Experiment set20S577 for Agrobacterium fabrum C58

Compare to:

Phage 95.1 + bacteria replicate 1

200 most important genes:

  gene name fitness t score description  
Atu0434 -2.8 -2.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2616 -2.6 -16.2 hypothetical protein compare
Atu1774 -2.5 -10.6 ABC transporter, substrate binding protein (peptide) compare
Atu0190 -2.5 -11.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0188 -2.3 -5.9 ABC transporter, membrane spanning protein (peptide) compare
Atu2615 -2.3 -16.7 hypothetical protein compare
Atu0189 -2.3 -5.1 ABC transporter, membrane spanning protein (peptide) compare
Atu3730 -2.1 -1.8 hypothetical protein compare
Atu3009 -2.0 -2.1 exopolysaccharide production protein compare
Atu0464 -1.8 -10.3 hypothetical protein compare
Atu3598 -1.8 -1.2 thiol:disulfide interchange protein compare
Atu0843 -1.7 -12.9 P type cation (metal) transporter, ATPase component compare
Atu6098 -1.6 -0.9 transcriptional regulator, HTH family compare
Atu4896 -1.6 -3.2 acetyltransferase compare
Atu2017 -1.4 -1.7 hypothetical protein compare
Atu0463 -1.4 -4.4 hypothetical protein compare
Atu1527 -1.3 -3.0 nitrogen fixation protein FixS compare
Atu0086 -1.3 -0.7 ribosome-binding factor A compare
Atu1470 -1.3 -1.3 Camphor resistance protein compare
Atu1810 -1.2 -1.2 hypothetical protein compare
Atu1062 -1.2 -1.9 phosphatidylserine synthase compare
Atu0769 -1.2 -1.5 protoheme IX farnesyltransferase compare
Atu0453 -1.1 -6.4 hypothetical protein compare
Atu4148 -1.1 -4.9 UDP-glucuronic acid epimerase compare
Atu0450 -1.1 -7.5 transcription antitermination protein compare
Atu2584 -1.1 -5.7 hypothetical protein compare
Atu3006 -1.1 -4.3 hypothetical protein compare
Atu0457 -1.1 -7.4 hypothetical protein compare
Atu0454 -1.1 -5.9 hypothetical protein compare
Atu1359 -1.0 -1.1 dnaK deletion suppressor protein compare
Atu0050 -1.0 -3.1 two component response regulator compare
Atu0436 -1.0 -7.8 hypothetical protein compare
Atu0723 -1.0 -1.8 FAD dependent oxidoreductase compare
Atu2067 -1.0 -1.0 hypothetical protein compare
Atu2554 -1.0 -1.4 lysyl-tRNA synthetase compare
Atu4882 -1.0 -1.4 hypothetical protein compare
Atu0413 -1.0 -2.3 stress induced protein compare
Atu0460 -1.0 -6.3 hypothetical protein compare
Atu8126 -1.0 -4.2 putative phage tail protein I compare
Atu1891 -1.0 -2.3 cobalamin biosynthesis protein compare
Atu0298 -1.0 -3.2 orotidine 5 compare
Atu0458 -1.0 -6.8 hypothetical protein compare
Atu1030 -0.9 -1.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4217 -0.9 -1.1 TetR family transcriptional regulator compare
Atu3012 -0.9 -1.5 hypothetical protein compare
Atu8127 -0.9 -8.0 hypothetical protein compare
Atu8125 -0.9 -5.3 hypothetical protein compare
Atu0467 -0.9 -3.2 hypothetical protein compare
Atu0400 -0.9 -1.4 orotate phosphoribosyltransferase compare
Atu8128 -0.9 -5.5 putative bacteriophage P2 tail protein compare
Atu2592 -0.9 -4.9 hypothetical protein compare
Atu0452 -0.9 -5.8 hypothetical protein compare
Atu0031 -0.9 -0.7 PTS system, IIA component compare
Atu2722 -0.9 -5.1 porin compare
Atu2585 -0.9 -4.6 hypothetical protein compare
Atu4618 -0.9 -5.7 dTDP-rhamnose-3,5-epimerase compare
Atu0461 -0.9 -6.0 hypothetical protein compare
Atu3011 -0.8 -2.7 ArsR family transcriptional regulator compare
Atu0468 -0.8 -5.0 hypothetical protein compare
Atu4108 -0.8 -5.5 ribonuclease D compare
Atu8083 -0.8 -6.9 hypothetical protein compare
Atu3578 -0.8 -2.6 glycerol-3-phosphate dehydrogenase compare
Atu0486 -0.8 -2.3 dihydroorotate dehydrogenase compare
