Experiment set21IT086 for Pseudomonas simiae WCS417

Compare to:

growth on LB_noSalt plate

200 most important genes:

  gene name fitness t score description  
PS417_27800 -4.4 -8.0 exodeoxyribonuclease III compare
PS417_18310 -3.4 -4.1 hypothetical protein compare
PS417_01915 -3.3 -1.7 ATP-dependent protease ATP-binding subunit HslU compare
PS417_04650 -3.2 -1.4 D-alanine--D-alanine ligase compare
PS417_01920 -3.2 -2.9 ATP-dependent protease subunit HslV compare
PS417_27865 -2.9 -4.7 LysR family transcriptional regulator compare
PS417_22565 -2.4 -2.2 formyltetrahydrofolate deformylase compare
PS417_00045 -2.4 -3.2 glycerol acyltransferase compare
PS417_06375 -2.3 -1.4 deoxycytidine triphosphate deaminase compare
PS417_27795 -2.3 -1.4 orotate phosphoribosyltransferase compare
PS417_04365 -2.2 -1.4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_02280 -2.1 -2.8 GlcNAc-PI de-N-acetylase compare
PS417_06680 -2.1 -11.0 nuclease PIN compare
PS417_08125 -2.0 -1.6 prephenate dehydratase compare
PS417_16310 -1.9 -7.6 membrane protein compare
PS417_23775 -1.9 -2.7 exodeoxyribonuclease V subunit beta compare
PS417_20985 -1.9 -2.5 porin compare
PS417_07565 -1.9 -3.1 hypothetical protein compare
PS417_26990 -1.8 -1.8 RNA pyrophosphohydrolase compare
PS417_06600 -1.8 -1.5 leucine/isoleucine/valine transporter ATP-binding subunit compare
PS417_02485 -1.7 -3.4 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_23545 -1.7 -2.6 gamma-glutamyl kinase compare
PS417_27195 -1.7 -1.6 N-acetylglutamate synthase compare
PS417_24745 -1.7 -2.7 gamma-glutamyl phosphate reductase compare
PS417_23915 -1.6 -6.0 pantoate--beta-alanine ligase compare
PS417_17945 -1.6 -1.5 hypothetical protein compare
PS417_04590 -1.6 -5.4 methyltransferase compare
PS417_02975 -1.5 -3.7 3-dehydroquinate dehydratase compare
PS417_08620 -1.5 -1.6 hypothetical protein compare
PS417_08135 -1.4 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_21630 -1.4 -2.2 magnesium transporter compare
PS417_03260 -1.4 -2.5 5S ribosomal RNA compare
PS417_02270 -1.4 -3.6 carbamoyltransferase compare
PS417_07170 -1.4 -6.6 hypothetical protein compare
PS417_09325 -1.4 -5.1 peptidase S41 compare
PS417_28070 -1.4 -6.0 phosphate ABC transporter ATP-binding protein compare
PS417_22520 -1.4 -2.2 histidine kinase compare
PS417_11705 -1.3 -7.7 cyclic peptide transporter compare
PS417_17215 -1.3 -2.8 peptidylprolyl isomerase compare
PS417_23205 -1.2 -2.0 transcriptional regulator compare
PS417_24710 -1.2 -6.0 lipoprotein compare
PS417_24155 -1.2 -1.7 ATP-binding protein compare
PS417_01605 -1.2 -1.4 phosphoglycerate mutase compare
PS417_24500 -1.2 -3.5 DEAD/DEAH box helicase compare
PS417_27870 -1.1 -4.1 ATP-dependent DNA helicase RecG compare
PS417_12585 -1.1 -6.2 acriflavine resistance protein B compare
PS417_19350 -1.1 -3.4 GTP cyclohydrolase compare
PS417_19955 -1.1 -2.4 hypothetical protein compare
PS417_28230 -1.1 -2.3 transcriptional regulator compare
