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Experiment set20IT070 for
Pseudomonas simiae WCS417
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Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant
200 most important genes:
gene
name
fitness
t score
description
PS417
_23545
-4.9
-2.4
gamma-glutamyl kinase
compare
PS417
_22565
-4.5
-1.1
formyltetrahydrofolate deformylase
compare
PS417
_11705
-4.2
-6.5
cyclic peptide transporter
compare
PS417
_27795
-4.0
-1.0
orotate phosphoribosyltransferase
compare
PS417
_27300
-3.8
-0.9
cell division protein ZapA
compare
PS417
_23775
-3.8
-2.5
exodeoxyribonuclease V subunit beta
compare
PS417
_26605
-3.7
-1.3
malonate decarboxylase subunit beta
compare
PS417
_23170
-3.7
-1.8
FeS assembly protein IscX
compare
PS417
_03100
-3.5
-1.2
pilus assembly protein
compare
PS417
_03455
-3.4
-2.0
type III secretion protein
compare
PS417
_24745
-3.3
-1.7
gamma-glutamyl phosphate reductase
compare
PS417
_01915
-3.2
-0.8
ATP-dependent protease ATP-binding subunit HslU
compare
PS417
_06680
-2.3
-6.9
nuclease PIN
compare
PS417
_06865
-2.2
-2.7
transporter
compare
PS417
_27940
-2.2
-1.6
type VI secretion protein
compare
PS417
_07640
-2.2
-2.1
glyceraldehyde-3-phosphate dehydrogenase
compare
PS417
_09470
-2.2
-1.2
hypothetical protein
compare
PS417
_23770
-2.1
-1.1
exodeoxyribonuclease V subunit alpha
compare
PS417
_04650
-2.1
-0.7
D-alanine--D-alanine ligase
compare
PS417
_26990
-2.1
-0.7
RNA pyrophosphohydrolase
compare
PS417
_04385
-2.1
-2.7
organic solvent ABC transporter substrate-binding protein
compare
PS417
_06600
-2.1
-0.9
leucine/isoleucine/valine transporter ATP-binding subunit
compare
PS417
_26730
-2.1
-0.7
pyrroline-5-carboxylate reductase
compare
PS417
_24500
-2.1
-2.8
DEAD/DEAH box helicase
compare
PS417
_16555
-2.1
-1.5
cupin
compare
PS417
_27870
-2.0
-2.4
ATP-dependent DNA helicase RecG
compare
PS417
_02885
-2.0
-1.8
hypothetical protein
compare
PS417
_25225
-2.0
-1.7
MFS transporter
compare
PS417
_21630
-2.0
-1.8
magnesium transporter
compare
PS417
_01605
-1.9
-0.9
phosphoglycerate mutase
compare
PS417
_23580
-1.9
-1.3
peptidylprolyl isomerase
compare
PS417
_13250
-1.9
-3.7
ABC transporter
compare
PS417
_26850
-1.8
-0.8
twin-arginine translocation pathway signal protein
compare
PS417
_27195
-1.8
-1.1
N-acetylglutamate synthase
compare
PS417
_07565
-1.8
-1.4
hypothetical protein
compare
PS417
_20160
-1.7
-2.1
cysteine synthase
compare
PS417
_23950
-1.7
-1.2
polynucleotide phosphorylase/polyadenylase
compare
PS417
_16510
-1.7
-2.9
Clp protease ClpX
compare
PS417
_06145
-1.7
-0.9
hypothetical protein
compare
PS417
_22450
-1.7
-0.9
ATP-dependent DNA helicase RuvA
compare
PS417
_10265
-1.7
-1.8
peptidase
compare
PS417
_21125
-1.7
-3.8
phosphoadenosine phosphosulfate reductase
compare
PS417
_21655
-1.6
-1.0
aspartate kinase
compare
PS417
_20855
-1.6
-1.0
hypothetical protein
compare
PS417
_13620
-1.6
-1.4
thermostable hemolysin
compare
PS417
_06445
-1.6
-1.8
iron-siderophore ABC transporter permease
compare
PS417
_01920
-1.6
