Experiment set20S609 for Agrobacterium fabrum C58

Compare to:

Phage 100.2 + bactiera replicate 3

200 most important genes:

  gene name fitness t score description  
Atu4610 -4.9 -16.0 sugar nucleotide epimerase/dehydratase compare
Atu4609 -4.5 -19.9 glycosyltransferase compare
Atu4608 -3.9 -13.1 hypothetical protein compare
Atu1030 -3.3 -2.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3017 -3.2 -2.5 phosphoglyceromutase compare
Atu4896 -2.8 -3.9 acetyltransferase compare
Atu1359 -2.8 -1.7 dnaK deletion suppressor protein compare
Atu3730 -2.7 -2.0 hypothetical protein compare
Atu2073 -2.7 -3.6 membrane protein compare
Atu0188 -2.6 -4.7 ABC transporter, membrane spanning protein (peptide) compare
Atu2616 -2.5 -14.8 hypothetical protein compare
Atu1739 -2.3 -3.7 permease compare
Atu0190 -2.3 -11.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1774 -2.3 -11.5 ABC transporter, substrate binding protein (peptide) compare
Atu4897 -2.3 -2.8 hypothetical protein compare
Atu4072 -2.2 -1.9 nodulation protein N compare
Atu1364 -2.2 -4.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2057 -2.1 -3.2 DNA helicase II compare
Atu3001 -2.1 -3.5 hypothetical protein compare
Atu0434 -2.1 -2.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0189 -2.1 -4.5 ABC transporter, membrane spanning protein (peptide) compare
Atu2615 -2.1 -14.2 hypothetical protein compare
Atu0535 -2.0 -5.4 hypothetical protein compare
Atu1163 -2.0 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4317 -1.9 -2.2 TetR family transcriptional regulator compare
Atu3598 -1.9 -1.3 thiol:disulfide interchange protein compare
Atu1327 -1.8 -3.3 NADH-ubiquinone oxidoreductase compare
Atu3005 -1.8 -1.5 hypothetical protein compare
Atu3006 -1.8 -6.2 hypothetical protein compare
Atu0464 -1.7 -11.2 hypothetical protein compare
Atu6189 -1.7 -2.1 protein secretion chaperone compare
Atu4217 -1.7 -1.3 TetR family transcriptional regulator compare
Atu3011 -1.7 -4.6 ArsR family transcriptional regulator compare
Atu0846 -1.6 -4.5 transcriptional regulator, MarR family compare
Atu0971 -1.6 -3.0 two component sensor kinase compare
Atu0977 -1.6 -3.3 serine protease DO-like protease compare
Atu3009 -1.6 -2.0 exopolysaccharide production protein compare
Atu0257 -1.5 -8.9 hypothetical protein compare
Atu0842 -1.5 -1.9 hypothetical protein compare
Atu3012 -1.4 -2.6 hypothetical protein compare
Atu0450 -1.4 -9.0 transcription antitermination protein compare
Atu0142 -1.4 -3.2 cytochrome o ubiquinol oxidase subunit II compare
Atu1468 -1.4 -4.6 hypothetical protein compare
Atu4894 -1.4 -8.2 transposase compare
Atu1602 -1.4 -4.3 transcriptional activator, Crp family compare
Atu1891 -1.4 -2.9 cobalamin biosynthesis protein compare
Atu1838 -1.3 -4.2 ABC transporter, substrate binding protein (amino acid) compare
Atu4502 -1.3 -5.1 cobalamin synthesis protein compare
Atu1285 -1.3 -4.6 metal dependent hydrolase compare
Atu1566 -1.3 -1.5 hypothetical protein compare
Atu1339 -1.3 -2.7 ribonuclease E compare
Atu4888 -1.2 -5.4 hypothetical protein compare
Atu4890 -1.2 -2.8 IS426 transposase compare
Atu1527 -1.2 -2.5 nitrogen fixation protein FixS compare
Atu8202 -1.2 -4.2 hypothetical protein compare
Atu4892 -1.2 -9.0 hypothetical protein compare
Atu1793 -1.2 -6.2 phosphatidylcholine synthase compare
Atu4893 -1.2 -5.2 hypothetical protein compare
Atu4882 -1.2 -2.3 hypothetical protein compare
Atu3010 -1.2 -7.0 hypothetical protein compare
Atu0912 -1.2 -1.5 Na+/H+ antiporter compare
Atu4099 -1.2 -4.8 hypothetical protein compare
