Experiment set20S587 for Agrobacterium fabrum C58

Compare to:

Phage 97.1 + bacteria replicate 2

200 most important genes:

  gene name fitness t score description  
Atu3763 -3.1 -2.1 hypothetical protein compare
Atu2616 -2.6 -16.1 hypothetical protein compare
Atu2125 -2.4 -1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu1774 -2.4 -11.6 ABC transporter, substrate binding protein (peptide) compare
Atu0188 -2.4 -6.3 ABC transporter, membrane spanning protein (peptide) compare
Atu2615 -2.3 -13.2 hypothetical protein compare
Atu0190 -2.3 -10.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0434 -2.3 -2.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0189 -2.2 -5.6 ABC transporter, membrane spanning protein (peptide) compare
Atu4616 -1.9 -2.5 dTDP-4-dehydrorhamnose reductase compare
Atu1760 -1.8 -1.5 hypothetical protein compare
Atu0464 -1.6 -9.4 hypothetical protein compare
Atu0843 -1.6 -12.3 P type cation (metal) transporter, ATPase component compare
Atu4317 -1.5 -1.7 TetR family transcriptional regulator compare
Atu4896 -1.5 -2.9 acetyltransferase compare
Atu2270 -1.4 -1.9 ATP-dependent Clp protease, proteolytic subunit compare
Atu0086 -1.3 -1.1 ribosome-binding factor A compare
Atu0463 -1.3 -3.6 hypothetical protein compare
Atu4711 -1.3 -3.3 two component sensor kinase compare
Atu0467 -1.2 -5.4 hypothetical protein compare
Atu4166 -1.2 -1.5 UDP-glucose 4-epimerase compare
Atu0422 -1.2 -1.6 ABC transporter, membrane spanning protein compare
Atu0912 -1.2 -1.5 Na+/H+ antiporter compare
Atu2801 -1.2 -3.8 precorrin-2 C20 methyltransferase compare
Atu1030 -1.2 -1.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1327 -1.2 -1.5 NADH-ubiquinone oxidoreductase compare
Atu0201 -1.1 -2.3 hypothetical protein compare
Atu0453 -1.1 -7.2 hypothetical protein compare
Atu2722 -1.1 -5.5 porin compare
Atu0450 -1.1 -7.1 transcription antitermination protein compare
Atu0458 -1.1 -4.0 hypothetical protein compare
Atu1021 -1.1 -1.7 outer membrane protein compare
Atu4217 -1.1 -1.2 TetR family transcriptional regulator compare
Atu4614 -1.0 -6.0 glycosyltransferase compare
Atu1891 -1.0 -2.8 cobalamin biosynthesis protein compare
Atu4890 -1.0 -2.2 IS426 transposase compare
Atu3469 -1.0 -1.4 phosphoglyceromutase compare
Atu0461 -1.0 -8.2 hypothetical protein compare
Atu0468 -1.0 -7.0 hypothetical protein compare
Atu4615 -1.0 -4.9 glucose-1-phosphate thymidylyltransferase compare
Atu4618 -1.0 -5.8 dTDP-rhamnose-3,5-epimerase compare
Atu4613 -1.0 -7.1 glycosyltransferase compare
Atu1535 -1.0 -2.1 cytochrome c oxidase, FixQ chain compare
Atu2073 -1.0 -2.1 membrane protein compare
Atu2728 -1.0 -2.4 beta (1-->2) glucan export ATP-binding protein compare
Atu0460 -1.0 -4.0 hypothetical protein compare
Atu8087 -1.0 -1.0 putative peptidoglycan binding protein compare
Atu2484 -1.0 -1.0 hypothetical protein compare
Atu0471 -1.0 -2.6 hypothetical protein compare
Atu4617 -1.0 -4.6 dTDP-D-glucose-4,6-dehydratase compare
Atu2183 -1.0 -5.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu8158 -0.9 -1.3 hypothetical protein compare
Atu0454 -0.9 -5.5 hypothetical protein compare
Atu8083 -0.9 -7.4 hypothetical protein compare
Atu1468 -0.9 -3.5 hypothetical protein compare
Atu3730 -0.9 -1.1 hypothetical protein compare
Atu3578 -0.9 -2.5 glycerol-3-phosphate dehydrogenase compare
Atu4187 -0.9 -1.1 tRNA-Met compare
Atu0876 -0.9 -1.0 superoxide dismutase compare
Atu2800 -0.9 -2.4 precorrin-3B C17-methyltransferase compare
Atu4610 -0.9 -6.2 sugar nucleotide epimerase/dehydratase compare
Atu4609 -0.9 -6.7 glycosyltransferase compare
