Specific Phenotypes
For 5 genes in this experiment
For stress D-Glucose in Pseudomonas putida KT2440
For stress D-Glucose across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Mannitol Utilization | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| mannitol degradation I | 1 | 1 | 1 |
| mannitol cycle | 5 | 2 | 1 |
| superpathway of hexitol degradation (bacteria) | 18 | 13 | 1 |
| hexitol fermentation to lactate, formate, ethanol and acetate | 19 | 14 | 1 |