Atu0463 -1.2 -6.6 hypothetical protein compare
Atu4711 -1.2 -5.0 two component sensor kinase compare
Atu2692 -1.2 -3.3 intracellular septation protein compare
Atu0471 -1.2 -2.9 hypothetical protein compare
Atu0895 -1.2 -2.4 ABC transporter, substrate binding protein compare
Atu4887 -1.1 -5.0 hypothetical protein compare
Atu4879 -1.1 -5.3 hypothetical protein compare
Atu0388 -1.1 -7.0 two component sensor kinase compare
Atu4889 -1.1 -5.7 hypothetical protein compare
Atu0050 -1.1 -3.4 two component response regulator compare
Atu4881 -1.1 -5.0 hypothetical protein compare
Atu5430 -1.1 -1.1 hypothetical protein compare
Atu0454 -1.1 -7.4 hypothetical protein compare
Atu8126 -1.1 -6.2 putative phage tail protein I compare
Atu8128 -1.1 -6.6 putative bacteriophage P2 tail protein compare
Atu8167 -1.1 -6.6 putative transmembrane protein compare
Atu1573 -1.1 -1.8 hypothetical protein compare
Atu1629 -1.1 -1.6 transcriptional regulator, ArsR family compare
Atu1307 -1.0 -2.0 dihydroorotase compare
Atu6131 -1.0 -3.2 TraR Antiactivator compare
Atu0457 -1.0 -6.1 hypothetical protein compare
Atu3019 -1.0 -6.8 hypothetical protein compare
Atu4161 -1.0 -1.6 hypothetical protein compare
Atu3008 -1.0 -1.1 hypothetical protein compare
Atu3023 -1.0 -4.9 sugar ABC transporter permease compare
Atu3890 -1.0 -5.1 glycerol kinase compare
Atu8125 -1.0 -7.3 hypothetical protein compare
Atu8083 -1.0 -7.6 hypothetical protein compare
Atu0470 -1.0 -2.7 hypothetical protein compare
Atu6165 -1.0 -1.1 hypothetical protein compare
Atu3015 -1.0 -4.8 hypothetical protein compare
Atu8127 -1.0 -8.5 hypothetical protein compare
Atu0469 -1.0 -7.1 hypothetical protein compare
Atu3468 -1.0 -0.9 hypothetical protein compare
Atu0436 -1.0 -6.7 hypothetical protein compare
Atu0184 -0.9 -1.6 glucokinase compare
Atu4884 -0.9 -2.9 hypothetical protein compare
Atu0461 -0.9 -7.0 hypothetical protein compare
Atu0354 -0.9 -1.9 ferric uptake regulator compare
Atu0468 -0.9 -6.1 hypothetical protein compare
Atu0926 -0.9 -4.2 hypothetical protein compare
Atu0467 -0.9 -4.2 hypothetical protein compare
Atu0925 -0.9 -2.3 hypothetical protein compare
Atu3020 -0.9 -4.6 GntR family transcriptional regulator compare
Atu2239 -0.9 -1.7 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3763 -0.9 -1.3 hypothetical protein compare
Atu3613 -0.9 -4.1 hypothetical protein compare
Atu3609 -0.9 -4.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu3021 -0.9 -5.0 sugar ABC transporter ATPase compare
Atu1470 -0.9 -1.3 Camphor resistance protein compare
Atu0453 -0.9 -6.6 hypothetical protein compare
Atu2768 -0.9 -3.5 hypothetical protein compare
Atu0598 -0.9 -3.9 phosphogluconate dehydratase compare
Atu0460 -0.9 -6.3 hypothetical protein compare
Atu3016 -0.9 -3.7 phosphoglyceromutase compare
Atu0399 -0.9 -2.7 dihydroorotase compare
Atu4501 -0.9 -4.9 hypothetical protein compare
Atu2204 -0.9 -1.7 hypothetical protein compare
Atu4876 -0.9 -5.9 oxidoreductase compare
Atu2052 -0.9 -3.7 hypothetical protein compare
Atu8088 -0.9 -1.9 hypothetical protein compare
Atu4880 -0.9 -5.7 AraC family transcriptional regulator compare
Atu0458 -0.8 -4.8 hypothetical protein compare
Atu0452 -0.8 -5.5 hypothetical protein compare
Atu3026 -0.8 -3.6 short chain dehydrogenase compare
Atu0141 -0.8 -1.3 cytochrome O ubiquinol oxidase subunit I compare
Atu4878 -0.8 -3.1 hypothetical protein compare
Atu8093 -0.8 -3.4 hypothetical protein compare
Atu3022 -0.8 -4.5 sugar ABC transporter permease compare
Atu0533 -0.8 -2.3 putative inhibitor of septum formation compare
Atu1254 -0.8 -1.2 transcriptional regulator, ArsR family compare