Atu0436 -0.9 -6.0 hypothetical protein compare
Atu2439 -0.9 -0.8 hypothetical protein compare
Atu2083 -0.9 -2.3 DNA repair protein RecN compare
Atu8127 -0.9 -7.3 hypothetical protein compare
Atu0457 -0.8 -5.9 hypothetical protein compare
Atu1364 -0.8 -2.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4108 -0.8 -5.2 ribonuclease D compare
Atu3353 -0.8 -5.0 mannose-1-phosphate guanylyltransferase compare
Atu0469 -0.8 -5.1 hypothetical protein compare
Atu2772 -0.8 -3.9 Invasion protein A compare
Atu2805 -0.8 -4.5 cobalamin synthesis protein compare
Atu0437 -0.8 -6.2 hypothetical protein compare
Atu0565 -0.8 -2.4 hypothetical protein compare
Atu0050 -0.8 -2.6 two component response regulator compare
Atu8128 -0.8 -4.3 putative bacteriophage P2 tail protein compare
Atu4608 -0.8 -6.0 hypothetical protein compare
Atu3413 -0.8 -2.1 AsnC family transcriptional regulator compare
Atu0036 -0.8 -2.4 hypothetical protein compare
Atu8126 -0.8 -3.8 putative phage tail protein I compare
Atu3887 -0.8 -2.8 small heat shock protein compare
Atu0470 -0.8 -2.2 hypothetical protein compare
Atu1163 -0.8 -0.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0452 -0.8 -5.6 hypothetical protein compare
Atu1175 -0.8 -1.4 hypothetical protein compare
Atu2239 -0.8 -1.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3740 -0.8 -3.7 fructose bisphosphate aldolase compare
Atu2217 -0.7 -1.9 hypothetical protein compare
Atu6165 -0.7 -1.1 hypothetical protein compare
Atu3598 -0.7 -0.6 thiol:disulfide interchange protein compare
Atu3468 -0.7 -0.7 hypothetical protein compare
Atu2802 -0.7 -3.9 precorrin-8X methylmutase compare
Atu2058 -0.7 -2.5 hypothetical protein compare
Atu0966 -0.7 -1.6 hypothetical protein compare
Atu2192 -0.7 -0.9 hypothetical protein compare
Atu1040 -0.7 -3.1 MFS permease compare
Atu1527 -0.7 -1.3 nitrogen fixation protein FixS compare
Atu2807 -0.7 -3.9 cob(I)alamin adenosyltransferase compare
Atu0566 -0.7 -1.4 hypothetical protein compare
Atu8125 -0.7 -4.1 hypothetical protein compare
Atu0230 -0.7 -1.4 hypothetical protein compare
Atu2077 -0.7 -1.5 DNA polymerase III, epsilon subunit compare
Atu1467 -0.7 -2.0 hypothetical protein compare
Atu8032 -0.7 -1.4 hypothetical protein compare
Atu2207 -0.7 -1.7 two component sensor kinase compare
Atu1291 -0.7 -1.0 hypothetical protein compare
Atu5451 -0.7 -0.8 hypothetical protein compare
Atu8167 -0.7 -4.3 putative transmembrane protein compare
Atu3759 -0.7 -1.1 hypothetical protein compare
Atu6189 -0.6 -0.7 protein secretion chaperone compare
Atu1534 -0.6 -1.5 cytochrome-c oxidase, FixP chain compare
Atu3579 -0.6 -2.2 lactoylglutathione lyase compare
Atu3517 -0.6 -2.7 acetyltransferase compare
Atu4894 -0.6 -4.1 transposase compare
Atu0340 -0.6 -0.9 SAM dependent methyltransferase compare
Atu0983 -0.6 -2.4 hypothetical protein compare
Atu3634 -0.6 -2.2 penicillin-binding protein dacf precursor compare
Atu8161 -0.6 -1.2 hypothetical protein compare
Atu8082 -0.6 -1.0 hypothetical protein compare
Atu1333 -0.6 -1.8 outer membrane protein compare
Atu3506 -0.6 -1.8 hypothetical protein compare
Atu2804 -0.6 -3.8 cobaltochelatase subunit compare
Atu1588 -0.6 -3.4 homoserine dehydrogenase compare
Atu3311 -0.6 -3.6 phosphomannose isomerase compare
Atu2798 -0.6 -2.1 precorrin-6y methyltransferase compare
Atu5164 -0.6 -0.6 type IV secretion protein AvhB3 compare
Atu1307 -0.6 -1.8 dihydroorotase compare
Atu1629 -0.6 -1.0 transcriptional regulator, ArsR family compare
Atu1739 -0.6 -1.2 permease compare
Atu1528 -0.6 -3.5 nitrogen fixation protein FixI compare
Atu1007 -0.6 -2.1 hypothetical protein compare
