Experiment set20S581 for Agrobacterium fabrum C58

Compare to:

Phage 95.2 + bacteria replicate 2

200 most important genes:

  gene name fitness t score description  
Atu3730 -3.7 -2.5 hypothetical protein compare
Atu0188 -3.6 -8.3 ABC transporter, membrane spanning protein (peptide) compare
Atu6098 -3.0 -1.2 transcriptional regulator, HTH family compare
Atu1774 -2.8 -11.9 ABC transporter, substrate binding protein (peptide) compare
Atu2616 -2.7 -17.2 hypothetical protein compare
Atu0189 -2.7 -7.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0141 -2.5 -2.6 cytochrome O ubiquinol oxidase subunit I compare
Atu2615 -2.3 -14.8 hypothetical protein compare
Atu1030 -2.2 -2.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0190 -2.1 -7.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1163 -2.1 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4317 -2.0 -2.3 TetR family transcriptional regulator compare
Atu0434 -2.0 -2.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4618 -1.8 -10.4 dTDP-rhamnose-3,5-epimerase compare
Atu3001 -1.6 -3.9 hypothetical protein compare
Atu0843 -1.6 -12.0 P type cation (metal) transporter, ATPase component compare
Atu3353 -1.5 -10.8 mannose-1-phosphate guanylyltransferase compare
Atu4896 -1.5 -4.0 acetyltransferase compare
Atu2183 -1.5 -6.7 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0464 -1.5 -6.7 hypothetical protein compare
Atu4613 -1.5 -9.8 glycosyltransferase compare
Atu4617 -1.4 -6.8 dTDP-D-glucose-4,6-dehydratase compare
Atu4615 -1.4 -9.7 glucose-1-phosphate thymidylyltransferase compare
Atu4614 -1.4 -6.9 glycosyltransferase compare
Atu4616 -1.3 -2.0 dTDP-4-dehydrorhamnose reductase compare
Atu2439 -1.2 -1.2 hypothetical protein compare
Atu3311 -1.2 -8.6 phosphomannose isomerase compare
Atu1810 -1.2 -1.1 hypothetical protein compare
Atu0457 -1.1 -8.0 hypothetical protein compare
Atu4711 -1.1 -4.7 two component sensor kinase compare
Atu0463 -1.1 -5.8 hypothetical protein compare
Atu0450 -1.1 -6.5 transcription antitermination protein compare
Atu2640 -1.1 -3.6 hypothetical protein compare
Atu0467 -1.1 -3.9 hypothetical protein compare
Atu3017 -1.1 -1.4 phosphoglyceromutase compare
Atu0458 -1.0 -5.5 hypothetical protein compare
Atu4890 -1.0 -2.3 IS426 transposase compare
Atu0436 -1.0 -6.9 hypothetical protein compare
Atu0471 -1.0 -4.1 hypothetical protein compare
Atu4897 -1.0 -2.2 hypothetical protein compare
Atu4166 -1.0 -2.5 UDP-glucose 4-epimerase compare
Atu3012 -1.0 -1.9 hypothetical protein compare
Atu2057 -1.0 -2.0 DNA helicase II compare
Atu3763 -1.0 -1.3 hypothetical protein compare
Atu2807 -1.0 -5.2 cob(I)alamin adenosyltransferase compare
Atu2722 -1.0 -6.9 porin compare
Atu4609 -1.0 -7.0 glycosyltransferase compare
Atu8127 -1.0 -8.0 hypothetical protein compare
Atu4108 -1.0 -5.8 ribonuclease D compare
Atu0086 -1.0 -0.7 ribosome-binding factor A compare
Atu8128 -1.0 -4.9 putative bacteriophage P2 tail protein compare
Atu0461 -0.9 -6.7 hypothetical protein compare
Atu8126 -0.9 -4.9 putative phage tail protein I compare
Atu0437 -0.9 -7.1 hypothetical protein compare
Atu8083 -0.9 -6.8 hypothetical protein compare
Atu0454 -0.9 -5.1 hypothetical protein compare
Atu1739 -0.9 -2.0 permease compare
Atu3740 -0.9 -4.4 fructose bisphosphate aldolase compare
Atu2793 -0.9 -3.2 cobyrinic acid a,c-diamide synthase compare
Atu0453 -0.9 -7.0 hypothetical protein compare
Atu0468 -0.9 -5.4 hypothetical protein compare
Atu2585 -0.9 -4.9 hypothetical protein compare
Atu4608 -0.9 -6.8 hypothetical protein compare
Atu8125 -0.9 -6.1 hypothetical protein compare
