Experiment set20IT048 for Pseudomonas simiae WCS417

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Genes with specific phenotypes:

  gene name fitness t score description  
PS417_11820 -6.3 -5.1 histidine kinase compare
PS417_17290 -3.9 -13.0 RND transporter compare
PS417_17300 -3.4 -8.4 RND transporter compare
PS417_17295 -2.8 -7.0 RND transporter MFP subunit compare
PS417_22845 -2.8 -16.3 membrane protein conserved
PS417_04690 -2.7 -5.8 transcriptional regulator compare
PS417_04105 -2.2 -13.6 ABC transporter ATP-binding protein compare
PS417_08415 -1.7 -9.6 hypothetical protein compare
PS417_17285 -1.7 -6.6 hypothetical protein compare
PS417_09225 -1.6 -7.4 C4-dicarboxylate ABC transporter compare
PS417_17785 -1.6 -7.5 4-amino-4-deoxy-L-arabinose transferase compare
PS417_26715 -1.4 -7.0 peptidase P60 conserved
PS417_02525 -1.3 -6.5 iron ABC transporter permease conserved
PS417_02530 -1.2 -6.4 iron ABC transporter substrate-binding protein conserved
PS417_14560 -1.2 -5.8 TonB-dependent receptor compare
PS417_13250 -1.1 -5.4 ABC transporter compare
PS417_27465 -1.1 -6.2 cystathionine gamma-synthase compare
PS417_20020 -1.0 -6.7 cobalamin synthase compare
PS417_27130 +1.1 5.9 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
PS417_04735 +1.5 5.7 LysR family transcriptional regulator conserved
PS417_22500 +1.5 10.4 porin compare
PS417_19945 +2.6 6.8 MarR family transcriptional regulator compare
PS417_23830 +3.5 19.4 hypothetical protein compare
PS417_25320 +5.2 31.3 dTDP-4-dehydrorhamnose reductase compare
PS417_01355 +7.5 28.4 membrane protein compare


Specific phenotypes for supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms