Experiment set20S610 for Agrobacterium fabrum C58

Compare to:

Phage 100.3 + bacteria replicate 1

200 most important genes:

  gene name fitness t score description  
Atu4610 -4.6 -16.6 sugar nucleotide epimerase/dehydratase compare
Atu4609 -4.5 -20.9 glycosyltransferase compare
Atu4608 -3.9 -13.8 hypothetical protein compare
Atu0189 -3.1 -6.4 ABC transporter, membrane spanning protein (peptide) compare
Atu0184 -2.9 -2.8 glucokinase compare
Atu2125 -2.6 -1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu2616 -2.5 -18.3 hypothetical protein compare
Atu1774 -2.5 -11.3 ABC transporter, substrate binding protein (peptide) compare
Atu1030 -2.5 -2.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0190 -2.5 -10.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2073 -2.4 -3.9 membrane protein compare
Atu0769 -2.4 -2.2 protoheme IX farnesyltransferase compare
Atu0141 -2.3 -1.8 cytochrome O ubiquinol oxidase subunit I compare
Atu2615 -2.2 -15.1 hypothetical protein compare
Atu0188 -2.2 -6.5 ABC transporter, membrane spanning protein (peptide) compare
Atu3730 -2.1 -2.1 hypothetical protein compare
Atu0434 -2.1 -2.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1739 -2.0 -3.2 permease compare
Atu3598 -2.0 -1.3 thiol:disulfide interchange protein compare
Atu3469 -2.0 -2.2 phosphoglyceromutase compare
Atu3763 -1.8 -2.1 hypothetical protein compare
Atu3017 -1.8 -2.2 phosphoglyceromutase compare
Atu3001 -1.8 -4.0 hypothetical protein compare
Atu4897 -1.7 -3.4 hypothetical protein compare
Atu0257 -1.7 -9.1 hypothetical protein compare
Atu4896 -1.7 -4.8 acetyltransferase compare
Atu3009 -1.6 -1.6 exopolysaccharide production protein compare
Atu3012 -1.6 -2.6 hypothetical protein compare
Atu0843 -1.5 -11.4 P type cation (metal) transporter, ATPase component compare
Atu0464 -1.5 -9.2 hypothetical protein compare
Atu4894 -1.5 -8.0 transposase compare
Atu1327 -1.4 -3.2 NADH-ubiquinone oxidoreductase compare
Atu4072 -1.4 -1.6 nodulation protein N compare
Atu0422 -1.4 -2.2 ABC transporter, membrane spanning protein compare
Atu1359 -1.4 -1.4 dnaK deletion suppressor protein compare
Atu4890 -1.4 -3.1 IS426 transposase compare
Atu3010 -1.4 -7.2 hypothetical protein compare
Atu4888 -1.4 -5.6 hypothetical protein compare
Atu4892 -1.3 -10.3 hypothetical protein compare
Atu0463 -1.3 -5.3 hypothetical protein compare
Atu0450 -1.3 -8.9 transcription antitermination protein compare
Atu1364 -1.3 -3.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu8202 -1.3 -5.1 hypothetical protein compare
Atu3006 -1.3 -5.3 hypothetical protein compare
Atu0535 -1.3 -4.2 hypothetical protein compare
Atu4711 -1.2 -4.4 two component sensor kinase compare
Atu4882 -1.2 -2.5 hypothetical protein compare
Atu1573 -1.2 -1.9 hypothetical protein compare
Atu1285 -1.2 -6.1 metal dependent hydrolase compare
Atu0842 -1.2 -2.1 hypothetical protein compare
Atu2207 -1.2 -2.6 two component sensor kinase compare
Atu0784 -1.2 -2.1 hypothetical protein compare
Atu0050 -1.1 -4.3 two component response regulator compare
Atu2728 -1.1 -2.9 beta (1-->2) glucan export ATP-binding protein compare
Atu0895 -1.1 -3.3 ABC transporter, substrate binding protein compare
Atu3018 -1.1 -3.4 hypothetical protein compare
Atu1468 -1.1 -4.2 hypothetical protein compare
Atu4217 -1.1 -1.4 TetR family transcriptional regulator compare
Atu4893 -1.1 -5.1 hypothetical protein compare
Atu8167 -1.1 -7.6 putative transmembrane protein compare
Atu4884 -1.1 -3.7 hypothetical protein compare
Atu1629 -1.1 -1.7 transcriptional regulator, ArsR family compare
Atu1339 -1.0 -1.7 ribonuclease E compare