Atu0893 -0.8 -3.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0437 -0.8 -5.7 hypothetical protein compare
Atu8041 -0.8 -3.2 hypothetical protein compare
Atu3740 -0.8 -4.1 fructose bisphosphate aldolase compare
Atu4894 -0.8 -4.7 transposase compare
Atu4889 -0.8 -4.1 hypothetical protein compare
Atu8161 -0.8 -1.5 hypothetical protein compare
Atu0499 -0.8 -4.7 hypothetical protein compare
Atu2590 -0.8 -5.7 hypothetical protein compare
Atu4893 -0.8 -2.9 hypothetical protein compare
Atu2582 -0.8 -3.4 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2799 -0.7 -2.9 precorrin-6x reductase compare
Atu2577 -0.7 -6.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu1446 -0.7 -0.5 two component response regulator compare
Atu1535 -0.7 -1.7 cytochrome c oxidase, FixQ chain compare
Atu1619 -0.7 -1.6 protein-export membrane protein SECG compare
Atu2073 -0.7 -1.8 membrane protein compare
Atu4711 -0.7 -3.1 two component sensor kinase compare
Atu1327 -0.7 -2.0 NADH-ubiquinone oxidoreductase compare
Atu1358 -0.7 -2.1 hypothetical protein compare
Atu1189 -0.7 -1.5 hypothetical protein compare
Atu2807 -0.7 -3.0 cob(I)alamin adenosyltransferase compare
Atu0331 -0.7 -1.1 sigma-54 modulation protein compare
Atu0201 -0.7 -1.7 hypothetical protein compare
Atu2335 -0.7 -2.0 hypothetical protein compare
Atu0135 -0.7 -1.4 uracil phosphoribosyltransferase compare
Atu4897 -0.7 -1.3 hypothetical protein compare
Atu0904 -0.7 -2.0 hypothetical protein compare
Atu4879 -0.7 -3.5 hypothetical protein compare
Atu0812 -0.7 -2.2 hypothetical protein compare
Atu6131 -0.7 -2.6 TraR Antiactivator compare
Atu0469 -0.7 -3.8 hypothetical protein compare
Atu0419 -0.7 -2.1 two component sensor kinase compare
Atu2183 -0.7 -3.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4892 -0.7 -4.9 hypothetical protein compare
Atu4072 -0.7 -1.0 nodulation protein N compare
Atu8202 -0.7 -2.7 hypothetical protein compare
Atu0687 -0.7 -1.6 hypothetical protein compare
Atu3754 -0.7 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0025 -0.7 -2.0 hypothetical protein compare
Atu3780 -0.6 -2.9 hypothetical protein compare
Atu4890 -0.6 -1.5 IS426 transposase compare
Atu1031 -0.6 -2.3 hypothetical protein compare
Atu1699 -0.6 -1.9 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu0470 -0.6 -1.9 hypothetical protein compare
Atu4149 -0.6 -4.2 UDP-glucose 6-dehydrogenase compare
Atu3001 -0.6 -1.9 hypothetical protein compare
Atu2432 -0.6 -1.7 hypothetical protein compare
Atu6189 -0.6 -1.1 protein secretion chaperone compare
Atu2583 -0.6 -4.5 glycosyltransferase compare
Atu1131 -0.6 -3.6 outer membrane protein compare
Atu2056 -0.6 -2.4 hypothetical protein compare
Atu3169 -0.6 -2.1 sorbitol/mannitol ABC transporter permease compare
Atu1163 -0.6 -0.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0762 -0.6 -1.8 hypothetical protein compare
Atu4617 -0.6 -4.2 dTDP-D-glucose-4,6-dehydratase compare
Atu2441 -0.6 -1.6 RNA methylase compare
Atu2217 -0.6 -2.7 hypothetical protein compare
Atu2235 -0.6 -1.8 hypothetical protein compare
Atu1816 -0.6 -3.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu4876 -0.6 -4.3 oxidoreductase compare
Atu1739 -0.6 -1.5 permease compare
Atu5164 -0.6 -0.6 type IV secretion protein AvhB3 compare
Atu4616 -0.6 -1.1 dTDP-4-dehydrorhamnose reductase compare
Atu1677 -0.6 -1.9 queuine tRNA-ribosyltransferase compare
Atu0471 -0.6 -2.7 hypothetical protein compare
Atu3010 -0.6 -3.3 hypothetical protein compare
Atu4215 -0.6 -2.2 cell division protein compare
Atu4763 -0.6 -2.2 AsnC family transcriptional regulator compare
