Experiment set20S596 for Agrobacterium fabrum C58

Compare to:

Phage 99.1 + bacteria replicate 2

200 most important genes:

  gene name fitness t score description  
Atu1774 -2.6 -14.7 ABC transporter, substrate binding protein (peptide) compare
Atu2616 -2.5 -19.1 hypothetical protein compare
Atu2125 -2.5 -1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0434 -2.4 -2.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0189 -2.4 -5.2 ABC transporter, membrane spanning protein (peptide) compare
Atu0188 -2.3 -6.1 ABC transporter, membrane spanning protein (peptide) compare
Atu2615 -2.2 -13.9 hypothetical protein compare
Atu0190 -2.2 -12.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1030 -2.0 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3730 -1.8 -2.0 hypothetical protein compare
Atu4711 -1.7 -4.7 two component sensor kinase compare
Atu2057 -1.7 -2.7 DNA helicase II compare
Atu4896 -1.7 -3.9 acetyltransferase compare
Atu1470 -1.6 -2.3 Camphor resistance protein compare
Atu0843 -1.6 -13.5 P type cation (metal) transporter, ATPase component compare
Atu0769 -1.6 -1.8 protoheme IX farnesyltransferase compare
Atu2728 -1.6 -3.3 beta (1-->2) glucan export ATP-binding protein compare
Atu0464 -1.5 -8.8 hypothetical protein compare
Atu0086 -1.5 -1.3 ribosome-binding factor A compare
Atu3012 -1.5 -2.5 hypothetical protein compare
Atu2073 -1.4 -2.8 membrane protein compare
Atu0450 -1.3 -10.0 transcription antitermination protein compare
Atu2800 -1.3 -3.2 precorrin-3B C17-methyltransferase compare
Atu0454 -1.2 -7.1 hypothetical protein compare
Atu3763 -1.2 -1.5 hypothetical protein compare
Atu0471 -1.2 -2.7 hypothetical protein compare
Atu6098 -1.1 -0.7 transcriptional regulator, HTH family compare
Atu2722 -1.1 -6.1 porin compare
Atu2807 -1.1 -4.6 cob(I)alamin adenosyltransferase compare
Atu1739 -1.0 -2.3 permease compare
Atu8128 -1.0 -6.6 putative bacteriophage P2 tail protein compare
Atu1527 -1.0 -2.3 nitrogen fixation protein FixS compare
Atu0463 -1.0 -5.7 hypothetical protein compare
Atu0461 -1.0 -7.2 hypothetical protein compare
Atu2484 -1.0 -1.7 hypothetical protein compare
Atu4890 -0.9 -2.3 IS426 transposase compare
Atu0469 -0.9 -5.5 hypothetical protein compare
Atu0452 -0.9 -6.8 hypothetical protein compare
Atu0453 -0.9 -7.3 hypothetical protein compare
Atu4108 -0.9 -6.5 ribonuclease D compare
Atu0458 -0.9 -2.8 hypothetical protein compare
Atu1535 -0.9 -2.2 cytochrome c oxidase, FixQ chain compare
Atu2237 -0.9 -2.1 cytochrome c1 compare
Atu0460 -0.9 -4.4 hypothetical protein compare
Atu0050 -0.9 -3.4 two component response regulator compare
Atu3578 -0.9 -2.6 glycerol-3-phosphate dehydrogenase compare
Atu3579 -0.9 -3.4 lactoylglutathione lyase compare
Atu0437 -0.9 -6.2 hypothetical protein compare
Atu0457 -0.9 -6.4 hypothetical protein compare
Atu0115 -0.9 -1.1 hypothetical protein compare
Atu1536 -0.9 -2.5 cytochrome C oxidase, FixO chain compare
Atu2796 -0.9 -2.9 precorrin-4 C11-methyltransferase compare
Atu8127 -0.8 -7.2 hypothetical protein compare
Atu1339 -0.8 -2.4 ribonuclease E compare
Atu0467 -0.8 -4.3 hypothetical protein compare
Atu1327 -0.8 -2.0 NADH-ubiquinone oxidoreductase compare
Atu0436 -0.8 -6.4 hypothetical protein compare
Atu4897 -0.8 -1.7 hypothetical protein compare
Atu8125 -0.8 -5.1 hypothetical protein compare
Atu2041 -0.8 -1.8 acetyltransferase compare
Atu2286 -0.8 -1.7 hypothetical protein compare
Atu0031 -0.8 -0.7 PTS system, IIA component compare
Atu1163 -0.8 -0.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0842 -0.8 -1.3 hypothetical protein compare
