Experiment set20IT049 for Pseudomonas simiae WCS417

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Genes with specific phenotypes:

  gene name fitness t score description  
PS417_17290 -5.9 -9.7 RND transporter compare
PS417_17300 -4.0 -5.4 RND transporter compare
PS417_22845 -3.9 -17.4 membrane protein conserved
PS417_04105 -3.3 -12.8 ABC transporter ATP-binding protein compare
PS417_08415 -2.8 -8.0 hypothetical protein compare
PS417_09225 -2.0 -5.6 C4-dicarboxylate ABC transporter compare
PS417_14560 -1.9 -7.5 TonB-dependent receptor compare
PS417_17785 -1.8 -6.4 4-amino-4-deoxy-L-arabinose transferase compare
PS417_05110 -1.7 -7.4 peptidase conserved
PS417_02530 -1.6 -6.0 iron ABC transporter substrate-binding protein conserved
PS417_28350 -1.6 -5.4 fatty acid methyltransferase conserved
PS417_02525 -1.5 -6.4 iron ABC transporter permease conserved
PS417_00515 -1.5 -5.9 membrane protein compare
PS417_27465 -1.3 -6.7 cystathionine gamma-synthase compare
PS417_24380 +1.1 5.5 guanine permease compare
PS417_03160 +1.2 5.3 metal ABC transporter ATPase compare
PS417_04310 +1.2 5.1 hypothetical protein compare
PS417_04495 +1.2 6.2 LITAF-like zinc ribbon domain containing protein compare
PS417_12560 +1.3 6.1 MFS transporter compare
PS417_04755 +1.3 5.4 membrane protein compare
PS417_12200 +1.4 8.2 microcin ABC transporter permease conserved
PS417_00245 +1.4 7.8 oligopeptidase A compare
PS417_04745 +1.5 5.5 fusaric acid resistance protein compare
PS417_12205 +1.5 6.9 hypothetical protein conserved
PS417_16475 +1.6 5.6 camphor resistance protein CrcB compare
PS417_20595 +1.7 8.5 hypothetical protein compare
PS417_12190 +1.8 8.8 microcin ABC transporter ATP-binding protein conserved
PS417_16980 +1.9 9.7 exonuclease III compare
PS417_21710 +2.0 6.4 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
PS417_27130 +2.0 8.2 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
PS417_14480 +2.0 8.0 glycogen synthase compare
PS417_12395 +2.1 9.5 aminopeptidase N compare
PS417_05095 +2.1 9.4 membrane protein compare
PS417_27505 +2.2 7.1 transcriptional regulator compare
PS417_12585 +2.3 11.8 acriflavine resistance protein B compare
PS417_20790 +2.4 7.4 adenine phosphoribosyltransferase compare
PS417_01340 +2.4 7.6 agmatine deiminase compare
PS417_04740 +2.5 8.4 RND transporter compare
PS417_22500 +2.6 18.1 porin compare
PS417_19945 +2.7 9.7 MarR family transcriptional regulator compare
PS417_04750 +3.0 6.0 hypothetical protein compare
PS417_14835 +3.2 6.4 amidase compare
PS417_22715 +3.7 17.7 heme oxygenase compare
PS417_04735 +4.3 17.2 LysR family transcriptional regulator conserved
PS417_23830 +5.1 27.2 hypothetical protein compare
PS417_25320 +5.2 17.0 dTDP-4-dehydrorhamnose reductase compare
PS417_22700 +5.5 19.6 RNA polymerase subunit sigma-24 conserved
PS417_01355 +7.6 31.4 membrane protein compare


Specific phenotypes for supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms