Experiment set21S420 for Agrobacterium fabrum C58

Compare to:

phage 100.3

200 most important genes:

  gene name fitness t score description  
Atu4610 -5.0 -11.6 sugar nucleotide epimerase/dehydratase compare
Atu4608 -4.8 -15.1 hypothetical protein compare
Atu4609 -4.5 -16.2 glycosyltransferase compare
Atu3730 -3.4 -2.3 hypothetical protein compare
Atu3763 -2.7 -1.8 hypothetical protein compare
Atu0450 -2.0 -13.7 transcription antitermination protein compare
Atu0464 -1.9 -9.9 hypothetical protein compare
Atu2249 -1.8 -1.4 hypothetical protein compare
Atu0189 -1.7 -3.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0471 -1.6 -3.6 hypothetical protein compare
Atu8099 -1.5 -2.4 hypothetical protein compare
Atu8035 -1.5 -1.8 hypothetical protein compare
Atu8128 -1.4 -7.8 putative bacteriophage P2 tail protein compare
Atu0460 -1.4 -5.7 hypothetical protein compare
Atu3469 -1.4 -1.3 phosphoglyceromutase compare
Atu0469 -1.4 -7.8 hypothetical protein compare
Atu0437 -1.4 -6.7 hypothetical protein compare
Atu0458 -1.3 -5.3 hypothetical protein compare
Atu0566 -1.3 -2.1 hypothetical protein compare
Atu0461 -1.3 -9.3 hypothetical protein compare
Atu4217 -1.3 -1.5 TetR family transcriptional regulator compare
Atu8127 -1.3 -9.8 hypothetical protein compare
Atu0115 -1.3 -1.1 hypothetical protein compare
Atu0457 -1.3 -7.8 hypothetical protein compare
Atu0436 -1.2 -9.9 hypothetical protein compare
Atu0452 -1.2 -7.9 hypothetical protein compare
Atu0470 -1.2 -3.3 hypothetical protein compare
Atu0463 -1.2 -4.8 hypothetical protein compare
Atu0454 -1.2 -7.8 hypothetical protein compare
Atu1225 -1.2 -0.9 hypothetical protein compare
Atu0435 -1.2 -2.6 tRNA-Gly compare
Atu0468 -1.2 -9.2 hypothetical protein compare
Atu0467 -1.2 -4.6 hypothetical protein compare
Atu0188 -1.2 -3.2 ABC transporter, membrane spanning protein (peptide) compare
Atu8125 -1.2 -7.4 hypothetical protein compare
Atu0419 -1.2 -1.3 two component sensor kinase compare
Atu8083 -1.1 -9.2 hypothetical protein compare
Atu4711 -1.1 -3.5 two component sensor kinase compare
Atu0453 -1.1 -8.6 hypothetical protein compare
Atu0422 -1.1 -1.5 ABC transporter, membrane spanning protein compare
Atu0190 -1.1 -4.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1163 -1.1 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu8126 -1.1 -4.2 putative phage tail protein I compare
Atu1566 -1.1 -1.4 hypothetical protein compare
Atu1774 -1.0 -4.3 ABC transporter, substrate binding protein (peptide) compare
Atu0434 -1.0 -1.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1026 -1.0 -2.3 hypothetical protein compare
Atu0421 -1.0 -1.0 ABC transporter, membrane spanning protein compare
Atu0051 -1.0 -3.1 two component sensor kinase compare
Atu3739 -1.0 -1.8 phosphoglycerate kinase compare
Atu1619 -1.0 -1.8 protein-export membrane protein SECG compare
Atu6036 -0.9 -0.9 entry-exclusion protein compare
Atu1336 -0.9 -2.5 hypothetical protein compare
Atu1468 -0.9 -3.7 hypothetical protein compare
Atu2640 -0.9 -3.0 hypothetical protein compare
Atu4791 -0.9 -2.1 hypothetical protein compare
Atu1810 -0.9 -0.5 hypothetical protein compare
Atu1028 -0.9 -1.0 hypothetical protein compare
Atu0824 -0.9 -0.9 hypothetical protein compare
Atu1103 -0.9 -2.4 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0486 -0.9 -2.2 dihydroorotate dehydrogenase compare
Atu4615 -0.9 -4.2 glucose-1-phosphate thymidylyltransferase compare
Atu0785 -0.8 -1.7 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu0106 -0.8 -2.3 cold shock protein compare
Atu2464 -0.8 -1.8 formyltetrahydrofolate deformylase compare
