Experiment set20IT079 for Pseudomonas simiae WCS417

200 most important genes:

gene	name	fitness	t score	description
PS417_27795		-4.2	-1.0	orotate phosphoribosyltransferase
PS417_27135		-4.1	-1.0	glutamine synthetase
PS417_11705		-4.1	-8.5	cyclic peptide transporter
PS417_23545		-4.0	-2.3	gamma-glutamyl kinase
PS417_22450		-3.8	-1.5	ATP-dependent DNA helicase RuvA
PS417_21480		-2.9	-1.4	23S rRNA pseudouridylate synthase
PS417_24745		-2.8	-2.5	gamma-glutamyl phosphate reductase
PS417_27195		-2.5	-1.1	N-acetylglutamate synthase
PS417_13255		-2.3	-1.5	ABC transporter
PS417_08125		-2.3	-0.5	prephenate dehydratase
PS417_06680		-2.3	-8.4	nuclease PIN
PS417_23770		-2.3	-1.1	exodeoxyribonuclease V subunit alpha
PS417_21125		-2.2	-5.2	phosphoadenosine phosphosulfate reductase
PS417_26990		-2.2	-0.7	RNA pyrophosphohydrolase
PS417_02280		-2.2	-1.3	GlcNAc-PI de-N-acetylase
PS417_26730		-2.2	-0.7	pyrroline-5-carboxylate reductase
PS417_26850		-2.1	-0.8	twin-arginine translocation pathway signal protein
PS417_03875		-2.1	-2.2	membrane protein
PS417_08170		-2.0	-7.7	capsular biosynthesis protein
PS417_22565		-2.0	-0.8	formyltetrahydrofolate deformylase
PS417_16555		-2.0	-1.4	cupin
PS417_01605		-1.9	-0.9	phosphoglycerate mutase
PS417_07560		-1.9	-1.5	universal stress protein UspA
PS417_17070		-1.9	-1.8	RNA polymerase subunit sigma-24
PS417_09680		-1.9	-1.5	hydrolase
PS417_25710		-1.8	-1.2	indole-3-glycerol-phosphate synthase
PS417_27870		-1.8	-2.9	ATP-dependent DNA helicase RecG
PS417_22570		-1.8	-0.7	H-NS histone
PS417_03525		-1.8	-1.4	hypothetical protein
PS417_22115		-1.7	-3.1	transcriptional regulator
PS417_21015		-1.7	-1.9	EstX protein
PS417_01580		-1.6	-1.3	imidazole glycerol phosphate synthase
PS417_17215		-1.6	-2.0	peptidylprolyl isomerase
PS417_13510		-1.5	-0.9	polyketide cyclase
PS417_08365		-1.5	-0.8	hypothetical protein
PS417_15030		-1.5	-1.0	short-chain dehydrogenase
PS417_20635		-1.4	-0.9	ABC transporter ATP-binding protein
PS417_28220		-1.4	-1.1	LysR family transcriptional regulator
PS417_23705		-1.4	-2.8	Tryptophan 2,3-dioxygenase (EC 1.13.11.11) (from data)
PS417_23135		-1.4	-1.3	GTP-binding protein
PS417_00455		-1.4	-1.3	hypothetical protein
PS417_27425		-1.4	-5.7	exopolyphosphatase
PS417_02880		-1.3	-0.9	copper chaperone
PS417_22690		-1.3	-2.6	phosphogluconate dehydratase
PS417_28185		-1.3	-2.1	homocysteine methyltransferase
PS417_10655		-1.3	-2.5	LuxR family transcriptional regulator
PS417_08410		-1.3	-1.8	hypothetical protein
PS417_06945		-1.3	-1.0	membrane protein
PS417_06635		-1.3	-1.0	ferredoxin
PS417_18600		-1.3	-1.8	isopropylmalate isomerase
PS417_08540		-1.3	-1.4	RNA helicase
PS417_07170		-1.3	-2.8	hypothetical protein
PS417_19350		-1.3	-3.2	GTP cyclohydrolase
PS417_24765		-1.3	-2.8	membrane protein
PS417_13290		-1.2	-2.6	AraC family transcriptional regulator
PS417_01920		-1.2	-0.7	ATP-dependent protease subunit HslV
PS417_08230		-1.2	-1.2	lipopolysaccharide biosynthesis protein RfbH
PS417_20160		-1.2	-1.5	cysteine synthase
PS417_09865		-1.2	-1.2	hypothetical protein
PS417_02870		-1.2	-5.1	TonB-dependent receptor
PS417_16750		-1.2	-1.5	ABC transporter ATP-binding protein
PS417_07870		-1.2	-1.3	hypothetical protein
PS417_20055		-1.2	-2.1	cob(II)yrinic acid a,c-diamide reductase
PS417_08335		-1.2	-1.0	hypothetical protein
PS417_23670		-1.2	-3.5	Muconate cycloisomerase (EC 5.5.1.1) (from data)