Atu1219 -0.8 -1.1 hypothetical protein compare
Atu0941 -0.8 -0.8 hypothetical protein compare
Atu2808 -0.8 -4.3 cobyric acid synthase compare
Atu2805 -0.8 -3.5 cobalamin synthesis protein compare
Atu0888 -0.8 -4.0 transcriptional regulator, MerR family compare
Atu0269 -0.8 -2.7 exodeoxyribonuclease VII large subunit compare
Atu0435 -0.8 -2.3 tRNA-Gly compare
Atu1468 -0.7 -3.1 hypothetical protein compare
Atu2163 -0.7 -0.8 hypothetical protein compare
Atu0468 -0.7 -4.2 hypothetical protein compare
Atu1364 -0.7 -2.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu6131 -0.7 -3.0 TraR Antiactivator compare
Atu0971 -0.7 -1.8 two component sensor kinase compare
Atu4161 -0.7 -1.3 hypothetical protein compare
Atu0422 -0.7 -1.1 ABC transporter, membrane spanning protein compare
Atu1534 -0.7 -1.8 cytochrome-c oxidase, FixP chain compare
Atu2067 -0.7 -0.8 hypothetical protein compare
Atu8126 -0.7 -4.1 putative phage tail protein I compare
Atu4894 -0.7 -4.1 transposase compare
Atu2207 -0.7 -2.4 two component sensor kinase compare
Atu8083 -0.7 -5.8 hypothetical protein compare
Atu4217 -0.7 -0.9 TetR family transcriptional regulator compare
Atu1810 -0.7 -0.8 hypothetical protein compare
Atu2335 -0.7 -1.7 hypothetical protein compare
Atu2802 -0.7 -4.4 precorrin-8X methylmutase compare
Atu3001 -0.7 -2.1 hypothetical protein compare
Atu1021 -0.7 -1.1 outer membrane protein compare
Atu3006 -0.7 -2.6 hypothetical protein compare
Atu2799 -0.7 -2.8 precorrin-6x reductase compare
Atu0925 -0.7 -2.1 hypothetical protein compare
Atu4893 -0.7 -2.9 hypothetical protein compare
Atu3008 -0.7 -0.8 hypothetical protein compare
Atu0499 -0.6 -3.9 hypothetical protein compare
Atu1439 -0.6 -1.7 hypothetical protein compare
Atu3017 -0.6 -1.0 phosphoglyceromutase compare
Atu4888 -0.6 -2.3 hypothetical protein compare
Atu0419 -0.6 -1.9 two component sensor kinase compare
Atu2204 -0.6 -1.6 hypothetical protein compare
Atu0141 -0.6 -1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu4887 -0.6 -3.0 hypothetical protein compare
Atu0462 -0.6 -4.0 endolysin compare
Atu0101 -0.6 -2.6 cytochrome c compare
Atu2810 -0.6 -4.4 cobalamin biosynthetic protein compare
Atu1846 -0.6 -1.0 hypothetical protein compare
Atu1223 -0.6 -1.0 hypothetical protein compare
Atu0470 -0.6 -1.9 hypothetical protein compare
Atu1131 -0.6 -3.6 outer membrane protein compare
Atu2793 -0.6 -2.4 cobyrinic acid a,c-diamide synthase compare
Atu1677 -0.6 -2.1 queuine tRNA-ribosyltransferase compare
Atu4099 -0.6 -2.7 hypothetical protein compare
Atu1779 -0.6 -1.4 hypothetical protein compare
Atu2217 -0.6 -2.5 hypothetical protein compare
Atu0368 -0.6 -2.3 tRNA pseudouridine synthase I compare
Atu1175 -0.5 -1.1 hypothetical protein compare
Atu0627 -0.5 -1.7 carboxymethylenebutenolidase compare
Atu4840 -0.5 -2.1 hypothetical protein compare
Atu1878 -0.5 -2.7 hypothetical protein compare
Atu1528 -0.5 -3.1 nitrogen fixation protein FixI compare
Atu0339 -0.5 -2.0 hypothetical protein compare
Atu1286 -0.5 -2.4 hypothetical protein compare
Atu2640 -0.5 -1.9 hypothetical protein compare
Atu0025 -0.5 -1.2 hypothetical protein compare
Atu5497 -0.5 -3.1 hypothetical protein compare
Atu0723 -0.5 -1.1 FAD dependent oxidoreductase compare
Atu4882 -0.5 -1.5 hypothetical protein compare
Atu2804 -0.5 -3.5 cobaltochelatase subunit compare
Atu4055 -0.5 -3.2 endo-1,3-1,4-beta-glycanase compare
Atu3413 -0.5 -1.8 AsnC family transcriptional regulator compare
Atu4299 -0.5 -1.8 hypothetical protein compare
Atu3021 -0.5 -3.0 sugar ABC transporter ATPase compare
