Experiment set20S608 for Agrobacterium fabrum C58

Compare to:

Phage 100.2 + bactiera replicate 2

200 most important genes:

  gene name fitness t score description  
Atu4610 -4.7 -13.8 sugar nucleotide epimerase/dehydratase compare
Atu4609 -4.4 -19.7 glycosyltransferase compare
Atu0842 -3.8 -3.7 hypothetical protein compare
Atu4608 -3.7 -14.1 hypothetical protein compare
Atu3730 -3.6 -2.4 hypothetical protein compare
Atu2073 -3.3 -3.1 membrane protein compare
Atu3763 -3.2 -2.1 hypothetical protein compare
Atu1359 -2.7 -1.7 dnaK deletion suppressor protein compare
Atu2616 -2.5 -14.7 hypothetical protein compare
Atu4217 -2.5 -1.7 TetR family transcriptional regulator compare
Atu0190 -2.5 -9.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4161 -2.4 -2.4 hypothetical protein compare
Atu1774 -2.3 -13.2 ABC transporter, substrate binding protein (peptide) compare
Atu2615 -2.3 -14.6 hypothetical protein compare
Atu0189 -2.3 -4.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0141 -2.3 -1.8 cytochrome O ubiquinol oxidase subunit I compare
Atu4616 -2.2 -2.8 dTDP-4-dehydrorhamnose reductase compare
Atu1163 -1.9 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3598 -1.9 -1.2 thiol:disulfide interchange protein compare
Atu1468 -1.9 -5.1 hypothetical protein compare
Atu2057 -1.8 -2.6 DNA helicase II compare
Atu1030 -1.8 -1.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4897 -1.8 -3.4 hypothetical protein compare
Atu0188 -1.7 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu1327 -1.7 -3.2 NADH-ubiquinone oxidoreductase compare
Atu1739 -1.7 -2.8 permease compare
Atu0977 -1.7 -2.6 serine protease DO-like protease compare
Atu0257 -1.7 -8.9 hypothetical protein compare
Atu4711 -1.6 -6.4 two component sensor kinase compare
Atu1364 -1.6 -3.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0464 -1.6 -9.3 hypothetical protein compare
Atu0535 -1.5 -3.4 hypothetical protein compare
Atu4502 -1.5 -6.5 cobalamin synthesis protein compare
Atu0971 -1.5 -2.9 two component sensor kinase compare
Atu3009 -1.5 -2.0 exopolysaccharide production protein compare
Atu4099 -1.5 -6.0 hypothetical protein compare
Atu0331 -1.5 -1.9 sigma-54 modulation protein compare
Atu0690 -1.5 -2.1 hypothetical protein compare
Atu4888 -1.4 -4.7 hypothetical protein compare
Atu3006 -1.4 -4.1 hypothetical protein compare
Atu0051 -1.4 -3.8 two component sensor kinase compare
Atu4894 -1.4 -6.2 transposase compare
Atu4896 -1.3 -3.9 acetyltransferase compare
Atu4892 -1.3 -9.3 hypothetical protein compare
Atu1439 -1.3 -2.3 hypothetical protein compare
Atu0450 -1.3 -7.1 transcription antitermination protein compare
Atu0361 -1.3 -2.9 transcriptional regulator compare
Atu4893 -1.3 -6.2 hypothetical protein compare
Atu4890 -1.3 -2.7 IS426 transposase compare
Atu1534 -1.2 -3.3 cytochrome-c oxidase, FixP chain compare
Atu3014 -1.2 -1.7 hypothetical protein compare
Atu3001 -1.2 -3.4 hypothetical protein compare
Atu4072 -1.2 -1.3 nodulation protein N compare
Atu8167 -1.2 -7.1 putative transmembrane protein compare
Atu0050 -1.2 -3.9 two component response regulator compare
Atu2768 -1.2 -4.3 hypothetical protein compare
Atu1182 -1.1 -2.1 hypothetical protein compare
Atu3011 -1.1 -1.9 ArsR family transcriptional regulator compare
Atu0470 -1.1 -2.9 hypothetical protein compare
Atu0471 -1.1 -4.6 hypothetical protein compare
Atu0467 -1.1 -4.1 hypothetical protein compare
Atu2722 -1.1 -5.7 porin compare
Atu3010 -1.1 -5.4 hypothetical protein compare
Atu0388 -1.1 -7.6 two component sensor kinase compare
Atu3012 -1.1 -1.9 hypothetical protein compare