PS417_27510 -1.1 -4.6 disulfide bond formation protein B compare
PS417_21430 -1.1 -2.7 3-oxoacyl-ACP synthase compare
PS417_10095 -1.1 -2.3 hypothetical protein compare
PS417_15095 -1.0 -2.2 hypothetical protein compare
PS417_20855 -1.0 -1.5 hypothetical protein compare
PS417_03495 -1.0 -2.4 type III secretory protein EscS compare
PS417_27640 -1.0 -1.7 TetR family transcriptional regulator compare
PS417_01290 -1.0 -1.4 ADP-ribose diphosphatase compare
PS417_06685 -1.0 -1.1 beta-ketoadipyl CoA thiolase compare
PS417_18635 -1.0 -2.8 4-hydroxybenzoyl-CoA thioesterase compare
PS417_24615 -1.0 -1.4 hypothetical protein compare
PS417_06530 -1.0 -2.3 membrane protein compare
PS417_18710 -1.0 -6.2 hypothetical protein compare
PS417_28080 -1.0 -6.6 phosphate ABC transporter permease compare
PS417_27245 -1.0 -4.6 aminotransferase DegT compare
PS417_20610 -1.0 -1.1 hypothetical protein compare
PS417_02555 -1.0 -7.1 exoribonuclease R compare
PS417_22445 -1.0 -4.3 ATP-dependent DNA helicase RuvB compare
PS417_06100 -1.0 -1.9 SAM-dependent methyltransferase compare
PS417_23375 -1.0 -2.1 cytochrome C oxidase compare
PS417_03100 -0.9 -1.2 pilus assembly protein compare
PS417_25315 -0.9 -3.1 membrane protein compare
PS417_02475 -0.9 -1.8 N-acetylmuramoyl-L-alanine amidase compare
PS417_22450 -0.9 -0.9 ATP-dependent DNA helicase RuvA compare
PS417_01270 -0.9 -1.8 iron ABC transporter substrate-binding protein compare
PS417_24525 -0.9 -2.0 nuclease compare
PS417_24935 -0.9 -1.1 hypothetical protein compare
PS417_24705 -0.9 -2.8 D-alanyl-D-alanine carboxypeptidase compare
PS417_05365 -0.9 -2.0 FAD-binding protein compare
PS417_09470 -0.9 -1.0 hypothetical protein compare
PS417_23380 -0.9 -2.5 cytochrome o ubiquinol oxidase subunit III compare
PS417_17860 -0.9 -2.7 2-oxo-hepta-3-ene-1,7-dioate hydratase compare
PS417_17635 -0.9 -4.2 hemolysin secretion protein D compare
PS417_03300 -0.9 -3.4 alanine acetyltransferase compare
PS417_00220 -0.9 -1.1 hypothetical protein compare
PS417_08130 -0.9 -1.7 aspartate aminotransferase compare
PS417_14760 -0.8 -3.6 membrane protein compare
PS417_08540 -0.8 -2.3 RNA helicase compare
PS417_23370 -0.8 -4.2 protoheme IX farnesyltransferase compare
PS417_21480 -0.8 -1.1 23S rRNA pseudouridylate synthase compare
PS417_23385 -0.8 -4.2 cytochrome o ubiquinol oxidase subunit I compare
PS417_15100 -0.8 -2.0 BatB protein compare
PS417_23390 -0.8 -4.0 ubiquinol oxidase subunit II compare
PS417_04585 -0.8 -1.5 hypothetical protein compare
PS417_15035 -0.8 -1.4 alkylhydroperoxidase compare
PS417_20930 -0.8 -4.2 50S rRNA methyltransferase compare
PS417_15325 -0.8 -1.1 type VI secretion protein compare
PS417_07875 -0.8 -0.9 hypothetical protein compare
PS417_21320 -0.8 -3.0 transcriptional regulator compare
PS417_04170 -0.8 -3.5 stringent starvation protein A compare
PS417_10675 -0.8 -1.1 TetR family transcriptional regulator compare
PS417_26530 -0.8 -1.4 hypothetical protein compare