Atu2115 -0.5 -2.9 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0947 -0.5 -1.7 transcriptional regulator, AsnC family compare
Atu1874 -0.5 -1.0 RecA protein compare
Atu8019 -0.5 -1.6 hypothetical protein compare
Atu1254 -0.5 -0.8 transcriptional regulator, ArsR family compare
Atu0375 -0.5 -1.3 small heat shock protein compare
Atu0846 -0.5 -1.6 transcriptional regulator, MarR family compare
Atu6114 -0.5 -1.6 hypothetical protein compare
Atu1333 -0.5 -1.5 outer membrane protein compare
Atu4892 -0.5 -3.8 hypothetical protein compare
Atu2058 -0.5 -1.8 hypothetical protein compare
Atu4889 -0.5 -2.8 hypothetical protein compare
Atu1529 -0.5 -1.2 nitrogen fixation protein FixH compare
Atu2131 -0.5 -2.7 hypothetical protein compare
Atu2083 -0.5 -1.4 DNA repair protein RecN compare
Atu1076 -0.5 -1.9 colicin V production protein compare
Atu2274 -0.5 -3.0 cation efflux system protein compare
Atu3780 -0.5 -1.8 hypothetical protein compare
Atu4502 -0.5 -2.2 cobalamin synthesis protein compare
Atu0972 -0.5 -2.1 lipA protein compare
Atu0399 -0.5 -1.7 dihydroorotase compare
Atu4610 -0.5 -3.3 sugar nucleotide epimerase/dehydratase compare
Atu0590 -0.5 -2.5 transcriptional regulator repressor compare
Atu0369 -0.5 -1.8 hypothetical protein compare
Atu8167 -0.5 -3.4 putative transmembrane protein compare
Atu0692 -0.5 -3.1 glutathione-regulated potassium-efflux system protein compare
Atu3779 -0.5 -3.2 lytic murein transglycosylase compare
Atu4605 -0.5 -1.7 IS3 family transposase compare
Atu3018 -0.5 -1.4 hypothetical protein compare
Atu2710 -0.5 -2.7 hypothetical protein compare
Atu1530 -0.5 -2.2 nitrogen fixation protein FixG compare
Atu1326 -0.5 -1.4 acetyltransferase compare
Atu0130 -0.5 -1.6 cytidine deaminase compare
Atu0193 -0.5 -1.9 glutamine synthetase compare
Atu0819 -0.4 -2.1 hypothetical protein compare
Atu2798 -0.4 -1.6 precorrin-6y methyltransferase compare
Atu2270 -0.4 -1.0 ATP-dependent Clp protease, proteolytic subunit compare
Atu3750 -0.4 -1.4 thiamine-phosphate pyrophosphorylase compare
Atu1058 -0.4 -1.7 hypothetical protein compare
Atu2056 -0.4 -2.2 hypothetical protein compare
Atu4468 -0.4 -2.1 iron transport ABC transporter permease compare
Atu1542 -0.4 -1.6 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3019 -0.4 -2.9 hypothetical protein compare
Atu0746 -0.4 -1.6 hypothetical protein compare
Atu3588 -0.4 -1.7 DNA-3-methyladenine glycosidase II compare
Atu2394 -0.4 -2.1 Regulator of Biofilm formation, Fnr Family compare
Atu2605 -0.4 -1.5 hypothetical protein compare
Atu3205 -0.4 -2.3 hypothetical protein compare
Atu4050 -0.4 -1.2 UTP-glucose-1-phosphate uridylyltransferase compare
Atu1588 -0.4 -2.7 homoserine dehydrogenase compare
Atu3313 -0.4 -1.5 hypothetical protein compare
Atu2001 -0.4 -2.9 excinuclease ABC subunit B compare
Atu0036 -0.4 -1.5 hypothetical protein compare
Atu2801 -0.4 -1.4 precorrin-2 C20 methyltransferase compare
Atu0893 -0.4 -1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu3011 -0.4 -1.0 ArsR family transcriptional regulator compare
Atu0421 -0.4 -0.5 ABC transporter, membrane spanning protein compare
Atu1077 -0.4 -1.1 DNA repair protein compare
Atu2278 -0.4 -2.2 transcriptional regulator, ArsR family compare
Atu3429 -0.4 -0.7 hypothetical protein compare
Atu0103 -0.4 -3.1 penicillin-binding protein compare
Atu2025 -0.4 -1.8 transcriptional regulator compare
Atu5502 -0.4 -1.9 hypothetical protein compare
Atu0936 -0.4 -1.5 methyltransferase compare
Atu2554 -0.4 -0.7 lysyl-tRNA synthetase compare
Atu4223 -0.4 -0.8 sarcosine oxidase delta subunit compare


Specific Phenotypes

For 1 genes in this experiment