Atu1606 -0.8 -3.5 methionine aminopeptidase compare
Atu1836 -0.8 -1.7 hypothetical protein compare
Atu0769 -0.8 -0.9 protoheme IX farnesyltransferase compare
Atu2442 -0.8 -1.5 hypothetical protein compare
Atu3897 -0.8 -5.9 glycerol-3-phosphate dehydrogenase compare
Atu4214 -0.8 -3.4 cold shock protein compare
Atu0941 -0.8 -0.8 hypothetical protein compare
Atu4877 -0.8 -5.6 short-chain dehydrogenase compare
Atu3018 -0.8 -2.6 hypothetical protein compare
Atu0030 -0.8 -1.6 phosphocarrier protein HPr compare
Atu2722 -0.8 -4.2 porin compare
Atu4144 -0.7 -0.9 hypothetical protein compare
Atu1131 -0.7 -4.9 outer membrane protein compare
Atu2728 -0.7 -2.0 beta (1-->2) glucan export ATP-binding protein compare
Atu0499 -0.7 -4.0 hypothetical protein compare
Atu2017 -0.7 -0.9 hypothetical protein compare
Atu1291 -0.7 -1.5 hypothetical protein compare
Atu1542 -0.7 -3.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3013 -0.7 -3.2 hypothetical protein compare
Atu1039 -0.7 -2.1 DNA repair protein RecO compare
Atu1076 -0.7 -2.0 colicin V production protein compare
Atu1182 -0.7 -1.5 hypothetical protein compare
Atu1056 -0.7 -3.7 hypothetical protein compare
Atu0590 -0.7 -4.6 transcriptional regulator repressor compare
Atu0843 -0.7 -6.0 P type cation (metal) transporter, ATPase component compare
Atu3895 -0.7 -4.5 sugar ABC transporter ATPase compare
Atu2217 -0.7 -3.2 hypothetical protein compare
Atu3029 -0.7 -4.5 glucarate dehydratase compare
Atu2306 -0.7 -2.9 methionine aminopeptidase compare
Atu3910 -0.7 -2.9 LamB/YcsF family protein compare
Atu1077 -0.7 -2.1 DNA repair protein compare
Atu2777 -0.7 -3.5 hypothetical protein compare
Atu0225 -0.7 -0.8 hypothetical protein compare
Atu0437 -0.7 -5.2 hypothetical protein compare
Atu0462 -0.7 -4.6 endolysin compare
Atu0767 -0.7 -2.5 cytochrome c oxidase subunit II compare
Atu3014 -0.7 -1.6 hypothetical protein compare
Atu0421 -0.7 -0.7 ABC transporter, membrane spanning protein compare
Atu4874 -0.7 -3.4 hypothetical protein compare
Atu0269 -0.7 -2.1 exodeoxyribonuclease VII large subunit compare
Atu4869 -0.7 -2.2 hypothetical protein compare
Atu1801 -0.7 -2.0 hypothetical protein compare
Atu3893 -0.7 -3.6 sugarl ABC transporter permease compare
Atu2432 -0.7 -1.7 hypothetical protein compare
Atu0357 -0.7 -3.5 phosphate starvation inducible protein compare
Atu0051 -0.6 -2.2 two component sensor kinase compare
Atu4108 -0.6 -3.8 ribonuclease D compare
Atu0400 -0.6 -1.6 orotate phosphoribosyltransferase compare
Atu4870 -0.6 -4.0 NADP-dependent quinone oxidoreductase compare
Atu3886 -0.6 -4.8 lysophospholipase compare
Atu0525 -0.6 -3.3 transcriptional regulator, LuxR family compare
Atu4864 -0.6 -3.3 MarR family transcriptional regulator compare
Atu0049 -0.6 -2.7 hypothetical protein compare
Atu4873 -0.6 -3.6 TetR family transcriptional regulator compare
Atu3467 -0.6 -2.0 hypothetical protein compare
Atu3034 -0.6 -2.6 ROK family transcriptional regulator compare
Atu3628 -0.6 -3.3 hypothetical protein compare
Atu1134 -0.6 -3.9 hypothetical protein compare
Atu3608 -0.6 -2.4 hypothetical protein compare
Atu1286 -0.6 -1.6 hypothetical protein compare
Atu4669 -0.6 -3.7 hypothetical protein compare
Atu0036 -0.6 -1.2 hypothetical protein compare
Atu0904 -0.6 -1.9 hypothetical protein compare
Atu3120 -0.6 -1.0 hypothetical protein compare
Atu3894 -0.6 -3.9 sugar ABC transporter permease compare
Atu0130 -0.6 -2.4 cytidine deaminase compare
Atu1513 -0.6 -2.4 ABC excinuclease subunit A compare


Specific Phenotypes

For 6 genes in this experiment