Atu1004 -0.6 -2.4 hypothetical protein compare
Atu2796 -0.6 -2.1 precorrin-4 C11-methyltransferase compare
Atu2237 -0.6 -1.3 cytochrome c1 compare
Atu0885 -0.6 -2.0 hypothetical protein compare
Atu2809 -0.6 -3.4 cobalamin biosynthesis protein compare
Atu1285 -0.6 -2.7 metal dependent hydrolase compare
Atu0368 -0.6 -2.2 tRNA pseudouridine synthase I compare
Atu4144 -0.6 -0.7 hypothetical protein compare
Atu1204 -0.6 -2.0 potassium uptake protein compare
Atu0846 -0.6 -2.2 transcriptional regulator, MarR family compare
Atu2648 -0.6 -2.0 hypothetical protein compare
Atu1529 -0.5 -1.4 nitrogen fixation protein FixH compare
Atu2808 -0.5 -2.3 cobyric acid synthase compare
Atu1131 -0.5 -2.9 outer membrane protein compare
Atu4893 -0.5 -3.1 hypothetical protein compare
Atu1127 -0.5 -1.0 molybdopterin converting factor small subunit compare
Atu3739 -0.5 -1.0 phosphoglycerate kinase compare
Atu0544 -0.5 -1.3 hypothetical protein compare
Atu8029 -0.5 -1.0 hypothetical protein compare
Atu1536 -0.5 -1.7 cytochrome C oxidase, FixO chain compare
Atu1470 -0.5 -1.0 Camphor resistance protein compare
Atu2692 -0.5 -2.1 intracellular septation protein compare
Atu0784 -0.5 -0.9 hypothetical protein compare
Atu0346 -0.5 -1.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0119 -0.5 -0.8 hypothetical protein compare
Atu2662 -0.5 -0.8 acetyltransferase compare
Atu4061 -0.5 -1.3 exopolysaccharide production repressor protein compare
Atu1260 -0.5 -0.8 hypothetical protein compare
Atu0895 -0.5 -1.5 ABC transporter, substrate binding protein compare
Atu8177 -0.5 -2.0 hypothetical protein compare
Atu2472 -0.5 -0.7 hypothetical protein compare
Atu0375 -0.5 -0.7 small heat shock protein compare
Atu4200 -0.5 -1.6 hypothetical protein compare
Atu1849 -0.5 -2.5 hypothetical protein compare
Atu4502 -0.5 -2.4 cobalamin synthesis protein compare
Atu2495 -0.5 -2.6 flavoprotein oxidoreductase compare
Atu1513 -0.5 -2.2 ABC excinuclease subunit A compare
Atu0462 -0.5 -2.8 endolysin compare
Atu3011 -0.5 -1.6 ArsR family transcriptional regulator compare
Atu0971 -0.5 -1.3 two component sensor kinase compare
Atu2304 -0.5 -3.3 bacteroid development protein compare
Atu3427 -0.5 -1.3 hypothetical protein compare
Atu2831 -0.5 -1.3 glucose inhibited division protein A compare
Atu5136 -0.5 -2.3 transcriptional repressor of the blcABC operon compare
Atu0331 -0.5 -0.6 sigma-54 modulation protein compare
Atu3707 -0.5 -1.5 phosphoserine aminotransferase compare
Atu5045 -0.5 -1.2 hypothetical protein compare
Atu2683 -0.5 -1.0 hypothetical protein compare
Atu2803 -0.5 -1.6 Cobalamin biosynthesis associated protein compare
Atu2164 -0.5 -2.9 hypothetical protein compare
Atu2799 -0.5 -1.9 precorrin-6x reductase compare
Atu6131 -0.5 -1.7 TraR Antiactivator compare
Atu2057 -0.5 -1.0 DNA helicase II compare
Atu4669 -0.5 -3.0 hypothetical protein compare
Atu0427 -0.5 -1.9 hypothetical protein compare
Atu0920 -0.5 -1.7 hypothetical protein compare
Atu0635 -0.5 -2.5 hypothetical protein compare
Atu2614 -0.5 -2.6 hypothetical protein compare
Atu1983 -0.5 -1.3 hypothetical protein compare
Atu0419 -0.5 -1.4 two component sensor kinase compare
Atu5088 -0.5 -1.1 hypothetical protein compare
Atu4882 -0.5 -1.0 hypothetical protein compare
Atu3008 -0.5 -0.5 hypothetical protein compare
Atu0556 -0.5 -2.2 hypothetical protein compare
Atu1177 -0.5 -2.0 hypothetical protein compare
Atu2001 -0.4 -3.0 excinuclease ABC subunit B compare
Atu0673 -0.4 -2.7 hypothetical protein compare
Atu0377 -0.4 -1.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in phage experiments