PS417_08740		-1.2	-1.7	ribose-phosphate pyrophosphokinase
PS417_13275		-1.2	-4.4	membrane protein
PS417_24500		-1.2	-1.5	DEAD/DEAH box helicase
PS417_27585		-1.2	-1.2	diaminopimelate epimerase
PS417_00345		-1.2	-1.3	copper-binding protein
PS417_27940		-1.2	-1.3	type VI secretion protein
PS417_26530		-1.2	-0.9	hypothetical protein
PS417_21535		-1.2	-3.4	chemotaxis protein CheY
PS417_22060		-1.2	-0.8	hypothetical protein
PS417_07710		-1.1	-2.7	membrane protein
PS417_07985		-1.1	-1.1	AbrB family transcriptional regulator
PS417_04010		-1.1	-3.6	glycine/betaine ABC transporter ATP-binding protein
PS417_05815		-1.1	-2.7	recombinase RecA
PS417_16520		-1.1	-1.4	cold-shock protein
PS417_12775		-1.1	-3.6	GntR family transcriptional regulator
PS417_26305		-1.1	-2.7	AraC family transcriptional regulator
PS417_13445		-1.1	-1.2	D-aminopeptidase
PS417_00085		-1.1	-1.5	16S rRNA methyltransferase
PS417_06465		-1.1	-2.2	transcriptional regulator
PS417_03560		-1.1	-0.9	GTP-binding protein
PS417_16510		-1.1	-2.9	Clp protease ClpX
PS417_26345		-1.1	-5.3	choline dehydrogenase
PS417_19285		-1.1	-1.1	ankyrin
PS417_10060		-1.1	-1.4	hypothetical protein
PS417_15325		-1.1	-0.8	type VI secretion protein
PS417_10985		-1.1	-0.7	NADH:flavin oxidoreductase
PS417_07640		-1.1	-2.1	glyceraldehyde-3-phosphate dehydrogenase
PS417_14260		-1.1	-1.8	phosphate ABC transporter permease
PS417_00160		-1.1	-1.6	2-dehydro-3-deoxy-6-phosphogalactonate aldolase
PS417_17105		-1.0	-1.5	spore coat protein
PS417_15915		-1.0	-1.0	hypothetical protein
PS417_26145		-1.0	-1.5	hypothetical protein
PS417_00545		-1.0	-2.0	hypothetical protein
PS417_06735		-1.0	-1.6	3-oxoadipate enol-lactonase
PS417_14395		-1.0	-1.7	fe2+ zn2+ uptake regulation protein
PS417_08220		-1.0	-0.6	epimerase
PS417_24895		-1.0	-0.8	hypothetical protein
PS417_01270		-1.0	-1.1	iron ABC transporter substrate-binding protein
PS417_25645		-1.0	-3.6	peptidase M23
PS417_04025		-1.0	-2.2	glycine/betaine ABC transporter permease
PS417_24620		-1.0	-1.5	hypothetical protein
PS417_03935		-1.0	-2.0	N-acetyl-anhydromuranmyl-L-alanine amidase
PS417_05535		-1.0	-0.8	Fis family transcriptional regulator
PS417_13270		-1.0	-3.3	lipoprotein
PS417_23715		-1.0	-1.7	cupin
PS417_12935		-1.0	-1.7	RNA polymerase sigma factor
PS417_17550		-1.0	-2.0	branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data)
PS417_26765		-1.0	-2.1	membrane protein
PS417_17035		-1.0	-0.8	Cro/Cl family transcriptional regulator
PS417_22895		-1.0	-5.1	tyrosine recombinase XerD
PS417_02690		-1.0	-3.4	N-acylglucosamine 2-epimerase
PS417_17560		-1.0	-1.8	Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data)
PS417_05095		-1.0	-3.0	membrane protein
PS417_11360		-1.0	-2.0	energy transducer TonB
PS417_00825		-1.0	-2.1	recombinase RecF
PS417_01645		-1.0	-1.7	cupin
PS417_14235		-1.0	-2.1	hypothetical protein
PS417_17680		-1.0	-1.6	ABC transporter
PS417_26340		-1.0	-3.5	betaine-aldehyde dehydrogenase
PS417_19275		-1.0	-0.7	hypothetical protein
PS417_01620		-1.0	-1.2	preprotein translocase subunit SecB
PS417_21395		-1.0	-4.6	radical SAM protein
PS417_15370		-1.0	-1.7	kinase
PS417_11430		-1.0	-4.2	EamA
PS417_05025		-1.0	-1.1	maleylacetoacetate isomerase
PS417_21865		-1.0	-2.1	hypothetical protein
PS417_00195		-1.0	-1.3	hypothetical protein
PS417_22875		-1.0	-1.1	hypothetical protein
PS417_02560		-1.0	-0.8	23S rRNA methyltransferase
PS417_15200		-0.9	-2.1	protein activator of alkane oxidation PraB
PS417_27245		-0.9	-2.2	aminotransferase DegT
PS417_10695		-0.9	-2.2	decarboxylase
PS417_14940		-0.9	-1.0	LysR family transcriptional regulator
PS417_02975		-0.9	-2.0	3-dehydroquinate dehydratase
PS417_11400		-0.9	-0.8	phosphoglycerate mutase
PS417_12280		-0.9	-1.2	MerR family transcriptional regulator
PS417_00535		-0.9	-1.1	Holliday junction resolvase
PS417_06540		-0.9	-1.1	membrane protein
PS417_03785		-0.9	-1.3	pilus assembly protein PilV
PS417_19955		-0.9	-1.0	hypothetical protein
PS417_26420		-0.9	-0.9	hypothetical protein
PS417_04015		-0.9	-2.1	choline ABC transporter permease
PS417_12525		-0.9	-1.5	hypothetical protein
PS417_23375		-0.9	-1.2	cytochrome C oxidase
PS417_04375		-0.9	-1.0	ABC transporter ATP-binding protein
PS417_08580		-0.9	-2.5	histidine kinase
PS417_14120		-0.9	-3.4	molybdenum ABC transporter permease
PS417_04390		-0.9	-1.1	toluene tolerance protein
PS417_05595		-0.9	-3.4	ornithine carbamoyltransferase
PS417_18205		-0.9	-0.9	aldehyde dehydrogenase
PS417_10265		-0.9	-1.2	peptidase
PS417_17440		-0.9	-1.2	beta-lactamase
PS417_26175		-0.9	-0.5	sarcosine oxidase subunit gamma
PS417_05695		-0.9	-2.7	transcriptional regulator
PS417_01030		-0.9	-0.9	glutamine ABC transporter substrate-binding protein
PS417_27915		-0.9	-2.2	type VI secretion system protein ImpM
PS417_17470		-0.9	-0.9	LuxR family transcriptional regulator
PS417_00080		-0.9	-3.7	potassium transporter peripheral membrane component
PS417_18635		-0.9	-1.6	4-hydroxybenzoyl-CoA thioesterase
PS417_26240		-0.9	-1.4	N-methylproline demethylase
PS417_13990		-0.8	-1.5	LysR family transcriptional regulator
PS417_10275		-0.8	-1.3	histidine kinase
PS417_24935		-0.8	-0.6	hypothetical protein
PS417_13265		-0.8	-3.8	peptide synthetase
PS417_09880		-0.8	-1.9	hypothetical protein
PS417_20030		-0.8	-1.4	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
PS417_11055		-0.8	-1.8	AraC family transcriptional regulator
PS417_05820		-0.8	-1.3	recombinase RecX
PS417_15665		-0.8	-1.1	hypothetical protein
PS417_25275		-0.8	-1.8	hypothetical protein
PS417_04865		-0.8	-1.3	molybdenum cofactor biosynthesis protein MoaC
PS417_19475		-0.8	-3.7	pseudouridine synthase
PS417_13885		-0.8	-1.6	chemotaxis protein CheY
PS417_13165		-0.8	-1.3	peroxidase
PS417_14600		-0.8	-1.5	bleomycin resistance protein
PS417_00510		-0.8	-0.6	membrane protein
PS417_23390		-0.8	-3.6	ubiquinol oxidase subunit II
PS417_21000		-0.8	-0.9	CrfX protein
PS417_24650		-0.8	-1.0	membrane protein
PS417_15465		-0.8	-1.6	carboxynorspermidine decarboxylase
PS417_14140		-0.8	-1.2	membrane protein
PS417_09420		-0.8	-0.9	LysR family transcriptional regulator
PS417_21420		-0.8	-6.2	aminodeoxychorismate lyase
PS417_01815		-0.8	-1.6	peptide ABC transporter ATP-binding protein
PS417_23590		-0.8	-2.3	bleomycin resistance protein
PS417_21955		-0.8	-1.5	dehydrogenase
PS417_09885		-0.8	-2.1	hypothetical protein
PS417_27665		-0.8	-2.7	diguanylate cyclase
PS417_06770		-0.8	-3.3	multidrug transporter
PS417_04385		-0.8	-1.5	organic solvent ABC transporter substrate-binding protein
PS417_03380		-0.8	-0.7	hypothetical protein
PS417_27555		-0.8	-2.0	DNA-binding protein
PS417_04020		-0.8	-3.1	glycine/betaine ABC transporter substrate-binding protein
PS417_20170		-0.8	-1.6	hypothetical protein
PS417_18445		-0.8	-1.6	glycerol-3-phosphatase

Specific Phenotypes

For 3 genes in this experiment