Atu0470 -1.0 -3.0 hypothetical protein compare
Atu8127 -1.0 -9.0 hypothetical protein compare
Atu0454 -1.0 -8.4 hypothetical protein compare
Atu1163 -1.0 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0971 -1.0 -2.5 two component sensor kinase compare
Atu0437 -1.0 -7.4 hypothetical protein compare
Atu0467 -1.0 -1.8 hypothetical protein compare
Atu3008 -1.0 -1.1 hypothetical protein compare
Atu0460 -1.0 -6.2 hypothetical protein compare
Atu0457 -1.0 -8.2 hypothetical protein compare
Atu3016 -1.0 -5.0 phosphoglyceromutase compare
Atu0453 -1.0 -7.2 hypothetical protein compare
Atu4889 -1.0 -5.3 hypothetical protein compare
Atu1470 -1.0 -1.5 Camphor resistance protein compare
Atu4099 -1.0 -5.6 hypothetical protein compare
Atu0461 -1.0 -7.0 hypothetical protein compare
Atu8128 -1.0 -6.5 putative bacteriophage P2 tail protein compare
Atu1793 -0.9 -4.5 phosphatidylcholine synthase compare
Atu0435 -0.9 -1.7 tRNA-Gly compare
Atu2722 -0.9 -4.1 porin compare
Atu0469 -0.9 -4.4 hypothetical protein compare
Atu8125 -0.9 -6.3 hypothetical protein compare
Atu3011 -0.9 -2.9 ArsR family transcriptional regulator compare
Atu0452 -0.9 -5.8 hypothetical protein compare
Atu3014 -0.9 -1.3 hypothetical protein compare
Atu0436 -0.9 -6.9 hypothetical protein compare
Atu0142 -0.9 -1.6 cytochrome o ubiquinol oxidase subunit II compare
Atu4880 -0.9 -6.4 AraC family transcriptional regulator compare
Atu0458 -0.9 -5.2 hypothetical protein compare
Atu0977 -0.9 -2.3 serine protease DO-like protease compare
Atu3019 -0.9 -5.4 hypothetical protein compare
Atu3013 -0.9 -4.0 hypothetical protein compare
Atu0846 -0.9 -2.7 transcriptional regulator, MarR family compare
Atu2057 -0.8 -1.6 DNA helicase II compare
Atu0269 -0.8 -3.4 exodeoxyribonuclease VII large subunit compare
Atu4879 -0.8 -3.8 hypothetical protein compare
Atu8083 -0.8 -6.9 hypothetical protein compare
Atu4502 -0.8 -4.4 cobalamin synthesis protein compare
Atu2077 -0.8 -2.7 DNA polymerase III, epsilon subunit compare
Atu6189 -0.8 -1.1 protein secretion chaperone compare
Atu3020 -0.8 -5.3 GntR family transcriptional regulator compare
Atu4876 -0.8 -6.5 oxidoreductase compare
Atu4773 -0.8 -1.2 two component response regulator compare
Atu3023 -0.8 -5.5 sugar ABC transporter permease compare
Atu4501 -0.8 -3.9 hypothetical protein compare
Atu1535 -0.8 -2.0 cytochrome c oxidase, FixQ chain compare
Atu0106 -0.8 -1.5 cold shock protein compare
Atu0468 -0.8 -4.6 hypothetical protein compare
Atu0331 -0.8 -1.2 sigma-54 modulation protein compare
Atu2692 -0.8 -3.1 intracellular septation protein compare
Atu3015 -0.8 -3.8 hypothetical protein compare
Atu3613 -0.8 -3.8 hypothetical protein compare
Atu1019 -0.8 -2.6 hypothetical protein compare
Atu4878 -0.8 -3.2 hypothetical protein compare
Atu2058 -0.7 -3.0 hypothetical protein compare
Atu1182 -0.7 -1.2 hypothetical protein compare
Atu4317 -0.7 -1.0 TetR family transcriptional regulator compare
Atu1446 -0.7 -0.5 two component response regulator compare
Atu8126 -0.7 -4.6 putative phage tail protein I compare
Atu8087 -0.7 -1.2 putative peptidoglycan binding protein compare
Atu3739 -0.7 -1.7 phosphoglycerate kinase compare
Atu0030 -0.7 -1.7 phosphocarrier protein HPr compare
Atu3910 -0.7 -3.0 LamB/YcsF family protein compare
Atu0462 -0.7 -5.3 endolysin compare
Atu4877 -0.7 -4.6 short-chain dehydrogenase compare
Atu0419 -0.7 -2.0 two component sensor kinase compare
Atu1602 -0.7 -2.9 transcriptional activator, Crp family compare
Atu0025 -0.7 -2.0 hypothetical protein compare
Atu0388 -0.7 -5.2 two component sensor kinase compare
Atu4887 -0.7 -2.5 hypothetical protein compare