PS417_00550 -0.8 -1.0 hypothetical protein compare
PS417_00185 -0.8 -2.2 tryptophan synthase subunit beta compare
PS417_13050 -0.8 -2.2 N-acetylglucosamine-6-sulfatase compare
PS417_11810 -0.8 -2.3 oxidoreductase compare
PS417_00190 -0.8 -2.0 LysR family transcriptional regulator compare
PS417_07710 -0.8 -4.6 membrane protein compare
PS417_00355 -0.8 -1.9 metal ABC transporter permease compare
PS417_14755 -0.8 -2.0 UV damage repair endonuclease UvdE compare
PS417_22085 -0.7 -1.7 aldehyde dehydrogenase compare
PS417_27105 -0.7 -3.0 spermidine/putrescine ABC transporter permease compare
PS417_18205 -0.7 -1.7 aldehyde dehydrogenase compare
PS417_08245 -0.7 -1.0 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_05815 -0.7 -2.5 recombinase RecA compare
PS417_07120 -0.7 -4.1 RNA polymerase sigma-H factor compare
PS417_15935 -0.7 -2.0 Rrf2 family transcriptional regulator compare
PS417_04380 -0.7 -1.1 ABC transporter permease compare
PS417_19520 -0.7 -1.9 transcriptional regulator compare
PS417_26660 -0.7 -3.2 protein PilI compare
PS417_21070 -0.7 -2.0 aconitate hydratase compare
PS417_07820 -0.7 -1.4 transposase compare
PS417_22840 -0.7 -1.4 tRNA-Met compare
PS417_08410 -0.7 -2.4 hypothetical protein compare
PS417_22115 -0.7 -2.2 transcriptional regulator compare
PS417_10455 -0.7 -2.2 membrane protein compare
PS417_22205 -0.7 -3.6 potassium transporter TrkH compare
PS417_26240 -0.7 -1.5 N-methylproline demethylase compare
PS417_10600 -0.7 -1.7 hypothetical protein compare
PS417_03785 -0.7 -1.4 pilus assembly protein PilV compare
PS417_12855 -0.7 -2.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_06770 -0.7 -2.3 multidrug transporter compare
PS417_02070 -0.7 -0.9 membrane protein compare
PS417_13235 -0.7 -2.0 siderophore biosynthesis protein compare
PS417_00080 -0.7 -4.7 potassium transporter peripheral membrane component compare
PS417_20140 -0.7 -1.9 nucleoprotein/polynucleotide-associated enzyme compare
PS417_04375 -0.7 -1.9 ABC transporter ATP-binding protein compare
PS417_11965 -0.7 -1.4 GCN5 family acetyltransferase compare
PS417_11400 -0.7 -1.1 phosphoglycerate mutase compare
PS417_03560 -0.7 -1.8 GTP-binding protein compare
PS417_04290 -0.7 -2.9 hypothetical protein compare
PS417_15110 -0.7 -2.6 protein BatD compare
PS417_26650 -0.7 -4.9 histidine kinase compare
PS417_13305 -0.6 -1.0 hypothetical protein compare
PS417_14395 -0.6 -2.1 fe2+ zn2+ uptake regulation protein compare
PS417_22705 -0.6 -1.6 glycerol-3-phosphate ABC transporter substrate-binding protein compare
PS417_08230 -0.6 -2.0 lipopolysaccharide biosynthesis protein RfbH compare
PS417_11615 -0.6 -1.2 urea ABC transporter ATP-binding protein compare
PS417_06370 -0.6 -1.1 cold-shock protein compare
PS417_09600 -0.6 -2.1 glycosyl transferase family 1 compare
PS417_02880 -0.6 -1.3 copper chaperone compare
PS417_09590 -0.6 -2.6 membrane protein compare
PS417_05165 -0.6 -1.9 cytosol aminopeptidase compare