Atu1891 -1.1 -2.3 cobalamin biosynthesis protein compare
Atu4887 -1.1 -4.7 hypothetical protein compare
Atu0422 -1.1 -1.4 ABC transporter, membrane spanning protein compare
Atu1307 -1.1 -2.5 dihydroorotase compare
Atu0457 -1.0 -6.5 hypothetical protein compare
Atu8126 -1.0 -4.9 putative phage tail protein I compare
Atu0925 -1.0 -2.2 hypothetical protein compare
Atu3613 -1.0 -4.6 hypothetical protein compare
Atu0885 -1.0 -3.2 hypothetical protein compare
Atu1968 -1.0 -1.7 hypothetical protein compare
Atu1435 -1.0 -2.7 hypothetical protein compare
Atu4889 -1.0 -5.3 hypothetical protein compare
Atu3015 -1.0 -4.4 hypothetical protein compare
Atu2777 -1.0 -5.3 hypothetical protein compare
Atu0460 -1.0 -6.1 hypothetical protein compare
Atu4882 -1.0 -2.2 hypothetical protein compare
Atu8128 -1.0 -6.7 putative bacteriophage P2 tail protein compare
Atu8127 -1.0 -8.1 hypothetical protein compare
Atu3892 -1.0 -3.5 hypothetical protein compare
Atu3466 -1.0 -2.7 ArsR family transcriptional regulator compare
Atu4317 -1.0 -1.3 TetR family transcriptional regulator compare
Atu3017 -1.0 -1.4 phosphoglyceromutase compare
Atu0458 -1.0 -3.6 hypothetical protein compare
Atu0436 -1.0 -6.8 hypothetical protein compare
Atu2662 -0.9 -1.0 acetyltransferase compare
Atu1339 -0.9 -2.0 ribonuclease E compare
Atu2692 -0.9 -3.5 intracellular septation protein compare
Atu2728 -0.9 -2.2 beta (1-->2) glucan export ATP-binding protein compare
Atu1793 -0.9 -3.3 phosphatidylcholine synthase compare
Atu1896 -0.9 -3.9 hypothetical protein compare
Atu0461 -0.9 -6.7 hypothetical protein compare
Atu0469 -0.9 -4.6 hypothetical protein compare
Atu4884 -0.9 -2.2 hypothetical protein compare
Atu0452 -0.9 -7.0 hypothetical protein compare
Atu4878 -0.9 -3.9 hypothetical protein compare
Atu0101 -0.9 -3.6 cytochrome c compare
Atu8083 -0.9 -7.2 hypothetical protein compare
Atu0184 -0.9 -1.4 glucokinase compare
Atu3016 -0.9 -3.7 phosphoglyceromutase compare
Atu1513 -0.9 -3.1 ABC excinuclease subunit A compare
Atu3031 -0.9 -1.2 hypothetical protein compare
Atu3019 -0.9 -4.3 hypothetical protein compare
Atu1535 -0.9 -2.0 cytochrome c oxidase, FixQ chain compare
Atu0044 -0.9 -4.0 heat shock protein hslV compare
Atu0149 -0.9 -3.4 enoyl-(acyl-carrier-protein) reductase compare
Atu0454 -0.9 -5.4 hypothetical protein compare
Atu0437 -0.9 -4.1 hypothetical protein compare
Atu8202 -0.9 -3.5 hypothetical protein compare
Atu3020 -0.9 -5.3 GntR family transcriptional regulator compare
Atu2117 -0.9 -4.5 lytic murein transglycosylase compare
Atu4669 -0.9 -4.5 hypothetical protein compare
Atu3890 -0.9 -5.0 glycerol kinase compare
Atu8125 -0.8 -6.5 hypothetical protein compare
Atu0045 -0.8 -5.3 heat shock chaperone compare
Atu1285 -0.8 -3.5 metal dependent hydrolase compare
Atu1527 -0.8 -2.2 nitrogen fixation protein FixS compare
Atu0981 -0.8 -5.1 glutamate-ammonia-ligase adenylyltransferase compare
Atu0468 -0.8 -5.7 hypothetical protein compare
Atu3021 -0.8 -5.4 sugar ABC transporter ATPase compare
Atu1880 -0.8 -3.5 ABC transporter, membrane spanning protein (amino acid) compare
Atu0876 -0.8 -1.2 superoxide dismutase compare
Atu3894 -0.8 -4.9 sugar ABC transporter permease compare
Atu4879 -0.8 -3.9 hypothetical protein compare
Atu0130 -0.8 -2.4 cytidine deaminase compare
Atu1904 -0.8 -3.6 transcriptional regulator compare
Atu1467 -0.8 -2.6 hypothetical protein compare
Atu3893 -0.8 -5.2 sugarl ABC transporter permease compare
Atu1570 -0.8 -0.6 hypothetical protein compare
Atu3896 -0.8 -5.2 sugar ABC transporter ATPase compare