Atu0469 -0.8 -5.6 hypothetical protein compare
Atu3598 -0.8 -0.7 thiol:disulfide interchange protein compare
Atu0460 -0.8 -4.1 hypothetical protein compare
Atu0470 -0.8 -2.4 hypothetical protein compare
Atu4161 -0.8 -1.2 hypothetical protein compare
Atu0452 -0.8 -5.8 hypothetical protein compare
Atu3011 -0.8 -2.8 ArsR family transcriptional regulator compare
Atu0888 -0.8 -4.4 transcriptional regulator, MerR family compare
Atu4072 -0.8 -1.1 nodulation protein N compare
Atu1629 -0.8 -1.3 transcriptional regulator, ArsR family compare
Atu8194 -0.8 -1.8 hypothetical protein compare
Atu0050 -0.8 -3.1 two component response regulator compare
Atu0939 -0.8 -2.3 PemI protein compare
Atu3429 -0.8 -1.1 hypothetical protein compare
Atu1515 -0.7 -2.7 hypothetical protein compare
Atu4882 -0.7 -1.6 hypothetical protein compare
Atu2808 -0.7 -3.2 cobyric acid synthase compare
Atu0399 -0.7 -2.5 dihydroorotase compare
Atu2805 -0.7 -3.2 cobalamin synthesis protein compare
Atu1468 -0.7 -2.7 hypothetical protein compare
Atu4610 -0.7 -4.6 sugar nucleotide epimerase/dehydratase compare
Atu2582 -0.7 -4.7 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1513 -0.7 -2.8 ABC excinuclease subunit A compare
Atu0977 -0.7 -1.7 serine protease DO-like protease compare
Atu3579 -0.7 -2.9 lactoylglutathione lyase compare
Atu8087 -0.7 -1.0 putative peptidoglycan binding protein compare
Atu0130 -0.7 -2.8 cytidine deaminase compare
Atu8053 -0.7 -2.4 hypothetical protein compare
Atu1467 -0.7 -3.1 hypothetical protein compare
Atu3006 -0.7 -3.1 hypothetical protein compare
Atu4887 -0.7 -2.2 hypothetical protein compare
Atu0972 -0.7 -3.5 lipA protein compare
Atu1536 -0.7 -1.8 cytochrome C oxidase, FixO chain compare
Atu0025 -0.7 -1.0 hypothetical protein compare
Atu0815 -0.7 -2.6 hypothetical protein compare
Atu1364 -0.7 -2.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3739 -0.6 -1.4 phosphoglycerate kinase compare
Atu1031 -0.6 -2.0 hypothetical protein compare
Atu4148 -0.6 -2.6 UDP-glucuronic acid epimerase compare
Atu4099 -0.6 -2.5 hypothetical protein compare
Atu1529 -0.6 -2.0 nitrogen fixation protein FixH compare
Atu5513 -0.6 -1.6 cold shock protein compare
Atu2796 -0.6 -3.0 precorrin-4 C11-methyltransferase compare
Atu2801 -0.6 -2.1 precorrin-2 C20 methyltransferase compare
Atu1470 -0.6 -1.1 Camphor resistance protein compare
Atu4669 -0.6 -3.5 hypothetical protein compare
Atu8195 -0.6 -1.5 hypothetical protein compare
Atu2804 -0.6 -3.8 cobaltochelatase subunit compare
Atu2590 -0.6 -4.0 hypothetical protein compare
Atu2798 -0.6 -2.2 precorrin-6y methyltransferase compare
Atu1845 -0.6 -2.1 phosphoribosylformylglycinamidine synthase I compare
Atu2809 -0.6 -3.9 cobalamin biosynthesis protein compare
Atu3160 -0.6 -2.1 hypothetical protein compare
Atu4888 -0.6 -2.5 hypothetical protein compare
Atu3466 -0.6 -1.1 ArsR family transcriptional regulator compare
Atu2041 -0.6 -1.4 acetyltransferase compare
Atu4873 -0.6 -2.9 TetR family transcriptional regulator compare
Atu4894 -0.6 -3.3 transposase compare
Atu2592 -0.6 -2.9 hypothetical protein compare
Atu8167 -0.6 -3.5 putative transmembrane protein compare
Atu2584 -0.6 -2.0 hypothetical protein compare
Atu2555 -0.6 -1.7 L-lysine 2,3-aminomutase compare
Atu3461 -0.6 -1.3 GntR family transcriptional regulator compare
Atu1679 -0.6 -1.6 peptidyl prolyl cis-trans isomerase compare
Atu0499 -0.6 -3.0 hypothetical protein compare
Atu1542 -0.6 -2.5 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0773 -0.5 -3.1 surfeit 1 compare
Atu0462 -0.5 -3.8 endolysin compare
Atu6131 -0.5 -2.6 TraR Antiactivator compare