Atu0269 -0.8 -3.1 exodeoxyribonuclease VII large subunit compare
Atu4618 -0.8 -5.5 dTDP-rhamnose-3,5-epimerase compare
Atu0050 -0.8 -2.9 two component response regulator compare
Atu0836 -0.8 -1.5 Glutathione-S-transferase compare
Atu8195 -0.8 -2.0 hypothetical protein compare
Atu1739 -0.8 -2.1 permease compare
Atu6039 -0.8 -3.0 conjugal transfer protein compare
Atu0912 -0.8 -0.8 Na+/H+ antiporter compare
Atu1140 -0.8 -1.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu5437 -0.8 -2.5 hypothetical protein compare
Atu8138 -0.8 -1.2 hypothetical protein compare
Atu8162 -0.8 -1.3 hypothetical protein compare
Atu3353 -0.8 -4.3 mannose-1-phosphate guanylyltransferase compare
Atu2554 -0.7 -1.1 lysyl-tRNA synthetase compare
Atu8153 -0.7 -2.7 hypothetical protein compare
Atu3486 -0.7 -1.6 DeoR family transcriptional regulator compare
Atu2456 -0.7 -1.9 lactoylglutathione lyase compare
Atu8025 -0.7 -1.1 hypothetical protein compare
Atu0462 -0.7 -5.0 endolysin compare
Atu1847 -0.7 -1.5 hypothetical protein compare
Atu0976 -0.7 -0.9 cycL protein compare
Atu0340 -0.7 -1.1 SAM dependent methyltransferase compare
Atu2237 -0.7 -1.4 cytochrome c1 compare
Atu1844 -0.7 -1.6 Phosphoribosylformylglycinamidine synthetase compare
Atu2728 -0.7 -1.4 beta (1-->2) glucan export ATP-binding protein compare
Atu5540 -0.7 -0.5 hypothetical protein compare
Atu0166 -0.7 -1.2 hypothetical protein compare
Atu3465 -0.7 -1.9 metallo-beta-lactamase superfamily protein compare
Atu0043 -0.7 -1.5 imidazoleglycerol-phosphate dehydratase compare
Atu1364 -0.7 -2.0 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4228 -0.7 -3.2 formyl-methanofuran dehydrogenase compare
Atu0739 -0.7 -1.8 hypothetical protein compare
Atu8055 -0.7 -2.4 hypothetical protein compare
Atu8087 -0.7 -0.8 putative peptidoglycan binding protein compare
Atu2115 -0.7 -3.1 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu3613 -0.7 -2.6 hypothetical protein compare
Atu4617 -0.6 -3.8 dTDP-D-glucose-4,6-dehydratase compare
Atu1889 -0.6 -1.6 diacylglycerol kinase compare
Atu8176 -0.6 -1.3 hypothetical protein compare
Atu5470 -0.6 -1.1 hypothetical protein compare
Atu6114 -0.6 -1.6 hypothetical protein compare
Atu2057 -0.6 -1.2 DNA helicase II compare
Atu8124 -0.6 -3.4 hypothetical protein compare
Atu6045 -0.6 -1.0 replication protein C compare
Atu0206 -0.6 -2.2 hypothetical protein compare
Atu1449 -0.6 -2.4 potassium uptake protein compare
Atu1223 -0.6 -0.5 hypothetical protein compare
Atu1606 -0.6 -2.4 methionine aminopeptidase compare
Atu3759 -0.6 -1.0 hypothetical protein compare
Atu3472 -0.6 -1.7 2-oxoisovalerate dehydrogenase subunit beta compare
Atu0585 -0.6 -1.8 hypothetical protein compare
Atu8094 -0.6 -1.5 hypothetical protein compare
Atu1892 -0.6 -1.7 hypothetical protein compare
Atu2406 -0.6 -1.4 hypothetical protein compare
Atu0538 -0.6 -1.5 hypothetical protein compare
Atu1602 -0.6 -1.7 transcriptional activator, Crp family compare
Atu6133 -0.6 -2.5 conserved hypothetical protein compare
Atu3095 -0.6 -1.5 hypothetical protein compare
Atu3126 -0.6 -2.5 hypothetical protein compare
Atu1570 -0.6 -0.6 hypothetical protein compare
Atu1099 -0.5 -2.6 hypothetical protein compare
Atu4613 -0.5 -4.0 glycosyltransferase compare
Atu1869 -0.5 -1.5 hypothetical protein compare
Atu3697 -0.5 -2.4 ATP-dependent protease LA 2 compare
Atu1232 -0.5 -1.3 hypothetical protein compare
Atu8057 -0.5 -1.4 hypothetical protein compare
Atu3127 -0.5 -3.2 acetyltransferase compare
Atu2832 -0.5 -1.6 tRNA modification GTPase compare
Atu3169 -0.5 -1.9 sorbitol/mannitol ABC transporter permease compare
Atu0920 -0.5 -2.0 hypothetical protein compare
Atu1754 -0.5 -0.8 hypothetical protein compare
Atu0846 -0.5 -1.8 transcriptional regulator, MarR family compare
Atu0368 -0.5 -2.0 tRNA pseudouridine synthase I compare
Atu2479 -0.5 -2.3 tRNA-Gly compare
Atu2452 -0.5 -1.4 hypothetical protein compare
Atu2682 -0.5 -1.6 hypothetical protein compare
Atu2762 -0.5 -1.8 hypothetical protein compare
Atu8041 -0.5 -1.6 hypothetical protein compare
Atu0971 -0.5 -1.2 two component sensor kinase compare
Atu2113 -0.5 -1.2 N-acetylmuramoyl-L-alanine amidase compare
Atu4589 -0.5 -1.6 transmembrane transport protein compare
Atu4187 -0.5 -0.7 tRNA-Met compare
Atu4221 -0.5 -2.4 hypothetical protein compare
Atu3413 -0.5 -1.0 AsnC family transcriptional regulator compare
Atu1031 -0.5 -1.4 hypothetical protein compare
Atu2630 -0.5 -2.1 hypothetical protein compare
Atu4614 -0.5 -2.1 glycosyltransferase compare
Atu2073 -0.5 -1.3 membrane protein compare
Atu8029 -0.5 -0.8 hypothetical protein compare
Atu3627 -0.5 -1.1 hypothetical protein compare
Atu1380 -0.5 -2.1 zinc metallopeptidase compare
Atu1525 -0.5 -1.8 hypothetical protein compare
Atu1173 -0.5 -2.3 MFS permease compare
Atu2194 -0.5 -1.9 hypothetical protein compare
Atu0185 -0.5 -1.2 methylglyoxal synthase compare
Atu2183 -0.5 -2.4 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0966 -0.5 -0.8 hypothetical protein compare
Atu1021 -0.5 -0.7 outer membrane protein compare
Atu0825 -0.5 -2.7 quinone oxidoreductase compare
Atu3311 -0.5 -3.2 phosphomannose isomerase compare
Atu1311 -0.5 -2.1 acetyltransferase compare
Atu2475 -0.5 -1.4 ABC transporter, membrane spanning protein compare
Atu6107 -0.5 -1.0 hypothetical protein compare
Atu8018 -0.5 -0.4 hypothetical protein compare
Atu3680 -0.5 -2.2 siderophore biosynthesis protein compare
Atu2052 -0.5 -1.9 hypothetical protein compare
Atu0399 -0.5 -1.6 dihydroorotase compare
Atu1204 -0.5 -1.9 potassium uptake protein compare
Atu2069 -0.5 -1.0 hypothetical protein compare
Atu4666 -0.5 -1.9 HlyD family secretion protein compare
Atu2420 -0.4 -1.5 hypothetical protein compare
Atu6179 -0.4 -1.8 virA/G regulated protein compare
Atu0983 -0.4 -0.8 hypothetical protein compare
Atu0861 -0.4 -0.6 hypothetical protein compare
Atu0280 -0.4 -1.0 hypothetical protein compare
Atu1213 -0.4 -0.9 hypothetical protein compare
Atu0769 -0.4 -0.4 protoheme IX farnesyltransferase compare
Atu1793 -0.4 -2.5 phosphatidylcholine synthase compare
Atu1346 -0.4 -2.4 phenazine antibiotic biosynthesis related protein compare
Atu1515 -0.4 -2.0 hypothetical protein compare
Atu3120 -0.4 -0.6 hypothetical protein compare
Atu1467 -0.4 -1.1 hypothetical protein compare
Atu1415 -0.4 -1.7 3-hydroxyacyl-CoA dehydrogenase type II compare
Atu5468 -0.4 -0.7 hypothetical protein compare
Atu1902 -0.4 -2.1 transketolase compare
Atu5115 -0.4 -0.7 hypothetical protein compare
Atu1351 -0.4 -1.5 hypothetical protein compare
Atu2166 -0.4 -1.9 hypothetical protein compare
Atu4166 -0.4 -1.0 UDP-glucose 4-epimerase compare
Atu4234 -0.4 -1.2 amino acid ABC transporter permease compare
Atu4040 -0.4 -1.0 hypothetical protein compare
Atu0865 -0.4 -2.1 transcriptional regulator, AraC family compare
Atu3619 -0.4 -0.9 hypothetical protein compare
Atu3391 -0.4 -2.4 ABC transporter substrate-binding protein compare
Atu1220 -0.4 -1.9 methylated-DNA--protein-cysteine methyltransferase compare


Specific Phenotypes

For 10 genes in this experiment

For phage kan in Agrobacterium fabrum C58

For phage kan across organisms