Atu2472 -0.6 -1.2 hypothetical protein compare
Atu4614 -0.6 -3.2 glycosyltransferase compare
Atu5032 -0.6 -4.2 hypothetical protein compare
Atu0925 -0.6 -2.6 hypothetical protein compare
Atu3014 -0.6 -1.3 hypothetical protein compare
Atu3750 -0.6 -1.5 thiamine-phosphate pyrophosphorylase compare
Atu5444 -0.6 -2.3 short-chain dehydrogenase compare
Atu2187 -0.6 -1.7 transcriptional regulator, ArsR family compare
Atu0462 -0.5 -3.4 endolysin compare
Atu8082 -0.5 -0.8 hypothetical protein compare
Atu3609 -0.5 -2.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu1542 -0.5 -2.7 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2796 -0.5 -3.2 precorrin-4 C11-methyltransferase compare
Atu2591 -0.5 -2.7 glucosyltransferase compare
Atu0842 -0.5 -1.2 hypothetical protein compare
Atu2804 -0.5 -3.4 cobaltochelatase subunit compare
Atu5486 -0.5 -2.3 hypothetical protein compare
Atu5106 -0.5 -2.0 DNA binding protein compare
Atu0368 -0.5 -2.2 tRNA pseudouridine synthase I compare
Atu0422 -0.5 -1.0 ABC transporter, membrane spanning protein compare
Atu2207 -0.5 -1.8 two component sensor kinase compare
Atu3537 -0.5 -1.9 hypothetical protein compare
Atu0926 -0.5 -2.9 hypothetical protein compare
Atu2802 -0.5 -3.2 precorrin-8X methylmutase compare
Atu0846 -0.5 -2.4 transcriptional regulator, MarR family compare
Atu1039 -0.5 -2.0 DNA repair protein RecO compare
Atu2683 -0.5 -1.1 hypothetical protein compare
Atu1264 -0.5 -2.7 hypothetical protein compare
Atu2710 -0.5 -3.7 hypothetical protein compare
Atu4159 -0.5 -1.5 AsnC family transcriptional regulator compare
Atu4888 -0.5 -2.1 hypothetical protein compare
Atu4505 -0.5 -3.3 LacI family transcriptional regulator compare
Atu0435 -0.5 -1.4 tRNA-Gly compare
Atu2810 -0.5 -3.4 cobalamin biosynthetic protein compare
Atu2169 -0.5 -2.2 hypothetical protein compare
Atu2077 -0.5 -0.9 DNA polymerase III, epsilon subunit compare
Atu2808 -0.5 -3.0 cobyric acid synthase compare
Atu0101 -0.5 -1.6 cytochrome c compare
Atu1057 -0.5 -1.9 ADP-Ribose Pyrophosphatase compare
Atu4878 -0.5 -2.3 hypothetical protein compare
Atu0749 -0.5 -1.7 biotin synthesis BioY protein compare
Atu4887 -0.5 -1.9 hypothetical protein compare
Atu4873 -0.5 -1.8 TetR family transcriptional regulator compare
Atu3353 -0.5 -2.9 mannose-1-phosphate guanylyltransferase compare
Atu3019 -0.5 -2.7 hypothetical protein compare
Atu2406 -0.5 -1.6 hypothetical protein compare
Atu2040 -0.5 -1.7 phosphoserine phosphatase compare
Atu0430 -0.5 -3.1 chaperonin (heat shock protein hsp33) compare
Atu0105 -0.5 -1.7 hypothetical protein compare
Atu3248 -0.5 -2.2 cell division inhibitor compare
Atu1285 -0.5 -2.3 metal dependent hydrolase compare
Atu4865 -0.5 -2.9 oxidoreductase compare
Atu3497 -0.5 -1.2 hypothetical protein compare
Atu8054 -0.5 -0.5 hypothetical protein compare
Atu5159 -0.5 -2.2 hypothetical protein compare
Atu3886 -0.5 -2.8 lysophospholipase compare
Atu4840 -0.5 -2.3 hypothetical protein compare
Atu0977 -0.5 -1.4 serine protease DO-like protease compare
Atu1439 -0.5 -1.4 hypothetical protein compare
Atu3572 -0.5 -3.0 transcriptional regulator compare
Atu0972 -0.5 -1.9 lipA protein compare
Atu1705 -0.5 -1.3 SEC-independent protein translocase protein compare
Atu0888 -0.5 -2.4 transcriptional regulator, MerR family compare
Atu0788 -0.5 -2.3 hypothetical protein compare
Atu2798 -0.5 -1.7 precorrin-6y methyltransferase compare
Atu4093 -0.5 -1.5 hypothetical protein compare
Atu3023 -0.5 -2.9 sugar ABC transporter permease compare
Atu4055 -0.5 -2.7 endo-1,3-1,4-beta-glycanase compare


Specific Phenotypes

For 2 genes in this experiment