Atu1527 -0.5 -1.5 nitrogen fixation protein FixS compare
Atu4893 -0.5 -2.4 hypothetical protein compare
Atu0117 -0.5 -2.6 hypothetical protein compare
Atu1078 -0.5 -1.2 hypothetical protein compare
Atu4505 -0.5 -3.3 LacI family transcriptional regulator compare
Atu2577 -0.5 -4.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu1131 -0.5 -3.1 outer membrane protein compare
Atu2083 -0.5 -2.0 DNA repair protein RecN compare
Atu0777 -0.5 -0.5 hypothetical protein compare
Atu3291 -0.5 -2.2 Lpr family transcriptional regulator compare
Atu1701 -0.5 -0.8 protein-L-isoaspartate O-methyltransferase compare
Atu0142 -0.5 -1.0 cytochrome o ubiquinol oxidase subunit II compare
Atu4053 -0.5 -0.8 succinoglycan biosynthesis protein compare
Atu0368 -0.5 -1.9 tRNA pseudouridine synthase I compare
Atu0923 -0.5 -2.0 hypothetical protein compare
Atu2286 -0.5 -1.1 hypothetical protein compare
Atu2583 -0.5 -4.1 glycosyltransferase compare
Atu2335 -0.5 -1.2 hypothetical protein compare
Atu2810 -0.5 -3.4 cobalamin biosynthetic protein compare
Atu5125 -0.5 -2.1 GntR family transcriptional regulator compare
Atu3467 -0.5 -1.7 hypothetical protein compare
Atu0435 -0.5 -1.6 tRNA-Gly compare
Atu2710 -0.5 -3.2 hypothetical protein compare
Atu1891 -0.5 -1.5 cobalamin biosynthesis protein compare
Atu8082 -0.5 -1.1 hypothetical protein compare
Atu4892 -0.5 -3.8 hypothetical protein compare
Atu5173 -0.5 -1.3 dehydrogenase compare
Atu1040 -0.5 -2.4 MFS permease compare
Atu4671 -0.5 -1.7 response regulator compare
Atu0845 -0.5 -2.5 hypothetical protein compare
Atu6189 -0.5 -0.7 protein secretion chaperone compare
Atu3780 -0.5 -2.4 hypothetical protein compare
Atu4884 -0.5 -1.9 hypothetical protein compare
Atu3443 -0.5 -1.7 hypothetical protein compare
Atu0723 -0.5 -0.8 FAD dependent oxidoreductase compare
Atu2591 -0.5 -2.7 glucosyltransferase compare
Atu2163 -0.5 -0.7 hypothetical protein compare
Atu3628 -0.5 -1.8 hypothetical protein compare
Atu2207 -0.5 -1.3 two component sensor kinase compare
Atu5485 -0.5 -1.2 hypothetical protein compare
Atu4391 -0.5 -1.4 nitric oxide reductase NorE protein compare
Atu2116 -0.5 -1.7 hypothetical protein compare
Atu3150 -0.5 -2.2 sugar ABC transporter permease compare
Atu4237 -0.5 -2.1 hypothetical protein compare
Atu3605 -0.5 -2.5 hypothetical protein compare
Atu3578 -0.5 -1.7 glycerol-3-phosphate dehydrogenase compare
Atu3020 -0.5 -2.5 GntR family transcriptional regulator compare
Atu0105 -0.5 -1.6 hypothetical protein compare
Atu2379 -0.5 -3.3 phosphomannomutase compare
Atu8185 -0.5 -1.3 hypothetical protein compare
Atu2040 -0.5 -2.1 phosphoserine phosphatase compare
Atu5057 -0.5 -1.1 hypothetical protein compare
Atu8093 -0.5 -2.1 hypothetical protein compare
Atu1225 -0.5 -0.9 hypothetical protein compare
Atu4879 -0.5 -2.4 hypothetical protein compare
Atu2204 -0.5 -0.9 hypothetical protein compare
Atu1838 -0.5 -1.9 ABC transporter, substrate binding protein (amino acid) compare
Atu2077 -0.5 -1.6 DNA polymerase III, epsilon subunit compare
Atu0947 -0.5 -1.6 transcriptional regulator, AsnC family compare
Atu0538 -0.5 -1.7 hypothetical protein compare
Atu3779 -0.5 -2.7 lytic murein transglycosylase compare
Atu2799 -0.5 -2.0 precorrin-6x reductase compare
Atu6153 -0.4 -1.4 conserved hypothetical protein compare
Atu2115 -0.4 -2.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu3506 -0.4 -1.7 hypothetical protein compare
Atu4530 -0.4 -2.0 TetR family transcriptional regulator compare
Atu2237 -0.4 -0.9 cytochrome c1 compare


Specific Phenotypes

For 1 genes in this experiment