Atu0051 -0.7 -2.6 two component sensor kinase compare
Atu1588 -0.7 -3.9 homoserine dehydrogenase compare
Atu0413 -0.7 -2.1 stress induced protein compare
Atu4868 -0.7 -4.8 oxidoreductase compare
Atu3890 -0.7 -4.3 glycerol kinase compare
Atu3021 -0.7 -4.2 sugar ABC transporter ATPase compare
Atu3609 -0.7 -2.9 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu3026 -0.7 -3.8 short chain dehydrogenase compare
Atu4873 -0.7 -4.1 TetR family transcriptional regulator compare
Atu0499 -0.7 -3.8 hypothetical protein compare
Atu0101 -0.7 -2.2 cytochrome c compare
Atu3024 -0.7 -4.6 sugar ABC transporter permease compare
Atu2117 -0.7 -2.4 lytic murein transglycosylase compare
Atu2802 -0.7 -2.7 precorrin-8X methylmutase compare
Atu4874 -0.7 -4.2 hypothetical protein compare
Atu1291 -0.7 -1.9 hypothetical protein compare
Atu2237 -0.7 -1.7 cytochrome c1 compare
Atu4108 -0.7 -4.7 ribonuclease D compare
Atu4881 -0.7 -3.3 hypothetical protein compare
Atu2807 -0.7 -3.1 cob(I)alamin adenosyltransferase compare
Atu3025 -0.6 -5.5 oligo alginate lyase compare
Atu4854 -0.6 -3.5 hypothetical protein compare
Atu2803 -0.6 -2.5 Cobalamin biosynthesis associated protein compare
Atu0925 -0.6 -2.4 hypothetical protein compare
Atu4669 -0.6 -3.8 hypothetical protein compare
Atu1904 -0.6 -2.4 transcriptional regulator compare
Atu2217 -0.6 -2.8 hypothetical protein compare
Atu4857 -0.6 -4.1 mobilization protein C compare
Atu0981 -0.6 -4.7 glutamate-ammonia-ligase adenylyltransferase compare
Atu8158 -0.6 -1.6 hypothetical protein compare
Atu2052 -0.6 -2.9 hypothetical protein compare
Atu3628 -0.6 -2.2 hypothetical protein compare
Atu3697 -0.6 -2.1 ATP-dependent protease LA 2 compare
Atu6138 -0.6 -2.0 Repressor of the acc and arc operons compare
Atu0480 -0.6 -3.8 polysaccharide biosynthesis protein compare
Atu4677 -0.6 -1.2 hypothetical protein compare
Atu3744 -0.6 -3.6 ABC transporter permease compare
Atu3537 -0.6 -2.3 hypothetical protein compare
Atu0888 -0.6 -3.3 transcriptional regulator, MerR family compare
Atu0893 -0.6 -2.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu2799 -0.6 -2.1 precorrin-6x reductase compare
Atu3893 -0.6 -3.4 sugarl ABC transporter permease compare
Atu2017 -0.6 -0.8 hypothetical protein compare
Atu0400 -0.6 -1.6 orotate phosphoribosyltransferase compare
Atu0986 -0.6 -0.9 hypothetical protein compare
Atu2634 -0.6 -1.1 hypothetical protein compare
Atu4860 -0.6 -3.8 hypothetical protein compare
Atu1542 -0.6 -3.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3400 -0.6 -1.5 hypothetical protein compare
Atu1286 -0.6 -1.7 hypothetical protein compare
Atu2768 -0.6 -2.9 hypothetical protein compare
Atu4161 -0.6 -1.1 hypothetical protein compare
Atu3034 -0.5 -2.8 ROK family transcriptional regulator compare
Atu3579 -0.5 -1.7 lactoylglutathione lyase compare
Atu3604 -0.5 -2.0 hypoxanthine phosphoribosyltransferase compare
Atu1484 -0.5 -1.3 transcriptional regulator compare
Atu0015 -0.5 -2.9 intracellular PHB depolymerase compare
Atu2772 -0.5 -2.4 Invasion protein A compare
Atu3895 -0.5 -4.1 sugar ABC transporter ATPase compare
Atu1466 -0.5 -1.2 hypothetical protein compare
Atu1891 -0.5 -1.2 cobalamin biosynthesis protein compare
Atu3029 -0.5 -3.2 glucarate dehydratase compare
Atu3894 -0.5 -3.9 sugar ABC transporter permease compare
Atu0666 -0.5 -2.7 glycolate oxidase subunit compare
Atu1528 -0.5 -3.2 nitrogen fixation protein FixI compare
Atu8093 -0.5 -2.7 hypothetical protein compare
Atu0357 -0.5 -2.8 phosphate starvation inducible protein compare


Specific Phenotypes

For 2 genes in this experiment