PS417_00590 -0.6 -1.5 5S ribosomal RNA compare
PS417_04835 -0.6 -1.2 hemolysin D compare
PS417_12380 -0.6 -2.4 peptidase S54 compare
PS417_01145 -0.6 -0.8 taurine transporter ATP-binding subunit compare
PS417_08730 -0.6 -1.8 cytochrome C compare
PS417_13640 -0.6 -0.9 ribose ABC transporter permease compare
PS417_23770 -0.6 -1.5 exodeoxyribonuclease V subunit alpha compare
PS417_26850 -0.6 -0.7 twin-arginine translocation pathway signal protein compare
PS417_10520 -0.6 -2.3 succinyl-CoA:3-ketoacid-CoA transferase compare
PS417_18070 -0.6 -0.8 general secretion pathway protein GspH compare
PS417_07245 -0.6 -1.4 2-deoxy-D-ribonate 3-dehydrogenase (from data) compare
PS417_11015 -0.6 -1.5 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) compare
PS417_08665 -0.6 -2.3 molybdopterin-guanine dinucleotide biosynthesis protein A compare
PS417_10335 -0.6 -1.6 peroxiredoxin compare
PS417_23095 -0.6 -0.8 exodeoxyribonuclease compare
PS417_17240 -0.6 -2.2 trigger factor compare
PS417_11535 -0.6 -1.7 nicotinate phosphoribosyltransferase compare
PS417_08575 -0.6 -2.6 MarR family transcriptional regulator compare
PS417_06150 -0.6 -1.6 SAM-dependent methlyltransferase compare
PS417_08170 -0.6 -4.1 capsular biosynthesis protein compare
PS417_03385 -0.6 -1.1 flavin reductase compare
PS417_17405 -0.6 -1.1 AraC family transcriptional regulator compare
PS417_08160 -0.6 -1.5 hypothetical protein compare
PS417_15655 -0.6 -1.9 hypothetical protein compare
PS417_18435 -0.6 -1.3 hypothetical protein compare
PS417_17980 -0.6 -1.5 ABC transporter permease compare
PS417_22690 -0.6 -1.2 phosphogluconate dehydratase compare
PS417_05820 -0.6 -0.9 recombinase RecX compare
PS417_13010 -0.6 -1.4 alpha/beta hydrolase compare
PS417_01955 -0.6 -3.7 peptidase compare
PS417_07615 -0.6 -2.1 TetR family transcriptional regulator compare
PS417_27125 -0.6 -2.9 spermidine/putrescine ABC transporter substrate-binding protein compare
PS417_08545 -0.6 -1.2 aromatic ring-opening dioxygenase LigB compare
PS417_06710 -0.6 -1.2 beta-ketoadipyl CoA thiolase compare
PS417_27940 -0.6 -1.1 type VI secretion protein compare
PS417_06945 -0.6 -0.8 membrane protein compare
PS417_09305 -0.6 -1.9 hypothetical protein compare
PS417_01585 -0.6 -2.6 amino acid ABC transporter substrate-binding protein compare
PS417_04210 -0.5 -2.7 Galactarate dehydratase (EC 4.2.1.42) (from data) compare
PS417_07595 -0.5 -2.4 PasA protein compare
PS417_04385 -0.5 -1.5 organic solvent ABC transporter substrate-binding protein compare
PS417_06835 -0.5 -1.2 phospholipase compare
PS417_07695 -0.5 -3.3 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
PS417_08225 -0.5 -1.4 acetolactate synthase compare
PS417_01310 -0.5 -2.1 ATPase compare
PS417_22535 -0.5 -3.2 ornithine acetyltransferase compare
PS417_15105 -0.5 -2.6 membrane protein compare
PS417_16535 -0.5 -1.6 NUDIX hydrolase compare


Specific Phenotypes

For 1 genes in this experiment