-0.7
ATP-dependent protease subunit HslV
compare
PS417
_20610
-1.6
-1.2
hypothetical protein
compare
PS417
_13290
-1.6
-2.7
AraC family transcriptional regulator
compare
PS417
_00650
-1.6
-0.7
LysR family transcriptional regulator
compare
PS417
_23380
-1.6
-2.6
cytochrome o ubiquinol oxidase subunit III
compare
PS417
_19425
-1.6
-0.8
allantoicase
compare
PS417
_00160
-1.6
-2.8
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
compare
PS417
_21855
-1.6
-2.6
hypothetical protein
compare
PS417
_02720
-1.6
-0.8
TetR family transcriptional regulator
compare
PS417
_08170
-1.5
-7.4
capsular biosynthesis protein
compare
PS417
_03260
-1.5
-0.9
5S ribosomal RNA
compare
PS417
_01580
-1.5
-1.3
imidazole glycerol phosphate synthase
compare
PS417
_02990
-1.5
-2.1
hypothetical protein
compare
PS417
_01270
-1.5
-1.4
iron ABC transporter substrate-binding protein
compare
PS417
_17215
-1.4
-1.8
peptidylprolyl isomerase
compare
PS417
_08685
-1.4
-0.9
flagellar hook-length control protein FliK
compare
PS417
_25270
-1.4
-1.9
NrdR family transcriptional regulator
compare
PS417
_03560
-1.4
-1.1
GTP-binding protein
compare
PS417
_04180
-1.4
-1.9
GntR family transcriptional regulator
compare
PS417
_08230
-1.4
-1.6
lipopolysaccharide biosynthesis protein RfbH
compare
PS417
_13855
-1.3
-0.9
acetyl-CoA acetyltransferase
compare
PS417
_04875
-1.3
-0.9
molybdenum cofactor biosynthesis protein MoaE
compare
PS417
_23915
-1.3
-2.9
pantoate--beta-alanine ligase
compare
PS417
_04865
-1.3
-2.1
molybdenum cofactor biosynthesis protein MoaC
compare
PS417
_10405
-1.3
-0.8
filamentous hemagglutinin
compare
PS417
_05445
-1.3
-1.0
DNA mismatch repair protein MutT
compare
PS417
_19620
-1.3
-1.3
hypothetical protein
compare
PS417
_27135
-1.3
-0.5
glutamine synthetase
compare
PS417
_05100
-1.2
-1.4
RNA polymerase sigma factor
compare
PS417
_09590
-1.2
-2.9
membrane protein
compare
PS417
_17900
-1.2
-1.8
transcriptional regulator
compare
PS417
_22520
-1.2
-1.2
histidine kinase
compare
PS417
_02415
-1.2
-2.8
phosphoserine phosphatase
compare
PS417
_16490
-1.2
-0.9
cell division protein FtsK
compare
PS417
_05570
-1.2
-2.8
DeoR faimly transcriptional regulator
compare
PS417
_14075
-1.2
-1.3
hypothetical protein
compare
PS417
_11340
-1.2
-2.3
prevent-host-death protein
compare
PS417
_20725
-1.2
-1.2
cbb3-type cytochrome c oxidase subunit II
compare
PS417
_10275
-1.2
-1.7
histidine kinase
compare
PS417
_02255
-1.2
-1.6
lipopolysaccharide kinase
compare
PS417
_15710
-1.2
-1.6
nitrate reductase
compare
PS417
_10245
-1.2
-1.2
hypothetical protein
compare
PS417
_25645
-1.2
-2.9
peptidase M23
compare
PS417
_26370
-1.2
-2.3
RNA helicase
compare
PS417
_23105
-1.1
-1.0
hypothetical protein
compare
PS417
_13255
-1.1
-1.5
ABC transporter
compare
PS417
_06635
-1.1
-0.9
ferredoxin
compare
PS417
_13075
-1.1
-1.1
hypothetical protein
compare
PS417
_16000
-1.1
-1.4
chemotaxis protein CheY
compare
PS417
_13140
-1.1
-1.0
oxidoreductase
compare
PS417
_12325
-1.1
-2.1
precorrin-4 C11-methyltransferase
compare
PS417
_18755
-1.1
-1.0
CrtK
compare
PS417
_07635
-1.1
-6.1
transcription-repair coupling factor
compare
PS417
_02270
-1.1
-2.7
carbamoyltransferase
compare
PS417
_25915
-1.1
-2.2
carbon-nitrogen hydrolase
compare
PS417
_19780
-1.1
-3.2
anti-anti-sigma factor
compare
PS417
_08580
-1.1
-2.7
histidine kinase
compare
PS417
_01095
-1.1
-0.9
amino acid ABC transporter ATP-binding protein
compare
PS417
_24620
-1.1
-2.0
hypothetical protein
compare
PS417
_07870
-1.1
-1.6
hypothetical protein
compare
PS417
_04025
-1.1
-3.9
glycine/betaine ABC transporter permease
compare
PS417
_05345
-1.1
-2.5
exotoxin
compare
PS417
_07710
-1.1
-3.0
membrane protein
compare
PS417
_26530
-1.1
-0.8
hypothetical protein
compare
PS417
_00535
-1.1
-1.7
Holliday junction resolvase
compare
PS417
_05130
-1.1
-1.3
glutaredoxin
compare
PS417
_12355
-1.1
-1.4
magnesium chelatase
compare
PS417
_21395
-1.1
-4.3
radical SAM protein
compare
PS417
_22945
-1.1
-1.4
phosphoribosylglycinamide formyltransferase
compare
PS417
_14120
-1.1
-4.6
molybdenum ABC transporter permease
compare
PS417
_26260
-1.1
-1.1
hypothetical protein
compare
PS417
_05815
-1.0
-2.6
recombinase RecA
compare
PS417
_27425
-1.0
-4.5
exopolyphosphatase
compare
PS417
_19955
-1.0
-1.2
hypothetical protein
compare
PS417
_13260
-1.0
-4.2
pyochelin synthetase
compare
PS417
_07820
-1.0
-1.6
transposase
compare
PS417
_08670
-1.0
-2.1
molybdopterin biosynthesis protein B
compare
PS417
_02485
-1.0
-2.5
tRNA delta(2)-isopentenylpyrophosphate transferase
compare
PS417
_04290
-1.0
-1.9
hypothetical protein
compare
PS417
_12870
-1.0
-1.0
enoyl-CoA hydratase
compare
PS417
_21360
-1.0
-0.7
termination factor Rho
compare
PS417
_05905
-1.0
-1.4
hypothetical protein
compare
PS417
_23475
-1.0
-0.8
hypothetical protein
compare
PS417
_16045
-1.0
-1.9
acyl-CoA dehydrogenase
compare
PS417
_12035
-1.0
-1.4
dihydroxyacetone kinase
compare
PS417
_22015
-1.0
-2.4
hypothetical protein
compare
PS417
_26010
-1.0
-3.3
amidophosphoribosyltransferase
compare
PS417
_16195
-1.0
-0.6
AraC family transcriptional regulator
compare
PS417
_00975
-1.0
-0.9
hypothetical protein
compare
PS417
_21875
-1.0
-2.2
AraC family transcriptional regulator
compare
PS417
_15215
-1.0
-1.1
protein activator of alkane oxidation PraA
compare
PS417
_23095
-1.0
-0.6
exodeoxyribonuclease
compare
PS417
_11400
-1.0
-0.9
phosphoglycerate mutase
compare
PS417
_22205
-1.0
-4.2
potassium transporter TrkH
compare
PS417
_12690
-1.0
-2.5
xylulose kinase
compare
PS417
_02805
-1.0
-0.9
urease subunit gamma
compare
PS417
_25765
-1.0
-1.1
transcriptional regulator
compare
PS417
_11230
-1.0
-2.3
hydroxyacid dehydrogenase
compare
PS417
_06375
-1.0
-0.5
deoxycytidine triphosphate deaminase
compare
PS417
_21850
-1.0
-0.8
LysR family transcriptional regulator
compare
PS417
_14115
-1.0
-3.1
molybdate ABC transporter substrate-binding protein
compare
PS417
_14270
-1.0
-3.4
phosphate ABC transporter substrate-binding protein
compare
PS417
_06780
-1.0
-1.7
TetR family transcriptional regulator
compare
PS417
_12775
-0.9
-2.4
GntR family transcriptional regulator