Atu0298 -0.8 -2.7 orotidine 5 compare
Atu4501 -0.8 -4.3 hypothetical protein compare
Atu0015 -0.8 -5.2 intracellular PHB depolymerase compare
Atu0590 -0.8 -4.2 transcriptional regulator repressor compare
Atu0142 -0.8 -1.9 cytochrome o ubiquinol oxidase subunit II compare
Atu8191 -0.8 -1.2 hypothetical protein compare
Atu3697 -0.7 -2.1 ATP-dependent protease LA 2 compare
Atu3023 -0.7 -4.3 sugar ABC transporter permease compare
Atu2017 -0.7 -1.0 hypothetical protein compare
Atu1076 -0.7 -2.6 colicin V production protein compare
Atu4346 -0.7 -3.0 hypothetical protein compare
Atu3895 -0.7 -5.0 sugar ABC transporter ATPase compare
Atu6138 -0.7 -2.6 Repressor of the acc and arc operons compare
Atu1021 -0.7 -0.9 outer membrane protein compare
Atu1838 -0.7 -2.8 ABC transporter, substrate binding protein (amino acid) compare
Atu0453 -0.7 -4.3 hypothetical protein compare
Atu3619 -0.7 -2.3 hypothetical protein compare
Atu1602 -0.7 -1.8 transcriptional activator, Crp family compare
Atu1026 -0.7 -1.9 hypothetical protein compare
Atu8138 -0.7 -1.2 hypothetical protein compare
Atu1726 -0.7 -3.1 hypothetical protein compare
Atu0435 -0.7 -1.6 tRNA-Gly compare
Atu3572 -0.7 -3.5 transcriptional regulator compare
Atu3507 -0.7 -2.4 hypothetical protein compare
Atu0843 -0.7 -5.6 P type cation (metal) transporter, ATPase component compare
Atu2217 -0.7 -2.9 hypothetical protein compare
Atu2249 -0.7 -0.8 hypothetical protein compare
Atu1483 -0.7 -2.4 cytochrome b561 compare
Atu0434 -0.7 -1.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2059 -0.7 -3.3 transcriptional regulator, TetR family compare
Atu0269 -0.7 -2.6 exodeoxyribonuclease VII large subunit compare
Atu0893 -0.7 -2.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu8041 -0.7 -1.6 hypothetical protein compare
Atu2306 -0.7 -2.5 methionine aminopeptidase compare
Atu1134 -0.7 -3.6 hypothetical protein compare
Atu5142 -0.7 -1.2 hypothetical protein compare
Atu3044 -0.7 -3.1 asparaginase compare
Atu3897 -0.7 -4.9 glycerol-3-phosphate dehydrogenase compare
Atu0846 -0.7 -1.8 transcriptional regulator, MarR family compare
Atu4876 -0.7 -4.4 oxidoreductase compare
Atu1077 -0.7 -1.9 DNA repair protein compare
Atu1258 -0.7 -2.4 ATP-dependent Clp protease, proteolytic subunit compare
Atu5164 -0.7 -0.6 type IV secretion protein AvhB3 compare
Atu1542 -0.7 -2.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0463 -0.7 -3.9 hypothetical protein compare
Atu0485 -0.7 -2.6 hypothetical protein compare
Atu2614 -0.6 -3.6 hypothetical protein compare
Atu3022 -0.6 -3.9 sugar ABC transporter permease compare
Atu3047 -0.6 -3.1 oligopeptide ABC transporter permease compare
Atu0973 -0.6 -2.6 cycH protein compare
Atu1842 -0.6 -3.3 hypothetical protein compare
Atu1177 -0.6 -1.7 hypothetical protein compare
Atu0912 -0.6 -0.8 Na+/H+ antiporter compare
Atu2001 -0.6 -4.2 excinuclease ABC subunit B compare
Atu2281 -0.6 -2.8 ABC transporter, substrate binding protein (proline/glycine betaine) compare
Atu4877 -0.6 -3.6 short-chain dehydrogenase compare
Atu3018 -0.6 -2.3 hypothetical protein compare
Atu2045 -0.6 -3.0 HFLK protein compare
Atu4865 -0.6 -4.3 oxidoreductase compare
Atu1286 -0.6 -1.6 hypothetical protein compare
Atu1851 -0.6 -1.5 BolA/YrbA family protein compare
Atu1712 -0.6 -4.4 deoxyguanosinetriphosphate triphosphohydrolase compare
Atu0462 -0.6 -3.4 endolysin compare
Atu0030 -0.6 -1.3 phosphocarrier protein HPr compare
Atu4881 -0.6 -3.5 hypothetical protein compare
Atu1528 -0.6 -3.5 nitrogen fixation protein FixI compare


Specific Phenotypes

For 4 genes in this experiment