compare
PS417
_11810
-0.9
-1.5
oxidoreductase
compare
PS417
_09915
-0.9
-0.8
hypothetical protein
compare
PS417
_02770
-0.9
-1.2
membrane protein
compare
PS417
_15665
-0.9
-1.1
hypothetical protein
compare
PS417
_02870
-0.9
-3.1
TonB-dependent receptor
compare
PS417
_04015
-0.9
-1.9
choline ABC transporter permease
compare
PS417
_16320
-0.9
-1.5
protein tyrosine phosphatase
compare
PS417
_00385
-0.9
-0.5
Fur family transcriptional regulator
compare
PS417
_05695
-0.9
-1.8
transcriptional regulator
compare
PS417
_06490
-0.9
-2.0
hypothetical protein
compare
PS417
_10395
-0.9
-3.3
amidase
compare
PS417
_20310
-0.9
-1.3
hypothetical protein
compare
PS417
_04020
-0.9
-4.3
glycine/betaine ABC transporter substrate-binding protein
compare
PS417
_22300
-0.9
-0.7
LTXXQ domain protein
compare
PS417
_14065
-0.9
-3.0
UTP--glucose-1-phosphate uridylyltransferase
compare
PS417
_24370
-0.9
-0.5
(2Fe-2S)-binding protein
compare
PS417
_01620
-0.9
-0.9
preprotein translocase subunit SecB
compare
PS417
_14140
-0.9
-1.1
membrane protein
compare
PS417
_10345
-0.9
-2.3
MFS transporter
compare
PS417
_09910
-0.9
-1.4
gifsy-1 prophage protein
compare
PS417
_16515
-0.9
-1.8
Clp protease ClpS
compare
PS417
_23015
-0.9
-1.7
NGG1p interacting factor 3 protein, NIF3
compare
PS417
_22870
-0.9
-1.5
lipoprotein
compare
PS417
_26755
-0.9
-1.0
nucleoside-triphosphate diphosphatase
compare
PS417
_02370
-0.9
-0.9
ADP-ribose pyrophosphatase
compare
PS417
_20045
-0.9
-3.6
threonine-phosphate decarboxylase
compare
PS417
_16845
-0.9
-1.5
monovalent cation/H+ antiporter subunit E
compare
PS417
_08245
-0.9
-0.6
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase
compare
PS417
_24315
-0.9
-2.5
catalase
compare
PS417
_10870
-0.9
-1.6
GABA permease
compare
PS417
_12505
-0.9
-2.5
peptidase
compare
PS417
_06245
-0.9
-0.8
zinc metallopeptidase RseP
compare
PS417
_26175
-0.9
-0.5
sarcosine oxidase subunit gamma
compare
PS417
_08665
-0.9
-2.5
molybdopterin-guanine dinucleotide biosynthesis protein A
compare
PS417
_13145
-0.9
-0.9
50S ribosomal protein L21
compare
PS417
_12005
-0.9
-1.5
hypothetical protein
compare
PS417
_27245
-0.8
-1.9
aminotransferase DegT
compare
PS417
_10435
-0.8
-2.6
serine/threonine protein kinase
compare
PS417
_16735
-0.8
-2.1
aldehyde dehydrogenase
compare
PS417
_14260
-0.8
-1.6
phosphate ABC transporter permease
compare
PS417
_03145
-0.8
-1.1
acetyl-CoA acetyltransferase
compare
PS417
_21990
-0.8
-1.2
LacI family transcriptional regulator
compare
PS417
_10480
-0.8
-1.3
glutathione S-transferase
compare
PS417
_21830
-0.8
-1.9
TetR family transcriptional regulator
compare
PS417
_03525
-0.8
-0.9
hypothetical protein
compare
PS417
_24430
-0.8
-0.8
3-dehydroquinate dehydratase
compare
PS417
_23485
-0.8
-1.8
antibiotic biosynthesis monooxygenase
compare
PS417
_28220
-0.8
-1.2
LysR family transcriptional regulator
compare
PS417
_28145
-0.8
-1.4
AraC family transcriptional regulator
compare
PS417
_07770
-0.8
-0.9
hypothetical protein
compare
Specific Phenotypes
For 1 genes in this experiment